Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq10 82.4 7e-11 >seq10 Length=9126174 Score = 82.4 bits (90), Expect = 7e-11 Identities = 105/142 (74%), Gaps = 2/142 (1%) Strand=Plus/Minus Query 20527 GTACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCT 20586 |||| | || |||||||||||||||||||| ||||| ||||| |||| ||| |||||| Sbjct 6096147 GTACTCGGCACCAAAGTGCCTCCACTGGAACCCGTACACAGGGCCCAGATCTCCCTCCTC 6096088 Query 20587 TCTGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTT 20646 || || | || || | | |||| || |||| || || || ||||| ||||| Sbjct 6096087 TCGGTCGGTGAGCCCCAGATTGTCCAGAAAAGCCCTAGAACCGTTGGCTTCCCAAATCTT 6096028 Query 20647 GACTCCTGTTCT-TGAAAGCTC 20667 |||||| |||| ||| ||||| Sbjct 6096027 TACTCCT-TTCTCTGAGAGCTC 6096007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441335090211400