Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq11 159 3e-34 seq15 86.0 6e-12 >seq11 Length=11238946 Score = 159 bits (176), Expect = 3e-34 Identities = 968/1535 (63%), Gaps = 31/1535 (2%) Strand=Plus/Minus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| ||| ||| | ||| ||||| |||||| ||| ||||| | ||||| | |||| Sbjct 5179774 TACAATTTCTTCGGCTTTAAAACCCTGGAGCGGTCCTACCTGTTGAAGATCAACGGCAAA 5179715 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCA-CGGCCACGA 93836 || ||||||||||||| || |||| ||| | || | | ||||| || | || || Sbjct 5179714 GTGGCCGAGCGACCGCAGCACATGCTCATGAGGGTTTCTGTGGGGATCCATCAAACA-GA 5179656 Query 93837 CAT-GCCGAATGTTTTGCGGGCTTTCAGAGACATGCGG---GACAAGAGGTATACCATGG 93892 || | | | ||| || || || ||| | || ||| ||| ||| | Sbjct 5179655 TATTGATGCAGCGATTGAAACCTA-CA---ACCTGCTGTCAGAGAAGTGGTTCACCCATG 5179600 Query 93893 CCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGA 93952 || ||||||| || || || || || ||| ||||||| |||| || |||||| Sbjct 5179599 CCTCCCCGACACTCTTTAATGCAGGTACCAACAGGCCACAGCTGTCCAGCTGCTTCCTGC 5179540 Query 93953 TGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012 | | | |||| ||| |||| || |||| |||| || || | || ||| || Sbjct 5179539 TCGCCATGAAGGATGACAGCATCGAGGGCATTTATGACACGCTGAAACAGTGCGCGCTCA 5179480 Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072 |||| || | || || |||||||| | ||| | | | | | | ||| | Sbjct 5179479 TCTCCAAGTCGGCTGGAGGAATCGGTGTGGCCGTCAGCTGCATCAGATCTACGGGAAGTT 5179420 Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132 ||||| || |||||||||| |||||| || || ||||| ||||| | || | ||||| Sbjct 5179419 ACATCGCTGGCACCAATGGCAACTCCAATGGGCTTGTCCCCATGCTGAGAGTTTACAACA 5179360 Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192 || | || ||||| |||||||||||||| | |||| || ||||||| | || | Sbjct 5179359 ACACCGCACGCTATGTGGACCAGGGTGGAAACAAGAGGCCTGGGGCTTTCGCCATGTACC 5179300 Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252 | || |||||||| | || | | ||| | || || |||||| || || | Sbjct 5179299 TGGAACCCTGGCATTCCGATATATTTGACTTCCTGGAGTTGAAGAAGAACACTGGAAAAG 5179240 Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312 | | |||| ||||||||||| ||||||| | | ||| | || ||| | || ||||| Sbjct 5179239 AGGAGCAGAGAGCCAGAGACCTTTTCTACGGTATGTGGATCCCTGACTTGTTCATGAAGA 5179180 Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCG 94372 | || |||| ||| | |||| ||| | ||||| | ||||||||||| ||| | Sbjct 5179179 GGGTGGAGAGTAACCAGGACTGGTCTCTAATGTGTCCAGACGAATGTCCCGGGCTGAATG 5179120 Query 94373 ACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCA 94432 | || || | ||||| | | || | ||||| | ||| | || Sbjct 5179119 AGTGCTGGGGGGAGGAGTTTGAGAAGCTCTACACCAAATACGAGAAAGAAGGCCGCGTCA 5179060 Query 94433 GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGG 94492 | || || | || | || | ||| || ||| | || ||| || || | Sbjct 5179059 AGCGTGTGGTGAAGGCCCAGCAGGTTTGGCATGCCATCATAGAGTCCCAGACTGAAACCG 5179000 Query 94493 GTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCG 94552 | || || ||||| | | ||| || | ||| ||| |||||||||| | || | Sbjct 5178999 GCACTCCATACATGCTCTACAAAGATGCCTGCAATAGGAAGAGCAACCAGCAGAATCTGG 5178940 Query 94553 GGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGA 94612 | ||||||||| ||||| ||||| || ||||| || || || |||||| Sbjct 5178939 GCACCATCAAGAGCAGCAATCTATGCACAGAAATTGTGGAATACACCAGCAGCGACGAGG 5178880 Query 94613 TTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGT 94672 | || || ||||| |||| |||| || || || | ||| | || | | Sbjct 5178879 TAGCGGTTTGTAATCTGGCCTCCGTCGCACTCAACATGTACGTCACCGCTG---AGCGGA 5178823 Query 94673 CTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTGAACC 94732 || || | ||| | || || ||||| | || || | ||| ||| Sbjct 5178822 CTTTTG--ACTTTCAAAAACTAGCTGC-TGTGA----CCAAGGTAG--TTGTCAAAAACT 5178772 Query 94733 TGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGA 94792 |||||| | | || || | || | ||| || || || || || ||||| || ||| | Sbjct 5178771 TGAACAAGATCATAGATATTAATTACTATCCAGTGCCCGAAGCTGAGAAGTCCAACAAGC 5178712 Query 94793 AGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTC 94852 || |||| || || ||||| ||||||||||| || ||||| | | | |||||| Sbjct 5178711 GCCACAGGCCAATAGGAATCGGTGTCCAGGGTTTGGCCGACGCATTCATCCTCATGCGTT 5178652 Query 94853 TGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTATT 94912 || | ||| ||| || | | |||| | || ||||| | ||| || | Sbjct 5178651 ACCCGTTCGAAAGCCCCGAAGCTCAGCTTCTGAACACCCAGATCTTCGAGACCATCTACT 5178592 Query 94913 ACGGGGCCAT-GAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATCG 94971 ||| ||| | || | | | | | | |||| | || ||||||| ||||| | Sbjct 5178591 ACGCAGCCCTCGAGGCGAGCTG-CGAGCTGGC---TGCCGAGCTCGGGCCATACGAAACC 5178536 Query 94972 TTCCGCGGATCGCCCTTGGAACA-GGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCC 95030 | | || || ||| | || |||||| |||||| |||| | |||| || ||| Sbjct 5178535 TACGAAGGCTC-CCCGGTCAGCAAGGGCATCCTTCAGTACGACATGTGGGAGAAGACGCC 5178477 Query 95031 CTCGGGTCTGTACGACTGGGAAGCT-CTACGCGCTGATGTTATCAAACACGGTGTGAAAA 95089 | | | |||| |||| ||||||| ||| | | | ||| ||||| |||| | Sbjct 5178476 CACCGACCTGTTGGACT-GGAAGCTGCTAAAGGAAAAAATCGCCAAGCACGGCGTGAGGA 5178418 Query 95090 ACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACG 95149 || ||||| | ||||| |||||||| ||||| || || |||||||| |||||||||| Sbjct 5178417 ACAGTCTGCTCTTAGCCCCGATGCCCACCGCCTCAACCGCCCAGATCCTGGGCAACAACG 5178358 Query 95150 AGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCC 95209 |||| ||||| ||| |||| |||| | |||| | | |||| || ||||||| |||| Sbjct 5178357 AGTCTATCGAAGCCTACACCAGCAACATCTACACCCGCAGGGTCCTGTCCGGGGAGTTCC 5178298 Query 95210 CCGTCATCAACAAGCACCTCCTACGGGACCTGACG 95244 | ||||| |||||||| ||||||||| Sbjct 5178297 AGATTGTCAACCCTCACCTCCTCAAAGACCTGACG 5178263 >seq15 Length=11516971 Score = 86.0 bits (94), Expect = 6e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 94180 TTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAG 94239 || || || || || ||||| ||||| | || ||| || ||| | || ||| |||| Sbjct 9313399 TTTGCTGTGTACCTGGAGCCGTGGCATTCCGATGTGTTTGCGTTCCTGGAGCTGAAAAAG 9313340 Query 94240 AACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGAC 94299 ||| ||||| || | ||||||||||||| || |||| |||| | ||| | |||||| Sbjct 9313339 AACACTGGCAAAGAGGAGCAGAGGGCCAGAGATCTGTTCTTCGCTTTGTGGATCCCAGAC 9313280 Query 94300 CTTTTTATGAAACGCGTCGA 94319 || ||||||||||| || || Sbjct 9313279 CTCTTTATGAAACGAGTGGA 9313260 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 95072 TCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGC 95131 ||| ||| || || | ||| ||||| |||| ||||||||||| |||||||| || | Sbjct 9312026 TCAGACATGGCGTCAGGAACAGCCTGCTGCTGGCTCCCATGCCCACAGCCTCCACCGCCC 9311967 Query 95132 AGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACA 95182 ||||||| || ||||||||||| |||| ||| |||| |||| | |||| Sbjct 9311966 AGATCCTGGGGAACAACGAGTCCATCGAGGCCTACACCAGCAACATCTACA 9311916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494680932086600