Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq11 125 7e-24 seq15 100 3e-16 >seq11 Length=11238946 Score = 125 bits (138), Expect = 7e-24 Identities = 490/756 (65%), Gaps = 26/756 (3%) Strand=Plus/Plus Query 146044 AGGGCCTTGATGAGATACTGGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGA 146103 ||| | |||| ||| | ||||||| | ||| ||||| |||| || || | | Sbjct 5178267 AGGTCTTTGAGGAGGTGAGGGTTGACAATCTGGAACTCCCCGGACAGGACCCTGCGGGTG 5178326 Query 146104 TACACGTTGCTGGTGAACGGCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTA 146163 || | |||||||||| | | |||| ||||||||||| || || ||||| || || | Sbjct 5178327 TAGATGTTGCTGGTGTAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGGGCGGTTGAG 5178386 Query 146164 GCGGTAGGCATGTACGCCACCAGCAAAGAGTTTCTCACGCCGTGTCTTTGA-ATCTTTTC 146222 ||||| ||||| || | |||| | ||| ||||||||||| ||| | || ||||| Sbjct 5178387 GCGGTGGGCATCGGGGCTAAGAGCAGACTGTTCCTCACGCCGTG-CTTGGCGATTTTTTC 5178445 Query 146223 CCGTAGTTTGGACCAATTCCACAAATGATCCGTGGGATAGATATTGTAGTTGTCGTAATG 146282 | ||| ||| | | ||| | || ||||| | | | ||||||| || Sbjct 5178446 CTTTAGCAGCTTCCAGTCCAACA---GGTCGGTGGGCGTCTTCTCCCACATGTCGTACTG 5178502 Query 146283 CATAGTGCC---GCGGAACAGGGGGCTATTCTCGTACGATTCATAAGGACCGTCGATCTT 146339 | |||| || || | ||| || | |||| | ||| || || ||| | || Sbjct 5178503 AAGGATGCCCTTGCTGACCGGGGAGCCTT---CGTAGGTTTCGTATGGCCCG---AGCTC 5178556 Query 146340 GGC---CAGTTCGCAGCTAGCTTCCAGAGCCGAAAAGTATATGGTCTCCGCGATCATGTA 146396 ||| ||| |||||||| || || || || | |||| |||||||| |||| | Sbjct 5178557 GGCAGCCAGCTCGCAGCTCGCCTCGAGGGCTGCGTAGTAGATGGTCTCGAAGATCTGGGT 5178616 Query 146397 GTTGACGCTCCTG-GCCTCCTCGCTGTCGTAGGGGATATCG-AGAAGCACAAAGGCGTCG 146454 ||| | | ||| || || ||| ||| | ||| || || | || | || |||||| Sbjct 5178617 GTTCA-GAAGCTGAGCTTCGGGGCTTTCGAACGGG-TAACGCATGAGGATGAATGCGTCG 5178674 Query 146455 GCGAGACCCTGTATCCCGACACCAACGGGGCGGTGTTTCTTGTTACTGTTCGCAGCGCCC 146514 || | |||||| | |||| || | || | ||| |||||| ||| |||| | Sbjct 5178675 GCCAAACCCTGGACACCGATTCCTATTGGCCTGTGGCGCTTGTTGGACTTCTCAGCTTCG 5178734 Query 146515 G-CAGTGGGATAGTGGTTGCTGTCGATGATCTTGTTGAGATTACGCACGACAATTTTCGT 146573 | || ||| ||||| || | || ||||||||||| | || || || | || || Sbjct 5178735 GGCACTGG-ATAGTAATTAATATCTATGATCTTGTTCAAGTTTTTGACAACTACCTTGGT 5178793 Query 146574 CAAACGATTCAGCAGGACATAGTCAAATGTTTTAGTTTTAACGTTGACGCACTTGTTGAC 146633 || | | || | ||||||| || | | || ||||| || |||||| Sbjct 5178794 CACAGCAGCTAGTTTTTGAAAGTCAAAAGTCCGC---TCAGCGGTGACGTACATGTTGAG 5178850 Query 146634 GGCGATAGAGGCCAAGTTACATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCTC 146693 |||| ||||||| ||||| || || |||||| || | || | |||||| || Sbjct 5178851 TGCGACGGAGGCCAGATTACAAACCGCTACCTCGTCGCTGCTGGTGTATTCCACAATTTC 5178910 Query 146694 GGCGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTACTAAACTTGTTGCA 146753 | ||| || ||||||| ||||||| |||||| ||| | ||||| || | | ||||| Sbjct 5178911 TGTGCATAGATTGCTGCTCTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTATTGCA 5178970 Query 146754 GGGGTCCTTGTAGAGCATGTACGGTCCCCCGGTTTC 146789 || || |||||||||||||| || |||||||| Sbjct 5178971 GGCATCTTTGTAGAGCATGTATGGAGTGCCGGTTTC 5179006 >seq15 Length=11516971 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| | ||||| ||| || ||||| || ||| Sbjct 2476776 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 2476835 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||||| | ||||||||| || || ||||| ||||||||| ||| || ||| Sbjct 2476836 GCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 2476895 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | |||||| | ||| || || | || | || ||||| ||||| ||| Sbjct 2476896 ACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTT 2476955 Query 127097 TTTACAAAAATCTGCATG 127114 |||||||| ||||||||| Sbjct 2476956 TTTACAAAGATCTGCATG 2476973 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| | ||||| ||| || ||||| || ||| Sbjct 2477004 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 2477063 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||||| | ||||||||| || || ||||| ||||||||| ||| || ||| Sbjct 2477064 GCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 2477123 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | |||||| | ||| || || | || | || ||||| ||||| ||| Sbjct 2477124 ACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTT 2477183 Query 127097 TTTACAAAAATCTGCATG 127114 |||||||| ||||||||| Sbjct 2477184 TTTACAAAGATCTGCATG 2477201 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| | ||||| ||| || ||||| || ||| Sbjct 2477232 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 2477291 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||||| | ||||||||| || || ||||| ||||||||| ||| || ||| Sbjct 2477292 GCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 2477351 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | |||||| | ||| || || | || | || ||||| ||||| ||| Sbjct 2477352 ACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTT 2477411 Query 127097 TTTACAAAAATCTGCATG 127114 |||||||| ||||||||| Sbjct 2477412 TTTACAAAGATCTGCATG 2477429 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| | ||||| ||| || ||||| || ||| Sbjct 2477460 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 2477519 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||||| | ||||||||| || || ||||| ||||||||| ||| || ||| Sbjct 2477520 GCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 2477579 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | |||||| | ||| || || | || | || ||||| ||||| ||| Sbjct 2477580 ACATTCTCAATGGTGTCACTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTT 2477639 Query 127097 TTTACAAAAATCTGCATG 127114 |||||||| ||||||||| Sbjct 2477640 TTTACAAAGATCTGCATG 2477657 Score = 91.5 bits (100), Expect = 1e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 146680 TACTGCACAATCTCGGCGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTA 146739 |||| |||||||| | ||| || |||||| | |||||| |||||| || | ||||| Sbjct 9312832 TACTCTACAATCTCTGTGCACAGATTGCTGGATTTGATGGTGCCCAGGTTCTGCTGGTTG 9312891 Query 146740 CTAAACTTGTTGCAGGGGTCCTTGTAGAGCATGTACGGTCCCCCGGTTTC 146789 || | ||||||||| |||||||||||||||||| ||| |||||||| Sbjct 9312892 CTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTATGGTGTGCCGGTTTC 9312941 Score = 82.4 bits (90), Expect = 7e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 146071 ACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAACGGCTCGAAC 146130 ||||||||||| || | |||||| | | | || | |||||||||| | | ||||| Sbjct 9311885 ACCTGAAACTCTCCCGAGAGAACCCTGCGCGTGTAGATGTTGCTGGTGTAGGCCTCGATG 9311944 Query 146131 GACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCCACCAGCAAA 146190 ||||||||||| || || ||||| || || | || || |||||| |||| ||||| Sbjct 9311945 GACTCGTTGTTCCCCAGGATCTGGGCGGTGGAGGCTGTGGGCATGGGAGCCAGCAGCAGG 9312004 Query 146191 GAGTTTCTCACGCCGTGTCT 146210 ||| || ||||| ||||| Sbjct 9312005 CTGTTCCTGACGCCATGTCT 9312024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475460174400400