Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq11 159 3e-34
seq15 86.0 6e-12
>seq11
Length=11238946
Score = 159 bits (176), Expect = 3e-34
Identities = 968/1535 (63%), Gaps = 31/1535 (2%)
Strand=Plus/Minus
Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777
||| ||| ||| | ||| ||||| |||||| ||| ||||| | ||||| | ||||
Sbjct 5179774 TACAATTTCTTCGGCTTTAAAACCCTGGAGCGGTCCTACCTGTTGAAGATCAACGGCAAA 5179715
Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCA-CGGCCACGA 93836
|| ||||||||||||| || |||| ||| | || | | ||||| || | || ||
Sbjct 5179714 GTGGCCGAGCGACCGCAGCACATGCTCATGAGGGTTTCTGTGGGGATCCATCAAACA-GA 5179656
Query 93837 CAT-GCCGAATGTTTTGCGGGCTTTCAGAGACATGCGG---GACAAGAGGTATACCATGG 93892
|| | | | ||| || || || ||| | || ||| ||| ||| |
Sbjct 5179655 TATTGATGCAGCGATTGAAACCTA-CA---ACCTGCTGTCAGAGAAGTGGTTCACCCATG 5179600
Query 93893 CCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGA 93952
|| ||||||| || || || || || ||| ||||||| |||| || ||||||
Sbjct 5179599 CCTCCCCGACACTCTTTAATGCAGGTACCAACAGGCCACAGCTGTCCAGCTGCTTCCTGC 5179540
Query 93953 TGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012
| | | |||| ||| |||| || |||| |||| || || | || ||| ||
Sbjct 5179539 TCGCCATGAAGGATGACAGCATCGAGGGCATTTATGACACGCTGAAACAGTGCGCGCTCA 5179480
Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072
|||| || | || || |||||||| | ||| | | | | | | ||| |
Sbjct 5179479 TCTCCAAGTCGGCTGGAGGAATCGGTGTGGCCGTCAGCTGCATCAGATCTACGGGAAGTT 5179420
Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132
||||| || |||||||||| |||||| || || ||||| ||||| | || | |||||
Sbjct 5179419 ACATCGCTGGCACCAATGGCAACTCCAATGGGCTTGTCCCCATGCTGAGAGTTTACAACA 5179360
Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192
|| | || ||||| |||||||||||||| | |||| || ||||||| | || |
Sbjct 5179359 ACACCGCACGCTATGTGGACCAGGGTGGAAACAAGAGGCCTGGGGCTTTCGCCATGTACC 5179300
Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252
| || |||||||| | || | | ||| | || || |||||| || || |
Sbjct 5179299 TGGAACCCTGGCATTCCGATATATTTGACTTCCTGGAGTTGAAGAAGAACACTGGAAAAG 5179240
Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312
| | |||| ||||||||||| ||||||| | | ||| | || ||| | || |||||
Sbjct 5179239 AGGAGCAGAGAGCCAGAGACCTTTTCTACGGTATGTGGATCCCTGACTTGTTCATGAAGA 5179180
Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCG 94372
| || |||| ||| | |||| ||| | ||||| | ||||||||||| ||| |
Sbjct 5179179 GGGTGGAGAGTAACCAGGACTGGTCTCTAATGTGTCCAGACGAATGTCCCGGGCTGAATG 5179120
Query 94373 ACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCA 94432
| || || | ||||| | | || | ||||| | ||| | ||
Sbjct 5179119 AGTGCTGGGGGGAGGAGTTTGAGAAGCTCTACACCAAATACGAGAAAGAAGGCCGCGTCA 5179060
Query 94433 GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGG 94492
| || || | || | || | ||| || ||| | || ||| || || |
Sbjct 5179059 AGCGTGTGGTGAAGGCCCAGCAGGTTTGGCATGCCATCATAGAGTCCCAGACTGAAACCG 5179000
Query 94493 GTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCG 94552
| || || ||||| | | ||| || | ||| ||| |||||||||| | || |
Sbjct 5178999 GCACTCCATACATGCTCTACAAAGATGCCTGCAATAGGAAGAGCAACCAGCAGAATCTGG 5178940
Query 94553 GGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGA 94612
| ||||||||| ||||| ||||| || ||||| || || || ||||||
Sbjct 5178939 GCACCATCAAGAGCAGCAATCTATGCACAGAAATTGTGGAATACACCAGCAGCGACGAGG 5178880
Query 94613 TTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGT 94672
| || || ||||| |||| |||| || || || | ||| | || | |
Sbjct 5178879 TAGCGGTTTGTAATCTGGCCTCCGTCGCACTCAACATGTACGTCACCGCTG---AGCGGA 5178823
Query 94673 CTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTGAACC 94732
|| || | ||| | || || ||||| | || || | ||| |||
Sbjct 5178822 CTTTTG--ACTTTCAAAAACTAGCTGC-TGTGA----CCAAGGTAG--TTGTCAAAAACT 5178772
Query 94733 TGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGA 94792
|||||| | | || || | || | ||| || || || || || ||||| || ||| |
Sbjct 5178771 TGAACAAGATCATAGATATTAATTACTATCCAGTGCCCGAAGCTGAGAAGTCCAACAAGC 5178712
Query 94793 AGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTC 94852
|| |||| || || ||||| ||||||||||| || ||||| | | | ||||||
Sbjct 5178711 GCCACAGGCCAATAGGAATCGGTGTCCAGGGTTTGGCCGACGCATTCATCCTCATGCGTT 5178652
Query 94853 TGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTATT 94912
|| | ||| ||| || | | |||| | || ||||| | ||| || |
Sbjct 5178651 ACCCGTTCGAAAGCCCCGAAGCTCAGCTTCTGAACACCCAGATCTTCGAGACCATCTACT 5178592
Query 94913 ACGGGGCCAT-GAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATCG 94971
||| ||| | || | | | | | | |||| | || ||||||| ||||| |
Sbjct 5178591 ACGCAGCCCTCGAGGCGAGCTG-CGAGCTGGC---TGCCGAGCTCGGGCCATACGAAACC 5178536
Query 94972 TTCCGCGGATCGCCCTTGGAACA-GGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCC 95030
| | || || ||| | || |||||| |||||| |||| | |||| || |||
Sbjct 5178535 TACGAAGGCTC-CCCGGTCAGCAAGGGCATCCTTCAGTACGACATGTGGGAGAAGACGCC 5178477
Query 95031 CTCGGGTCTGTACGACTGGGAAGCT-CTACGCGCTGATGTTATCAAACACGGTGTGAAAA 95089
| | | |||| |||| ||||||| ||| | | | ||| ||||| |||| |
Sbjct 5178476 CACCGACCTGTTGGACT-GGAAGCTGCTAAAGGAAAAAATCGCCAAGCACGGCGTGAGGA 5178418
Query 95090 ACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACG 95149
|| ||||| | ||||| |||||||| ||||| || || |||||||| ||||||||||
Sbjct 5178417 ACAGTCTGCTCTTAGCCCCGATGCCCACCGCCTCAACCGCCCAGATCCTGGGCAACAACG 5178358
Query 95150 AGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCC 95209
|||| ||||| ||| |||| |||| | |||| | | |||| || ||||||| ||||
Sbjct 5178357 AGTCTATCGAAGCCTACACCAGCAACATCTACACCCGCAGGGTCCTGTCCGGGGAGTTCC 5178298
Query 95210 CCGTCATCAACAAGCACCTCCTACGGGACCTGACG 95244
| ||||| |||||||| |||||||||
Sbjct 5178297 AGATTGTCAACCCTCACCTCCTCAAAGACCTGACG 5178263
>seq15
Length=11516971
Score = 86.0 bits (94), Expect = 6e-12
Identities = 103/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 94180 TTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAG 94239
|| || || || || ||||| ||||| | || ||| || ||| | || ||| ||||
Sbjct 9313399 TTTGCTGTGTACCTGGAGCCGTGGCATTCCGATGTGTTTGCGTTCCTGGAGCTGAAAAAG 9313340
Query 94240 AACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGAC 94299
||| ||||| || | ||||||||||||| || |||| |||| | ||| | ||||||
Sbjct 9313339 AACACTGGCAAAGAGGAGCAGAGGGCCAGAGATCTGTTCTTCGCTTTGTGGATCCCAGAC 9313280
Query 94300 CTTTTTATGAAACGCGTCGA 94319
|| ||||||||||| || ||
Sbjct 9313279 CTCTTTATGAAACGAGTGGA 9313260
Score = 84.2 bits (92), Expect = 2e-11
Identities = 85/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 95072 TCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGC 95131
||| ||| || || | ||| ||||| |||| ||||||||||| |||||||| || |
Sbjct 9312026 TCAGACATGGCGTCAGGAACAGCCTGCTGCTGGCTCCCATGCCCACAGCCTCCACCGCCC 9311967
Query 95132 AGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACA 95182
||||||| || ||||||||||| |||| ||| |||| |||| | ||||
Sbjct 9311966 AGATCCTGGGGAACAACGAGTCCATCGAGGCCTACACCAGCAACATCTACA 9311916
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494680932086600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |