Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq11 122 8e-23 seq15 95.1 1e-14 >seq11 Length=11238946 Score = 122 bits (134), Expect = 8e-23 Identities = 362/554 (65%), Gaps = 11/554 (2%) Strand=Plus/Minus Query 123606 GAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGC 123665 |||||||| || || ||||||||||||||||| |||||||| ||||| | ||| ||| Sbjct 5179006 GAAACCGGCACTCCATACATGCTCTACAAAGATGCCTGCAATAGGAAGAGCAACCAGCAG 5178947 Query 123666 AACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACAGCGATGCC 123725 || |||| || || || | || ||||| ||| | |||||| | ||||||| | | Sbjct 5178946 AATCTGGGCACCATCAAGAGCAGCAATCTATGCACAGAAATTGTGGAATACACCAGCAGC 5178887 Query 123726 GATCAAGTGGCCGTGTGTAATTTGGCTTCGATTTGCGTGAATCGTTGCGTCGAAAACG-- 123783 || | || || || |||||| |||| || | | || | |||| | || Sbjct 5178886 GACGAGGTAGCGGTTTGTAATCTGGCCTCCGTCGCACTCAACATGTACGTC---ACCGCT 5178830 Query 123784 --GCG--CTTTTAATTTCCAAACGCTCAAACGC-ATAACAAAAACTGTAGTAAAGAATTT 123838 ||| ||||| | || |||| || | || | || || || || || || || Sbjct 5178829 GAGCGGACTTTTGACTTTCAAAAACT-AGCTGCTGTGACCAAGGTAGTTGTCAAAAACTT 5178771 Query 123839 GAACAAAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAA 123898 |||||| || || ||| |||||| ||||| || ||||| ||| || | Sbjct 5178770 GAACAAGATCATAGATATTAATTACTATCCAGTGCCCGAAGCTGAGAAGTCCAACAAGCG 5178711 Query 123899 ACACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCAT 123958 ||||| || | ||| | || | || || ||||||||||| || | | |||| Sbjct 5178710 CCACAGGCCAATAGGAATCGGTGTCCAGGGTTTGGCCGACGCATTCATCCTCATGCGTTA 5178651 Query 123959 GCCGTACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACAATTTATTA 124018 |||| ||||||| |||||| || | || || || || || ||| || || || || Sbjct 5178650 CCCGTTCGAAAGCCCCGAAGCTCAGCTTCTGAACACCCAGATCTTCGAGACCATCTACTA 5178591 Query 124019 CGGCGCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTACGC 124078 || || | |||||||||||||| || || | ||| | ||||||| |||| Sbjct 5178590 CGCAGCCCTCGAGGCGAGCTGCGAGCTGGCTGCCGAGCTCGGGCCATACGAAACCTACGA 5178531 Query 124079 GGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAA 124138 ||| ||||| ||| || || | ||||||||||||||| | || || || | Sbjct 5178530 AGGCTCCCCGGTCAGCAAGGGCATCCTTCAGTACGACATGTGGGAGAAGACGCCCACCGA 5178471 Query 124139 TTTGTGGGACTGGA 124152 ||| |||||||| Sbjct 5178470 CCTGTTGGACTGGA 5178457 >seq15 Length=11516971 Score = 95.1 bits (104), Expect = 1e-14 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 123588 ATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAAC 123647 || ||||| | ||| |||||||| || || |||||||||||||| |||||||||||| Sbjct 9312959 ATCATCGAGTCTCAAACAGAAACCGGCACACCATACATGCTCTACAAGGACGCCTGCAAC 9312900 Query 123648 AGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATT 123707 ||||| | ||| ||| ||| |||| || || |||| || ||||| ||| | || ||| Sbjct 9312899 AGGAAGAGCAACCAGCAGAACCTGGGCACCATCAAATCCAGCAATCTGTGCACAGAGATT 9312840 Query 123708 ATCGAATACA 123717 | || |||| Sbjct 9312839 GTAGAGTACA 9312830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451964581976600