Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq11 125 7e-24
seq15 100 3e-16
>seq11
Length=11238946
Score = 125 bits (138), Expect = 7e-24
Identities = 490/756 (65%), Gaps = 26/756 (3%)
Strand=Plus/Plus
Query 146044 AGGGCCTTGATGAGATACTGGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGA 146103
||| | |||| ||| | ||||||| | ||| ||||| |||| || || | |
Sbjct 5178267 AGGTCTTTGAGGAGGTGAGGGTTGACAATCTGGAACTCCCCGGACAGGACCCTGCGGGTG 5178326
Query 146104 TACACGTTGCTGGTGAACGGCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTA 146163
|| | |||||||||| | | |||| ||||||||||| || || ||||| || || |
Sbjct 5178327 TAGATGTTGCTGGTGTAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGGGCGGTTGAG 5178386
Query 146164 GCGGTAGGCATGTACGCCACCAGCAAAGAGTTTCTCACGCCGTGTCTTTGA-ATCTTTTC 146222
||||| ||||| || | |||| | ||| ||||||||||| ||| | || |||||
Sbjct 5178387 GCGGTGGGCATCGGGGCTAAGAGCAGACTGTTCCTCACGCCGTG-CTTGGCGATTTTTTC 5178445
Query 146223 CCGTAGTTTGGACCAATTCCACAAATGATCCGTGGGATAGATATTGTAGTTGTCGTAATG 146282
| ||| ||| | | ||| | || ||||| | | | ||||||| ||
Sbjct 5178446 CTTTAGCAGCTTCCAGTCCAACA---GGTCGGTGGGCGTCTTCTCCCACATGTCGTACTG 5178502
Query 146283 CATAGTGCC---GCGGAACAGGGGGCTATTCTCGTACGATTCATAAGGACCGTCGATCTT 146339
| |||| || || | ||| || | |||| | ||| || || ||| | ||
Sbjct 5178503 AAGGATGCCCTTGCTGACCGGGGAGCCTT---CGTAGGTTTCGTATGGCCCG---AGCTC 5178556
Query 146340 GGC---CAGTTCGCAGCTAGCTTCCAGAGCCGAAAAGTATATGGTCTCCGCGATCATGTA 146396
||| ||| |||||||| || || || || | |||| |||||||| |||| |
Sbjct 5178557 GGCAGCCAGCTCGCAGCTCGCCTCGAGGGCTGCGTAGTAGATGGTCTCGAAGATCTGGGT 5178616
Query 146397 GTTGACGCTCCTG-GCCTCCTCGCTGTCGTAGGGGATATCG-AGAAGCACAAAGGCGTCG 146454
||| | | ||| || || ||| ||| | ||| || || | || | || ||||||
Sbjct 5178617 GTTCA-GAAGCTGAGCTTCGGGGCTTTCGAACGGG-TAACGCATGAGGATGAATGCGTCG 5178674
Query 146455 GCGAGACCCTGTATCCCGACACCAACGGGGCGGTGTTTCTTGTTACTGTTCGCAGCGCCC 146514
|| | |||||| | |||| || | || | ||| |||||| ||| |||| |
Sbjct 5178675 GCCAAACCCTGGACACCGATTCCTATTGGCCTGTGGCGCTTGTTGGACTTCTCAGCTTCG 5178734
Query 146515 G-CAGTGGGATAGTGGTTGCTGTCGATGATCTTGTTGAGATTACGCACGACAATTTTCGT 146573
| || ||| ||||| || | || ||||||||||| | || || || | || ||
Sbjct 5178735 GGCACTGG-ATAGTAATTAATATCTATGATCTTGTTCAAGTTTTTGACAACTACCTTGGT 5178793
Query 146574 CAAACGATTCAGCAGGACATAGTCAAATGTTTTAGTTTTAACGTTGACGCACTTGTTGAC 146633
|| | | || | ||||||| || | | || ||||| || ||||||
Sbjct 5178794 CACAGCAGCTAGTTTTTGAAAGTCAAAAGTCCGC---TCAGCGGTGACGTACATGTTGAG 5178850
Query 146634 GGCGATAGAGGCCAAGTTACATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCTC 146693
|||| ||||||| ||||| || || |||||| || | || | |||||| ||
Sbjct 5178851 TGCGACGGAGGCCAGATTACAAACCGCTACCTCGTCGCTGCTGGTGTATTCCACAATTTC 5178910
Query 146694 GGCGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTACTAAACTTGTTGCA 146753
| ||| || ||||||| ||||||| |||||| ||| | ||||| || | | |||||
Sbjct 5178911 TGTGCATAGATTGCTGCTCTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTATTGCA 5178970
Query 146754 GGGGTCCTTGTAGAGCATGTACGGTCCCCCGGTTTC 146789
|| || |||||||||||||| || ||||||||
Sbjct 5178971 GGCATCTTTGTAGAGCATGTATGGAGTGCCGGTTTC 5179006
>seq15
Length=11516971
Score = 100 bits (110), Expect = 3e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || ||||| ||| | ||||| ||| || ||||| || |||
Sbjct 2476776 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 2476835
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||||| | ||||||||| || || ||||| ||||||||| ||| || |||
Sbjct 2476836 GCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 2476895
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | || | |||||| | ||| || || | || | || ||||| ||||| |||
Sbjct 2476896 ACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTT 2476955
Query 127097 TTTACAAAAATCTGCATG 127114
|||||||| |||||||||
Sbjct 2476956 TTTACAAAGATCTGCATG 2476973
Score = 100 bits (110), Expect = 3e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || ||||| ||| | ||||| ||| || ||||| || |||
Sbjct 2477004 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 2477063
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||||| | ||||||||| || || ||||| ||||||||| ||| || |||
Sbjct 2477064 GCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 2477123
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | || | |||||| | ||| || || | || | || ||||| ||||| |||
Sbjct 2477124 ACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTT 2477183
Query 127097 TTTACAAAAATCTGCATG 127114
|||||||| |||||||||
Sbjct 2477184 TTTACAAAGATCTGCATG 2477201
Score = 100 bits (110), Expect = 3e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || ||||| ||| | ||||| ||| || ||||| || |||
Sbjct 2477232 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 2477291
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||||| | ||||||||| || || ||||| ||||||||| ||| || |||
Sbjct 2477292 GCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 2477351
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | || | |||||| | ||| || || | || | || ||||| ||||| |||
Sbjct 2477352 ACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTT 2477411
Query 127097 TTTACAAAAATCTGCATG 127114
|||||||| |||||||||
Sbjct 2477412 TTTACAAAGATCTGCATG 2477429
Score = 100 bits (110), Expect = 3e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || ||||| ||| | ||||| ||| || ||||| || |||
Sbjct 2477460 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 2477519
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||||| | ||||||||| || || ||||| ||||||||| ||| || |||
Sbjct 2477520 GCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 2477579
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | || | |||||| | ||| || || | || | || ||||| ||||| |||
Sbjct 2477580 ACATTCTCAATGGTGTCACTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTT 2477639
Query 127097 TTTACAAAAATCTGCATG 127114
|||||||| |||||||||
Sbjct 2477640 TTTACAAAGATCTGCATG 2477657
Score = 91.5 bits (100), Expect = 1e-13
Identities = 86/110 (78%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 146680 TACTGCACAATCTCGGCGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTA 146739
|||| |||||||| | ||| || |||||| | |||||| |||||| || | |||||
Sbjct 9312832 TACTCTACAATCTCTGTGCACAGATTGCTGGATTTGATGGTGCCCAGGTTCTGCTGGTTG 9312891
Query 146740 CTAAACTTGTTGCAGGGGTCCTTGTAGAGCATGTACGGTCCCCCGGTTTC 146789
|| | ||||||||| |||||||||||||||||| ||| ||||||||
Sbjct 9312892 CTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTATGGTGTGCCGGTTTC 9312941
Score = 82.4 bits (90), Expect = 7e-11
Identities = 102/140 (73%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 146071 ACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAACGGCTCGAAC 146130
||||||||||| || | |||||| | | | || | |||||||||| | | |||||
Sbjct 9311885 ACCTGAAACTCTCCCGAGAGAACCCTGCGCGTGTAGATGTTGCTGGTGTAGGCCTCGATG 9311944
Query 146131 GACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCCACCAGCAAA 146190
||||||||||| || || ||||| || || | || || |||||| |||| |||||
Sbjct 9311945 GACTCGTTGTTCCCCAGGATCTGGGCGGTGGAGGCTGTGGGCATGGGAGCCAGCAGCAGG 9312004
Query 146191 GAGTTTCTCACGCCGTGTCT 146210
||| || ||||| |||||
Sbjct 9312005 CTGTTCCTGACGCCATGTCT 9312024
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475460174400400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |