Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq11 387 3e-102
seq1226 127 4e-24
seq15 109 1e-18
seq12 102 2e-16
seq1114 84.2 4e-11
>seq11
Length=11238946
Score = 387 bits (428), Expect = 3e-102
Identities = 958/1442 (66%), Gaps = 54/1442 (4%)
Strand=Plus/Plus
Query 244010 GAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCC 244069
|| || ||||| ||||||||| | ||||| |||||||||| ||| | ||||
Sbjct 5178207 GATCCGTTGTGAGCGATGAGCTTATTTTTCATGTCCTCGTTCCACAACCCC---CTCTCC 5178263
Query 244070 ---AGCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGC 244126
|| | | || ||||| ||| || | ||| ||||| || ||||| || | |||
Sbjct 5178264 GTCAGGTCTTTGAGGAGGTGAGGGTTGACAATCTGGAACTCCCCGGACAGGACCCTGCGG 5178323
Query 244127 TGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTG 244186
||||| ||||||| || | ||||| ||| |||||||||| ||||| || ||
Sbjct 5178324 GTGTAGATGTTGCTGGTGTAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGGGCGGTT 5178383
Query 244187 CTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGG 244246
|| || ||||| || | | |||||||||||||||||||||||| | |||
Sbjct 5178384 GAGGCGGTGGGCATCGGGGCTAAGAGCAGACTGTTCCTCACGCCGTGCTTGGCGATTTTT 5178443
Query 244247 AGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAG-GTCCTCGCGTTTGAGGCCCCACAT 244305
| ||| ||||||||| ||| | | | | | ||| || | ||||||
Sbjct 5178444 TCCTTTAGCAGCTTCCAGTCCAACAGGTCGGTGGGCGTCTTCTC----------CCACAT 5178493
Query 244306 GTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTC 244365
||| |||| || | ||||||||||| ||| ||| |||||||| ||| || |||
Sbjct 5178494 GTCGTACTGAAGGATGCCCTTGCTGACCGGGGAGCCTTCGTAGGTTTCGTATGGCCCGA- 5178552
Query 244366 GCGCTGG-GCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCA 244424
|| | | ||||||| |||||| | |||||||| ||||||||||||||||||||||||
Sbjct 5178553 GCTCGGCAGCCAGCTCGCAGCTCGCCTCGAGGGCTGCGTAGTAGATGGTCTCGAAGATCT 5178612
Query 244425 TCTTGTTCATGTCGCGGGCCTT-GCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACG 244483
|||||| | || | ||| | || ||| ||| | ||| | ||||| ||
Sbjct 5178613 GGGTGTTCA-GAAGCTGAGCTTCGGGGCTTTCGAACGGGTAACGCATGAGGATGAATGCG 5178671
Query 244484 TCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCT 244543
||||||| ||||| || ||||| || || || ||||| ||||||||||| | |||
Sbjct 5178672 TCGGCCAAACCCTGGACACCGATTCCTATTGGCCTGTGGCGCTTGTTGGACTTCTCAGCT 5178731
Query 244544 TCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGG 244603
|||||||| || || | || || || | |||||| | ||| ||| ||
Sbjct 5178732 TCGGGCACTGGATAGTAATTAATATCTATGATCTTGTTCAAGTTTT---TGA-CA----- 5178782
Query 244604 ACGACGTCGGCCAGCAGCTGAAAGTCGT----ACTCGTAGGGATCCTCGGCGATGGTGAT 244659
|| || | || || |||| | ||| | | || | | ||| ||| ||
Sbjct 5178783 ACTACCTTGGTCA-CAGCAGCTAGTTTTTGAAAGTCAAAAGTCCGCTCAGCGGTG----- 5178836
Query 244660 CCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTT 244719
|| || |||||| |||||| |||||| || || || || ||||| || | |
Sbjct 5178837 ----ACGTACATGTTGAGTGCGACGGAGGCCAGATTACAAACCGCTACCTCGTCGCTGCT 5178892
Query 244720 GGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTG 244779
|||||| | ||||| || ||||| || || |||| ||||||||||||||| | ||| ||
Sbjct 5178893 GGTGTATTCCACAATTTCTGTGCATAGATTGCTGCTCTTGATGGTGCCCAGATTCTGCTG 5178952
Query 244780 ATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTG 244839
||| ||| |||||||| || |||||||||||| | || ||||| || |||
Sbjct 5178953 GTTGCTCTTCCTATTGCAGGCATCTTTGTAGAGCATGTATGGAGTGCCGGTTTCAGTCTG 5179012
Query 244840 GGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCT- 244898
|| | | || | | ||| | | | ||||| ||| | || | | | |||
Sbjct 5179013 GGACTCTATGATGGCATGCCAAACCTGCTGGGCCTTCACCACAC-GCTTGACGCGGCCTT 5179071
Query 244899 CTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGG 244958
|| |||||| |||||| || ||| ||||| |||||| ||| | || ||||
Sbjct 5179072 CTTTCTCGTATTTGGTGTAGAGCTTCTCAAACTCCTCCCCCCAGCACTCATTCAGCCCGG 5179131
Query 244959 GGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGA 245018
| || | || ||||| ||| ||| || | || ||||||| |||||| |
Sbjct 5179132 GACATTCGTCTGGACACATTAGAGACCAGTCCTGGTTACTCTCCACCCTCTTCATGAACA 5179191
Query 245019 GGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGT 245078
||| |||||||| | | | ||| ||||| |||| |||||||| || |||||||
Sbjct 5179192 AGTCAGGGATCCACATACCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCTTTTCCAGTGT 5179251
Query 245079 TCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGA 245138
||||| ||| ||||| |||||||| | ||| |||||||| |||| ||| | ||||
Sbjct 5179252 TCTTCTTCAACTCCAGGAAGTCAAATATATCGGAATGCCAGGGTTCCAGGTACATGGCGA 5179311
Query 245139 GGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG----CGTTGAAG 245194
|| || |||| |||||| || |||||||||| | | || ||| |||| |
Sbjct 5179312 AAGCCCCAGGCCTCTTGTTTCCACCCTGGTCCA----CATAGCGTGCGGTGTTGTTGTAA 5179367
Query 245195 ATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCC 245254
| | ||| | || || | || || |||| ||| |||||||| |||||| |||
Sbjct 5179368 ACTCTCAGCATGGGGACAAGCCCATTGGAGTTGCCATTGGTGCCAGCGATGTAACTTCCC 5179427
Query 245255 TTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCG 245314
| |||| | ||||| || || || | ||| || || |||||||||||| |||
Sbjct 5179428 GTAGATCTGATGCAGCTGACGGCCACACCGATTCCTCCAGCCGACTTGGAGATGAGCGCG 5179487
Query 245315 CAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAG 245374
|| || | ||||| |||||||| |||||||| ||||||| |||||| |||
Sbjct 5179488 CACTGTTTCAGCGTGTCATAAATGCCCTCGATGCTGTCATCCTTCATGGCGAGCAGGAAG 5179547
Query 245375 CAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTA 245434
||| ||||||||| ||| || | | | | || || || || ||| ||| |||||
Sbjct 5179548 CAGCTGGACAGCTGTGGCCTGTTGGTACCTGCATTAAAGAGTGTCGGGGAGGCATGGGTG 5179607
Query 245435 AA 245436
||
Sbjct 5179608 AA 5179609
>seq1226
Length=411779
Score = 127 bits (140), Expect = 4e-24
Identities = 106/127 (83%), Gaps = 2/127 (2%)
Strand=Plus/Plus
Query 42706 TGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCT 42765
||||||||||| | ||||| ||||| || |||||||| || |||| || ||||||||||
Sbjct 204519 TGGTAGCCTTTGCTGCCGTGGAGGGTATTTTCTTCTCTGGGTCCTTTGCTTCCATCTTCT 204578
Query 42766 GGCTCAAGCAGAAGGTGTC-GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824
|||| ||| | |||| | | ||||||||| || |||||||| ||||| |||||||||||
Sbjct 204579 GGCTGAAG-AAAAGGGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATCAGCAGA 204637
Query 42825 GACGAGG 42831
|||||||
Sbjct 204638 GACGAGG 204644
Score = 84.2 bits (92), Expect = 4e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 43070 CCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCG 43129
|||||| ||||| |||||||||||||| ||||||| ||||||||||| || |||||| |
Sbjct 205433 CCCCTTTGACTTCATGGAGAACATCTCTCTGGAGGGAAAGACCAACTTCTTTGAGAAGAG 205492
Query 43130 CGTCGCCGACTACCAG 43145
|| | ||| ||||||
Sbjct 205493 GGTGGGCGAGTACCAG 205508
>seq15
Length=11516971
Score = 109 bits (120), Expect = 1e-18
Identities = 113/148 (76%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 244097 ACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATG 244156
||||||||||||||||| || || | |||| ||||| ||||||| || | |||||||
Sbjct 9311885 ACCTGAAACTCTCCCGAGAGAACCCTGCGCGTGTAGATGTTGCTGGTGTAGGCCTCGATG 9311944
Query 244157 CTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGA 244216
||| |||| ||||| ||||| || ||| || || |||||||| | || ||||||
Sbjct 9311945 GACTCGTTGTTCCCCAGGATCTGGGCGGTGGAGGCTGTGGGCATGGGAGCCAGCAGCAGG 9312004
Query 244217 CTGTTCCTCACGCCGTGCCTCTGGATGC 244244
|||||||| ||||| || || ||| ||
Sbjct 9312005 CTGTTCCTGACGCCATGTCTGAGGACGC 9312032
Score = 104 bits (114), Expect = 4e-17
Identities = 90/112 (80%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 244705 CACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGT 244764
|||||| || | | ||||||| |||||||| ||||| || || ||| | ||||||||
Sbjct 9312813 CACCTCATCTTTGCTCGTGTACTCTACAATCTCTGTGCACAGATTGCTGGATTTGATGGT 9312872
Query 244765 GCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATG 244816
|||||||| ||| || ||| ||| |||||||||||||||||||||||||
Sbjct 9312873 GCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATG 9312924
Score = 96.9 bits (106), Expect = 7e-15
Identities = 104/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 245011 CATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGA 245070
||| |||||||| |||||||| | || ||| || || |||| ||||||||| ||
Sbjct 9313271 CATAAAGAGGTCTGGGATCCACAAAGCGAAGAACAGATCTCTGGCCCTCTGCTCCTCTTT 9313330
Query 245071 GCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTA 245130
|||||||||||| ||||||||| || |||| || ||| ||||| ||||||| |||
Sbjct 9313331 GCCAGTGTTCTTTTTCAGCTCCAGGAACGCAAACACATCGGAATGCCACGGCTCCAGGTA 9313390
Query 245131 GACAGCGAGGGCGCCGGG 245148
||||| | ||| || ||
Sbjct 9313391 CACAGCAAAGGCTCCAGG 9313408
>seq12
Length=10661439
Score = 102 bits (112), Expect = 2e-16
Identities = 101/128 (79%), Gaps = 2/128 (2%)
Strand=Plus/Plus
Query 42705 CTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTC 42764
||||| || ||| | || || ||||||||||||||||| ||| | ||||| ||||||| |
Sbjct 1964149 CTGGTGGCATTTGCAGCAGTGGAGGGCATCTTCTTCTCTGGCTCGTTCGCGTCCATCTAC 1964208
Query 42765 TGGCTCAAGCAGAAGGTGTC-GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAG 42823
||||| ||| | |||| | | ||||| || ||||||| || || || |||||||||||
Sbjct 1964209 TGGCTGAAG-AAAAGGGGACTCATGCCGGGCCTCACCTATTCTAATGAGCTCATCAGCAG 1964267
Query 42824 GGACGAGG 42831
|| ||||
Sbjct 1964268 AGATGAGG 1964275
>seq1114
Length=2922
Score = 84.2 bits (92), Expect = 4e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 43070 CCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCG 43129
|||||| ||||| |||||||||||||| ||||||| ||||||||||| || |||||| |
Sbjct 171 CCCCTTTGACTTCATGGAGAACATCTCTCTGGAGGGAAAGACCAACTTCTTTGAGAAGAG 230
Query 43130 CGTCGCCGACTACCAG 43145
|| | ||| ||||||
Sbjct 231 GGTGGGCGAGTACCAG 246
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944258518019600
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