Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq15 154 3e-32
seq6 89.7 9e-13
seq20 84.2 4e-11
>seq15
Length=11516971
Score = 154 bits (170), Expect = 3e-32
Identities = 167/219 (76%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| || | ||| || |||||||| || |||||||| || |||||||| || |
Sbjct 2476755 AGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 2476814
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | |||||| || || || || || || || || || || ||||||||||||
Sbjct 2476815 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCC 2476874
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGT 68422
||||| || ||||| ||||| ||| ||| |||||||| ||| | || || || | ||
Sbjct 2476875 TTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTC-GCTGGGCTCCACCTCAAGAGT 2476933
Query 68423 GATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||||| || || || ||||| || || || ||||||||
Sbjct 2476934 GATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 2476972
Score = 154 bits (170), Expect = 3e-32
Identities = 167/219 (76%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| || | ||| || |||||||| || |||||||| || |||||||| || |
Sbjct 2476983 AGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 2477042
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | |||||| || || || || || || || || || || ||||||||||||
Sbjct 2477043 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCC 2477102
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGT 68422
||||| || ||||| ||||| ||| ||| |||||||| ||| | || || || | ||
Sbjct 2477103 TTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTC-GCTGGGCTCCACCTCAAGAGT 2477161
Query 68423 GATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||||| || || || ||||| || || || ||||||||
Sbjct 2477162 GATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 2477200
Score = 154 bits (170), Expect = 3e-32
Identities = 167/219 (76%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| || | ||| || |||||||| || |||||||| || |||||||| || |
Sbjct 2477211 AGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 2477270
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | |||||| || || || || || || || || || || ||||||||||||
Sbjct 2477271 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCC 2477330
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGT 68422
||||| || ||||| ||||| ||| ||| |||||||| ||| | || || || | ||
Sbjct 2477331 TTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTC-GCTGGGCTCCACCTCAAGAGT 2477389
Query 68423 GATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||||| || || || ||||| || || || ||||||||
Sbjct 2477390 GATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 2477428
Score = 145 bits (160), Expect = 1e-29
Identities = 163/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| || | ||| || |||||||| || |||||||| || |||||||| || |
Sbjct 2477439 AGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 2477498
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | |||||| || || || || || || || || || || ||||||||||||
Sbjct 2477499 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCC 2477558
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
||||| || ||||| ||||| || ||| |||||||| | || || || | |||
Sbjct 2477559 TTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCAAGAGTG 2477618
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| || || || ||||| || || || ||||||||
Sbjct 2477619 ATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 2477656
>seq6
Length=9412079
Score = 89.7 bits (98), Expect = 9e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317
||| || ||||||| | |||||||| || |||||| | | |||||| || | |||
Sbjct 6657161 GTGGAGGGTGGACTTCATCTGGATGTTGTAGGTGGAGAGGGCGCACCCATCCTCAAGCTG 6657102
Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377
||| || || | || || | || || || || || || || ||||| || || |||||
Sbjct 6657101 CTTACCAGCATAGATCAGACACTGCTGATCAGGAGGGATCCCCTCCTTATCATGGATCTT 6657042
Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437
|||||| | | ||| |||| | ||| || | || ||||||| || || ||
Sbjct 6657041 GACCTTGATATTCACAATGCTGTCATTGGGTTCCACATTCAGACTGATGGTCTTGCCAGT 6656982
Query 68438 GAGGGTCTTGACGAATATCTGCAT 68461
|||||||| || |||||||||||
Sbjct 6656981 CAGGGTCTTCACAAATATCTGCAT 6656958
Score = 89.7 bits (98), Expect = 9e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317
||| || ||| |||| || |||||||| || || ||||| || || || | | |||
Sbjct 6657389 GTGGAGGGTGAACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGTGGCCGTCCTGCAGCTG 6657330
Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377
||| || || || ||||| | || || || || || || || ||||| || || |||||
Sbjct 6657329 CTTGCCAGCAAAGATGAGACGCTGCTGATCAGGAGGGATCCCCTCCTTATCATGGATCTT 6657270
Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437
|||||| | | ||| |||| | ||| || | || ||||||| || | ||
Sbjct 6657269 GACCTTGATATTCACAATGCTGTCATTGGGTTCCACATTCAGACTGATGGTCTTGTCAGT 6657210
Query 68438 GAGGGTCTTGACGAATATCTGCAT 68461
|||||||| || |||||||||||
Sbjct 6657209 CAGGGTCTTCACAAATATCTGCAT 6657186
>seq20
Length=13411851
Score = 84.2 bits (92), Expect = 4e-11
Identities = 83/105 (79%), Gaps = 2/105 (2%)
Strand=Plus/Plus
Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTC 68416
|||||||| || || |||||||||||||| ||||| ||||| ||| | || || ||
Sbjct 10779675 CCTTCCTTATCCTGGATCTTTGCCTTGACATTTTCGATCGTGTC-GCTGGGCTCCACCTC 10779733
Query 68417 CAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
| ||||||||| |||||||| | ||||| ||||| ||||||||
Sbjct 10779734 GAGGGTGATGGTCTTTCCCGTCAACGTCTTCACGAAGATCTGCAT 10779778
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921543658886200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |