Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq11 203 4e-47 seq15 95.1 1e-14 >seq11 Length=11238946 Score = 203 bits (224), Expect = 4e-47 Identities = 833/1302 (64%), Gaps = 36/1302 (3%) Strand=Plus/Plus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| ||| | ||||| | || | |||| ||||| |||| ||| |||||||| ||| Sbjct 5178327 TAGATGTTGCTGGTGTAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGGGCGGTTGAG 5178386 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 || |||||||| || || | ||| || ||||| | | || | | || |||| Sbjct 5178387 GCGGTGGGCATCGGGGCTAAGAGCAGACTGTTCCTCACGCCGTGCTTGGCGATTTTTTCC 5178446 Query 114062 TTGAGGGCGTCCCAGTC------GTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAAC 114115 || || | |||||| || | || || | |||||| |||| || || Sbjct 5178447 TTTAGCAGCTTCCAGTCCAACAGGTCGGTGGGCGTCTTCTCCC------ACATGTCGTAC 5178500 Query 114116 TGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCC 114175 || ||||| || | | | | || || || || | || |||||||| || | | Sbjct 5178501 TGAAGGATGCCCTTGCTGACCGGGGAGCCTTCGTAGGTTTCGTATGGCCCGAGCTCGGCA 5178560 Query 114176 GCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTC 114235 |||| ||| ||||||||||||||||||||| || || ||||| || || | | ||| Sbjct 5178561 GCCAGCTCGCAGCTCGCCTCGAGGGCTGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTC 5178620 Query 114236 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGA 114295 | || || ||| | || |||| | || | || ||| | || || | | Sbjct 5178621 AGAAGCTGAGCTTCGGGGCTTTCGAACGGGTAACGCATGAGGATGAATGCGTCGGCCAAA 5178680 Query 114296 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACG 114355 || |||||||||| || ||||| | || | | | || ||||| ||| ||| Sbjct 5178681 CCCTGGACACCGATTCCTATTGGCCTGTGGCGCTTGTTGGACTTCTCAGCTTCGGGCACT 5178740 Query 114356 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA 114415 ||||| |||| |||| || | | | || | |||||| || ||||| || | || Sbjct 5178741 GGATAGTAATTAATATCTATGATCTTGTTCAAGTTTTTGACAACTACCTTGGTCACAGCA 5178800 Query 114416 TGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATT 114475 || |||| | |||||| | || ||| | |||| ||| | || |||| Sbjct 5178801 GCTAGTTTTTGAAAGTCAAAAGTCCG---CTCAGCGGTGACGTACATGTTGAGTGCGACG 5178857 Query 114476 GACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACAC 114535 || ||||||||||| || | ||| || | ||||| || | |||||| || || Sbjct 5178858 GAGGCCAGATTACAAACCGCTACCTCGTCGCTGCTGGTGTATTCCACAATTTCTGTGCAT 5178917 Query 114536 AAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCC 114595 | ||| ||||| |||||||||| |||| || || ||| | || || ||||| Sbjct 5178918 AGATTGCTGCTCTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTATTGCAGGCATCT 5178977 Query 114596 TTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACA 114655 ||||| ||||||||||| || || || || || ||||||| | || || | ||| || Sbjct 5178978 TTGTAGAGCATGTATGGAGTGCCGGTTTCAGTCTGGGACTCTATGATGGCATGCCAAACC 5179037 Query 114656 T-CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGC 114714 | | | | || || || ||| | || || || | |||||| || |||||||| Sbjct 5179038 TGCTGGGCCTTCACCACACGC-TTGACGCGGCCTTCTTTCTCGTATTTGGTGTAGAGCTT 5179096 Query 114715 TTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGA 114774 |||||||| || ||| | ||| ||||| || | ||||| || | ||||| Sbjct 5179097 CTCAAACTCCTCCCCCCAGCACTCATTCAGCCCGGGACATTCGTCTGGACACATTAGAGA 5179156 Query 114775 CCA---TTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGA 114831 ||| || || |||| || | ||||||||| | ||| |||||||| | | | | Sbjct 5179157 CCAGTCCTGGTTACTCTCC---ACCCTCTTCATGAACAAGTCAGGGATCCACATACCGTA 5179213 Query 114832 GAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGT 114890 ||| || || | | | ||| || | || || || |||||||| |||| Sbjct 5179214 GAAAAGGTCTCTGGCTCTCTGCTCCTCTTTTCCAGTG-TTCTTCTTCAACTCCAGGAAGT 5179272 Query 114891 CCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC---CTTACGACGAC 114947 | | ||||| | ||||| ||||||||||||| |||| | ||| | | | Sbjct 5179273 CAAATATATCGGAATGCCAGGGTTCCAGGTACATGGCGAAAGCCCCAGGCCTCTTGTTTC 5179332 Query 114948 CAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCAT 115007 || |||||| ||||| | || ||| || | || | ||||| || | | |||| Sbjct 5179333 CACCCTGGTCCACATAGCGTGCGGTGTTGTTGTAAACTCTCAGCATGGGGACAAGCCCAT 5179392 Query 115008 CAGATTGGCCATTTGTCCCCCGAATACGAGACTT--ATTGGCTCTGA--CATCATGGATG 115063 || | |||||| || || || | |||| | | ||||| || | || | Sbjct 5179393 TGGAGTTGCCATTGGTGCCAGCGAT--GTAACTTCCCGTAGATCTGATGCAGC--TGACG 5179448 Query 115064 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 115123 || ||| || || || ||| |||| ||||| ||||||||| | || || | || Sbjct 5179449 GCCACACCGATTCCTCCAGCCGACTTGGAGATGAGCGCGCACTGTTTCAGCGTGTCATAA 5179508 Query 115124 ATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTT 115183 || || ||||| |||| |||| | |||| ||||||||||| |||| |||||||| Sbjct 5179509 ATGCCCTCGATGCTGTCATCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTG 5179568 Query 115184 GGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAAC 115225 ||||| || || ||||| || || | || ||| ||||| Sbjct 5179569 TTGGTACCTGCATTAAAGAGTGTCGGGGAGGCATGGGTGAAC 5179610 >seq15 Length=11516971 Score = 95.1 bits (104), Expect = 1e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| ||| | ||||| | ||| | | |||| ||||| |||| ||| |||||||||||| Sbjct 9311918 TAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTCCCCAGGATCTGGGCGGTGGAG 9311977 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 114033 |||||||||||||| |||| || |||||||| Sbjct 9311978 GCTGTGGGCATGGGAGCCAGCAGCAGGCTGTT 9312009 Score = 86.0 bits (94), Expect = 7e-12 Identities = 113/155 (73%), Gaps = 4/155 (3%) Strand=Plus/Plus Query 114499 CTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATT--TGAACTCTTAATGGTG 114556 |||||| || |||||||||| ||| || || |||| ||| || | | | |||||| Sbjct 9312816 CTCATCTTTGCTCGTGTACTCTACAATCTCTGTGCACAGATTGCTGGATT--TGATGGTG 9312873 Query 114557 CCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTC 114616 |||| ||||| || || ||| |||| || || |||||||| ||||||||||| || Sbjct 9312874 CCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTATGGTGTG 9312933 Query 114617 CCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 114651 || || || ||||| |||| || || || | ||| Sbjct 9312934 CCGGTTTCTGTTTGAGACTCGATGATGGCGTACCA 9312968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597302563601800