Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq1303 120 4e-22 seq6 93.3 6e-14 >seq1303 Length=194977 Score = 120 bits (132), Expect = 4e-22 Identities = 189/271 (70%), Gaps = 0/271 (0%) Strand=Plus/Plus Query 8905 CACATTGGCACAAATGAGGGACTGAATGGTTGCGGTTTTCACGATGTCTAAACCTACGTC 8964 ||||||| || | ||| ||| | || ||||| || |||||||| || || || | Sbjct 52540 CACATTGTTGCAGACGAGCATCTGCAGCGTGGCGGTGTTGACGATGTCGAAGCCCACTTT 52599 Query 8965 CCCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGGAGCAGATGACGTTCGCCATGAGCCC 9024 || ||||| ||||||||||||||||| |||| ||||||||| ||| |||| | || Sbjct 52600 TCCTCCGAATGTGCTGGGTTTCCAGTATTCCGGAGAGCAGATGGGGTTTCCCATTAAGCC 52659 Query 9025 TTTCAAGGAAAACGGAGCCCCCAGCTCGATGATGCTCTCACCGAAGATGGCACCGGGACG 9084 || | ||| | || ||||||| || | | | |||| || |||||||| | | Sbjct 52660 CTTGAGAGAATAGGGGGCCCCCATTTCCACCAGGGTCTCCCCAAAGATGGCGTTAGTCCT 52719 Query 9085 CGGTTTTTCGACGATGAAGCCAGTGTAGAGTTCGACAGCCTCGACGTCGCCATAGAGGGC 9144 || || || || | | || |||||||| || ||||| ||||||| ||| || | | Sbjct 52720 GGGCTTCTCCACCAGCAGACCTGTGTAGAGCTCCACAGCATCGACGTGGCCGTACATTTC 52779 Query 9145 TTCCAACTCGGCAGCTATCTCCTTCTCACCT 9175 ||| | ||| || || || || ||||| ||| Sbjct 52780 TTCAAGCTCTGCTGCCATTTCTTTCTCTCCT 52810 Score = 87.8 bits (96), Expect = 3e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 10380 GGAGCTATCACCTTTCACCCCGAGAGGAGTAGGGCAGTCACGAGGAACCGGAGGCAGAGT 10439 |||| | |||||| || || | ||| || |||||||| | || || || || || Sbjct 54956 GGAGTTCTCACCTGCTACTCCCATAGGCGTCGGGCAGTCTTTTGACACAGGTGGGAGGGT 55015 Query 10440 TCTCGTATAATAGGATAGATTCGAAAATGCTTCCCAGCTATTGTAGCCATAATCTAAGTT 10499 | ||| |||||||| || || ||| | || |||||||| |||||| ||||||| ||| Sbjct 55016 GCGCGTGTAATAGGAAAGGTTGGAATAAGCCTCCCAGCTTTTGTAGTCATAATCAGCGTT 55075 Query 10500 GTAGAGCGGGGGACTGTCAATCA 10522 | | ||||||||||||||||| Sbjct 55076 GAAAGTCGGGGGACTGTCAATCA 55098 >seq6 Length=9412079 Score = 93.3 bits (102), Expect = 6e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 9715 TCCCCGGTAATGATTAGACGAGTGGTTTGAAACAACTGCTCGTCACCCCATTCCGGGTGT 9774 || ||| | ||||| ||||| | || || || | ||||||||| |||| |||||| Sbjct 4125510 TCACCGATGATGATGAGACGGGATGTCTGGAAGAGCTGCTCGTCGTCCCAGGTGGGGTGT 4125451 Query 9775 TCGTGTTTGAGAACATCGCAGACCCTGTTGTGTTCTCTCAGCCATATGGTGGCGTACATC 9834 ||| || || | |||||||||| |||||| || || ||||| | ||||||||||| | Sbjct 4125450 TCGGCCTTCAGGATGTCGCAGACCCGGTTGTGCTCCCTGAGCCACAGGGTGGCGTACAGC 4125391 Query 9835 ATTAAACCCGGCACTAAACCAAACACTTCATTCCCCACTGCAAA 9878 | ||||| || | | ||||||| ||| | ||| | ||||| Sbjct 4125390 GTCAAACCTGGGATGATTCCAAACATTTCCTGCCCGATGGCAAA 4125347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723666166489000