Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_012783.2
Length=226205
Score E
Sequences producing significant alignments: (Bits) Value
seq1303 120 4e-22
seq6 93.3 6e-14
>seq1303
Length=194977
Score = 120 bits (132), Expect = 4e-22
Identities = 189/271 (70%), Gaps = 0/271 (0%)
Strand=Plus/Plus
Query 8905 CACATTGGCACAAATGAGGGACTGAATGGTTGCGGTTTTCACGATGTCTAAACCTACGTC 8964
||||||| || | ||| ||| | || ||||| || |||||||| || || || |
Sbjct 52540 CACATTGTTGCAGACGAGCATCTGCAGCGTGGCGGTGTTGACGATGTCGAAGCCCACTTT 52599
Query 8965 CCCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGGAGCAGATGACGTTCGCCATGAGCCC 9024
|| ||||| ||||||||||||||||| |||| ||||||||| ||| |||| | ||
Sbjct 52600 TCCTCCGAATGTGCTGGGTTTCCAGTATTCCGGAGAGCAGATGGGGTTTCCCATTAAGCC 52659
Query 9025 TTTCAAGGAAAACGGAGCCCCCAGCTCGATGATGCTCTCACCGAAGATGGCACCGGGACG 9084
|| | ||| | || ||||||| || | | | |||| || |||||||| | |
Sbjct 52660 CTTGAGAGAATAGGGGGCCCCCATTTCCACCAGGGTCTCCCCAAAGATGGCGTTAGTCCT 52719
Query 9085 CGGTTTTTCGACGATGAAGCCAGTGTAGAGTTCGACAGCCTCGACGTCGCCATAGAGGGC 9144
|| || || || | | || |||||||| || ||||| ||||||| ||| || | |
Sbjct 52720 GGGCTTCTCCACCAGCAGACCTGTGTAGAGCTCCACAGCATCGACGTGGCCGTACATTTC 52779
Query 9145 TTCCAACTCGGCAGCTATCTCCTTCTCACCT 9175
||| | ||| || || || || ||||| |||
Sbjct 52780 TTCAAGCTCTGCTGCCATTTCTTTCTCTCCT 52810
Score = 87.8 bits (96), Expect = 3e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 10380 GGAGCTATCACCTTTCACCCCGAGAGGAGTAGGGCAGTCACGAGGAACCGGAGGCAGAGT 10439
|||| | |||||| || || | ||| || |||||||| | || || || || ||
Sbjct 54956 GGAGTTCTCACCTGCTACTCCCATAGGCGTCGGGCAGTCTTTTGACACAGGTGGGAGGGT 55015
Query 10440 TCTCGTATAATAGGATAGATTCGAAAATGCTTCCCAGCTATTGTAGCCATAATCTAAGTT 10499
| ||| |||||||| || || ||| | || |||||||| |||||| ||||||| |||
Sbjct 55016 GCGCGTGTAATAGGAAAGGTTGGAATAAGCCTCCCAGCTTTTGTAGTCATAATCAGCGTT 55075
Query 10500 GTAGAGCGGGGGACTGTCAATCA 10522
| | |||||||||||||||||
Sbjct 55076 GAAAGTCGGGGGACTGTCAATCA 55098
>seq6
Length=9412079
Score = 93.3 bits (102), Expect = 6e-14
Identities = 119/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 9715 TCCCCGGTAATGATTAGACGAGTGGTTTGAAACAACTGCTCGTCACCCCATTCCGGGTGT 9774
|| ||| | ||||| ||||| | || || || | ||||||||| |||| ||||||
Sbjct 4125510 TCACCGATGATGATGAGACGGGATGTCTGGAAGAGCTGCTCGTCGTCCCAGGTGGGGTGT 4125451
Query 9775 TCGTGTTTGAGAACATCGCAGACCCTGTTGTGTTCTCTCAGCCATATGGTGGCGTACATC 9834
||| || || | |||||||||| |||||| || || ||||| | ||||||||||| |
Sbjct 4125450 TCGGCCTTCAGGATGTCGCAGACCCGGTTGTGCTCCCTGAGCCACAGGGTGGCGTACAGC 4125391
Query 9835 ATTAAACCCGGCACTAAACCAAACACTTCATTCCCCACTGCAAA 9878
| ||||| || | | ||||||| ||| | ||| | |||||
Sbjct 4125390 GTCAAACCTGGGATGATTCCAAACATTTCCTGCCCGATGGCAAA 4125347
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 723666166489000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |