Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq11 138 1e-27
seq15 93.3 4e-14
>seq11
Length=11238946
Score = 138 bits (152), Expect = 1e-27
Identities = 790/1256 (63%), Gaps = 50/1256 (4%)
Strand=Plus/Plus
Query 153303 GCCAGTTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTG 153362
||||| |||||||| |||||||| || | ||||| ||||| ||| ||| || | ||
Sbjct 5178561 GCCAGCTCGCAGCTCGCCTCGAGGGCTGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTC 5178620
Query 153363 AGAACGGCCGCTTCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGA 153422
|||| ||||| ||| ||| |||| |||| || | || |||||||||| |
Sbjct 5178621 AGAAGCTGAGCTTCGGGGCTTTCGAACGGGTAACGCATGAGGATGAATGCGTCGGCCAAA 5178680
Query 153423 CCCTGGATACCGACGCCGATGGGTCGATGCTTCTCGTTG-----CTGCGCCTCGCGCTCG 153477
||||||| ||||| || || || | || || |||| || || ||| || |
Sbjct 5178681 CCCTGGACACCGATTCCTATTGGCCTGTGGCGCTTGTTGGACTTCTCAGCTTCGGGCACT 5178740
Query 153478 CTATGGGATAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTA 153537
||||||| ||| ||| || || ||||| | ||| || || || || || |
Sbjct 5178741 -----GGATAGTAATTAATATCTATGATCTTGTTCAAGTTTTTGACAACTACCTTGGTCA 5178795
Query 153538 TCGCCTTAAGTTTCTCGAAATCATAGGTCATTTCGTCGACG-CGTACGCATCGATTCACG 153596
|| ||||| | || ||| | ||| || || | ||||| | || |
Sbjct 5178796 CAGCAGCTAGTTTTTGAAAGTCAAAAGTCCGCTCAGCGGTGACGTACATGTTGAGT---- 5178851
Query 153597 GCAATAGACGCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCG 153656
|| | || ||||||||||| || || ||| ||| | | |||| | ||| || ||
Sbjct 5178852 GCGACGGAGGCCAGATTACAAACCGCTACCTCGTCGCTGCTGGTGTATTCCACAATTTCT 5178911
Query 153657 GCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCAC 153716
| ||| || ||||||| || ||| ||||| ||| ||||| ||||| || | ||||||
Sbjct 5178912 GTGCATAGATTGCTGCTCTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTATTGCAG 5178971
Query 153717 GCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGAT------- 153769
|| |||||| |||||||||| || |||||| || || | || | |||
Sbjct 5178972 GCATCTTTGTAGAGCATGTATGGAGTGCCGGTTTCAGTCTGGGACTCTATGATGGCATGC 5179031
Query 153770 -AAACCTATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATC 153828
||||| ||| || ||| | | ||| |||| || |||||| || ||||||||
Sbjct 5179032 CAAACC--TGCTGGGCCTTCAC---CACACGCT--TGA-CGCGGCCTTCTTTCTCGTATT 5179083
Query 153829 GCTCGTACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCG 153888
||| || ||||||||| || || |||| || || |||||||| | | |
Sbjct 5179084 TGGTGTAGAGCTTCTCAAACTCCTCCCCCCAGCACTCATTCAGCCCGGGACATTCGTCTG 5179143
Query 153889 GACACATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCC 153948
||||||| || ||||| | || | || | |||||||| || || | ||
Sbjct 5179144 GACACATTAGAGACCAGTCCTGGTTACTCTCCACCCTCTTCATGAACAAGTCAGGGATCC 5179203
Query 153949 AGAGCGCGTACATGAGGTCGC--GCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCAG 154006
| | |||| | ||||| | || | ||| ||||| || |||| ||||
Sbjct 5179204 ACATACCGTAGAAAAGGTCTCTGGCTCTCTGC--TCCTCTTTTCCAGTGTTCTTCTTCAA 5179261
Query 154007 ATTGAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTT 154066
| || | | | | || |||| ||||||||||| | ||| | ||| | || ||
Sbjct 5179262 CTCCAGGAAGTCAAATATATCGGAATGCCAGGGTTCCAGGTACATGGCGAAAGCCCCAGG 5179321
Query 154067 ACGC---TTTCCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGG 154123
| | ||||| ||||| || || | ||| | | |||||| | || | || ||||||
Sbjct 5179322 CCTCTTGTTTCCACCCTGGTCCACATAGCGTGCGGTGTTGTTGTAAACTCTCAGCATGGG 5179381
Query 154124 TTCCAGGCCGCTTGCGGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTG 154183
| || || | | | |||| ||||| | ||| | || || || | ||
Sbjct 5179382 GACAAGCCCATTGGAGTTGCCATTGGTGCCAGCGATGTAACTTCC-----CGTAGATCTG 5179436
Query 154184 ATGC-----ACGTTAACGCCAATGCCGCC-GCCGTACTTTGATATGGCAGCGCAGTCGCC 154237
|||| ||| || || || || || |||| |||| || ||| ||||| |
Sbjct 5179437 ATGCAGCTGACGGCCACACCGATTCCTCCAGCCG-ACTTGGAGATGAGCGCGCACTGTTT 5179495
Query 154238 CAGCGTCCTGTAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACA 154297
|||||| || ||||| |||||||| || || | | |||||| ||| || |
Sbjct 5179496 CAGCGTGTCATAAATGCCCTCGATGCTGTCATCCTTCATGGCGAGCAGGAAGCAGCTGGA 5179555
Query 154298 CATTTGCGGAATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTT 154357
|| || || || || || || |||||| || || || || || ||| ||
Sbjct 5179556 CAGCTGTGGCCTGTTGGTACCTGCATTAAAGAGTGTCGGGGAGGCATGGGTGAACCACTT 5179615
Query 154358 TTGGCTCATCATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAG 154417
| || || | ||| ||||| || || | || ||||| || || || |
Sbjct 5179616 CTCTGACAGCAGGTTGTAGGTTTCAATCGCTGCATCAATATCTGTTTGATGGATCCCCAC 5179675
Query 154418 CGCGACGCGCATGAGCATGTGCTGCGGACGTTCGGCGACTCTATTGTCAATCTTCAAGAG 154477
| || | |||||||||||||||||| || ||||| ||| | || |||||||| ||
Sbjct 5179676 AGAAACCCTCATGAGCATGTGCTGCGGTCGCTCGGCCACTTTGCCGTTGATCTTCAACAG 5179735
Query 154478 ATATCCATTTTCGAGGGTTTTGTAACCGAAATACTTGTATTCAAAATCTAGCTCAT 154533
|| || |||||||| | ||||| | |||||| |||||| | ||||
Sbjct 5179736 GTAGGACCGCTCCAGGGTTTTAAAGCCGAAGAAATTGTATGAAAAATCACGGTCAT 5179791
>seq15
Length=11516971
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || | || ||||| || | || | | | |||||||| || ||||||||||||
Sbjct 2476973 GCCCCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 2477032
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| || || || || || || || || | | |||| || | ||| || || || ||
Sbjct 2477033 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGG 2477092
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| ||||| ||||| ||| || || | | || | ||||||| | | ||||||
Sbjct 2477093 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCAC 2477152
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
||| | || | || || |||||||| ||||||||||| |||||||||
Sbjct 2477153 CTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 2477201
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || | || ||||| || | || | | | |||||||| || ||||||||||||
Sbjct 2477201 GCCCCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 2477260
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| || || || || || || || || | | |||| || | ||| || || || ||
Sbjct 2477261 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGG 2477320
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| ||||| ||||| ||| || || | | || | ||||||| | | ||||||
Sbjct 2477321 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCAC 2477380
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
||| | || | || || |||||||| ||||||||||| |||||||||
Sbjct 2477381 CTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 2477429
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || | || ||||| || | || | | | |||||||| || ||||||||||||
Sbjct 2476746 CCACCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 2476805
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || || || || || || || | | |||| || | ||| || || || ||
Sbjct 2476806 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 2476865
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| ||||| ||||| ||| || || | | || | ||||||| | | |||||||
Sbjct 2476866 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACC 2476925
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
|| | || | || || |||||||| ||||||||||| |||||||||
Sbjct 2476926 TCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 2476973
Score = 89.7 bits (98), Expect = 5e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || | || ||||| || | || | | | |||||||| || ||||||||||||
Sbjct 2477429 GCCCCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 2477488
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| || || || || || || || || | | |||| || | ||| || || || ||
Sbjct 2477489 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGG 2477548
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| ||||| ||||| ||| || || | | || | |||||| | | ||||||
Sbjct 2477549 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCAC 2477608
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
||| | || | || || |||||||| ||||||||||| |||||||||
Sbjct 2477609 CTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 2477657
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496220000581200
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