Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq11 138 1e-27 seq15 93.3 4e-14 >seq11 Length=11238946 Score = 138 bits (152), Expect = 1e-27 Identities = 790/1256 (63%), Gaps = 50/1256 (4%) Strand=Plus/Plus Query 153303 GCCAGTTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTG 153362 ||||| |||||||| |||||||| || | ||||| ||||| ||| ||| || | || Sbjct 5178561 GCCAGCTCGCAGCTCGCCTCGAGGGCTGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTC 5178620 Query 153363 AGAACGGCCGCTTCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGA 153422 |||| ||||| ||| ||| |||| |||| || | || |||||||||| | Sbjct 5178621 AGAAGCTGAGCTTCGGGGCTTTCGAACGGGTAACGCATGAGGATGAATGCGTCGGCCAAA 5178680 Query 153423 CCCTGGATACCGACGCCGATGGGTCGATGCTTCTCGTTG-----CTGCGCCTCGCGCTCG 153477 ||||||| ||||| || || || | || || |||| || || ||| || | Sbjct 5178681 CCCTGGACACCGATTCCTATTGGCCTGTGGCGCTTGTTGGACTTCTCAGCTTCGGGCACT 5178740 Query 153478 CTATGGGATAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTA 153537 ||||||| ||| ||| || || ||||| | ||| || || || || || | Sbjct 5178741 -----GGATAGTAATTAATATCTATGATCTTGTTCAAGTTTTTGACAACTACCTTGGTCA 5178795 Query 153538 TCGCCTTAAGTTTCTCGAAATCATAGGTCATTTCGTCGACG-CGTACGCATCGATTCACG 153596 || ||||| | || ||| | ||| || || | ||||| | || | Sbjct 5178796 CAGCAGCTAGTTTTTGAAAGTCAAAAGTCCGCTCAGCGGTGACGTACATGTTGAGT---- 5178851 Query 153597 GCAATAGACGCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCG 153656 || | || ||||||||||| || || ||| ||| | | |||| | ||| || || Sbjct 5178852 GCGACGGAGGCCAGATTACAAACCGCTACCTCGTCGCTGCTGGTGTATTCCACAATTTCT 5178911 Query 153657 GCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCAC 153716 | ||| || ||||||| || ||| ||||| ||| ||||| ||||| || | |||||| Sbjct 5178912 GTGCATAGATTGCTGCTCTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTATTGCAG 5178971 Query 153717 GCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGAT------- 153769 || |||||| |||||||||| || |||||| || || | || | ||| Sbjct 5178972 GCATCTTTGTAGAGCATGTATGGAGTGCCGGTTTCAGTCTGGGACTCTATGATGGCATGC 5179031 Query 153770 -AAACCTATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATC 153828 ||||| ||| || ||| | | ||| |||| || |||||| || |||||||| Sbjct 5179032 CAAACC--TGCTGGGCCTTCAC---CACACGCT--TGA-CGCGGCCTTCTTTCTCGTATT 5179083 Query 153829 GCTCGTACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCG 153888 ||| || ||||||||| || || |||| || || |||||||| | | | Sbjct 5179084 TGGTGTAGAGCTTCTCAAACTCCTCCCCCCAGCACTCATTCAGCCCGGGACATTCGTCTG 5179143 Query 153889 GACACATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCC 153948 ||||||| || ||||| | || | || | |||||||| || || | || Sbjct 5179144 GACACATTAGAGACCAGTCCTGGTTACTCTCCACCCTCTTCATGAACAAGTCAGGGATCC 5179203 Query 153949 AGAGCGCGTACATGAGGTCGC--GCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCAG 154006 | | |||| | ||||| | || | ||| ||||| || |||| |||| Sbjct 5179204 ACATACCGTAGAAAAGGTCTCTGGCTCTCTGC--TCCTCTTTTCCAGTGTTCTTCTTCAA 5179261 Query 154007 ATTGAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTT 154066 | || | | | | || |||| ||||||||||| | ||| | ||| | || || Sbjct 5179262 CTCCAGGAAGTCAAATATATCGGAATGCCAGGGTTCCAGGTACATGGCGAAAGCCCCAGG 5179321 Query 154067 ACGC---TTTCCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGG 154123 | | ||||| ||||| || || | ||| | | |||||| | || | || |||||| Sbjct 5179322 CCTCTTGTTTCCACCCTGGTCCACATAGCGTGCGGTGTTGTTGTAAACTCTCAGCATGGG 5179381 Query 154124 TTCCAGGCCGCTTGCGGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTG 154183 | || || | | | |||| ||||| | ||| | || || || | || Sbjct 5179382 GACAAGCCCATTGGAGTTGCCATTGGTGCCAGCGATGTAACTTCC-----CGTAGATCTG 5179436 Query 154184 ATGC-----ACGTTAACGCCAATGCCGCC-GCCGTACTTTGATATGGCAGCGCAGTCGCC 154237 |||| ||| || || || || || |||| |||| || ||| ||||| | Sbjct 5179437 ATGCAGCTGACGGCCACACCGATTCCTCCAGCCG-ACTTGGAGATGAGCGCGCACTGTTT 5179495 Query 154238 CAGCGTCCTGTAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACA 154297 |||||| || ||||| |||||||| || || | | |||||| ||| || | Sbjct 5179496 CAGCGTGTCATAAATGCCCTCGATGCTGTCATCCTTCATGGCGAGCAGGAAGCAGCTGGA 5179555 Query 154298 CATTTGCGGAATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTT 154357 || || || || || || || |||||| || || || || || ||| || Sbjct 5179556 CAGCTGTGGCCTGTTGGTACCTGCATTAAAGAGTGTCGGGGAGGCATGGGTGAACCACTT 5179615 Query 154358 TTGGCTCATCATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAG 154417 | || || | ||| ||||| || || | || ||||| || || || | Sbjct 5179616 CTCTGACAGCAGGTTGTAGGTTTCAATCGCTGCATCAATATCTGTTTGATGGATCCCCAC 5179675 Query 154418 CGCGACGCGCATGAGCATGTGCTGCGGACGTTCGGCGACTCTATTGTCAATCTTCAAGAG 154477 | || | |||||||||||||||||| || ||||| ||| | || |||||||| || Sbjct 5179676 AGAAACCCTCATGAGCATGTGCTGCGGTCGCTCGGCCACTTTGCCGTTGATCTTCAACAG 5179735 Query 154478 ATATCCATTTTCGAGGGTTTTGTAACCGAAATACTTGTATTCAAAATCTAGCTCAT 154533 || || |||||||| | ||||| | |||||| |||||| | |||| Sbjct 5179736 GTAGGACCGCTCCAGGGTTTTAAAGCCGAAGAAATTGTATGAAAAATCACGGTCAT 5179791 >seq15 Length=11516971 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || | || ||||| || | || | | | |||||||| || |||||||||||| Sbjct 2476973 GCCCCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 2477032 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || || || || || || || | | |||| || | ||| || || || || Sbjct 2477033 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGG 2477092 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| || || | | || | ||||||| | | |||||| Sbjct 2477093 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCAC 2477152 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | || | || || |||||||| ||||||||||| ||||||||| Sbjct 2477153 CTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 2477201 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || | || ||||| || | || | | | |||||||| || |||||||||||| Sbjct 2477201 GCCCCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 2477260 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || || || || || || || | | |||| || | ||| || || || || Sbjct 2477261 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGG 2477320 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| || || | | || | ||||||| | | |||||| Sbjct 2477321 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCAC 2477380 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | || | || || |||||||| ||||||||||| ||||||||| Sbjct 2477381 CTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 2477429 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || | || ||||| || | || | | | |||||||| || |||||||||||| Sbjct 2476746 CCACCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 2476805 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || || || || || | | |||| || | ||| || || || || Sbjct 2476806 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 2476865 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| ||| || || | | || | ||||||| | | ||||||| Sbjct 2476866 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACC 2476925 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 || | || | || || |||||||| ||||||||||| ||||||||| Sbjct 2476926 TCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 2476973 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || | || ||||| || | || | | | |||||||| || |||||||||||| Sbjct 2477429 GCCCCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 2477488 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || || || || || || || | | |||| || | ||| || || || || Sbjct 2477489 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGG 2477548 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| || || | | || | |||||| | | |||||| Sbjct 2477549 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCAC 2477608 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | || | || || |||||||| ||||||||||| ||||||||| Sbjct 2477609 CTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 2477657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496220000581200