Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq11 212 8e-50
seq15 95.1 1e-14
seq1226 84.2 3e-11
>seq11
Length=11238946
Score = 212 bits (234), Expect = 8e-50
Identities = 837/1302 (64%), Gaps = 36/1302 (3%)
Strand=Plus/Plus
Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962
||||||||| | ||||| | || | |||| ||||| |||| ||| ||||| || |||
Sbjct 5178327 TAGATGTTGCTGGTGTAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGGGCGGTTGAG 5178386
Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022
|| |||||||| || || | ||| || ||||| | | || | || ||||
Sbjct 5178387 GCGGTGGGCATCGGGGCTAAGAGCAGACTGTTCCTCACGCCGTGCTTGGCGATTTTTTCC 5178446
Query 116023 TTGAGGGCGTCCCAGTC------GTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAAC 116076
|| || | |||||| || | || || |||| | |||||||| || ||
Sbjct 5178447 TTTAGCAGCTTCCAGTCCAACAGGTCGGTGGGC---GTCTTC---TCCCACATGTCGTAC 5178500
Query 116077 TGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC 116136
|| ||||| || | | | || || || || | || || ||||| || | |
Sbjct 5178501 TGAAGGATGCCCTTGCTGACCGGGGAGCCTTCGTAGGTTTCGTATGGCCCGAGCTCGGCA 5178560
Query 116137 GCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTC 116196
|||| ||| ||||||||||||||||||||| || || ||||| || || | | |||
Sbjct 5178561 GCCAGCTCGCAGCTCGCCTCGAGGGCTGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTC 5178620
Query 116197 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGA 116256
| || || ||| | || |||| | ||| | || ||| | || || | |
Sbjct 5178621 AGAAGCTGAGCTTCGGGGCTTTCGAACGGGTAACGCATGAGGATGAATGCGTCGGCCAAA 5178680
Query 116257 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACG 116316
|| |||||||||| || ||||| | || | | | || ||||| ||| |||
Sbjct 5178681 CCCTGGACACCGATTCCTATTGGCCTGTGGCGCTTGTTGGACTTCTCAGCTTCGGGCACT 5178740
Query 116317 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA 116376
||||| |||| |||| || | | | || | |||||| || ||||| || | ||
Sbjct 5178741 GGATAGTAATTAATATCTATGATCTTGTTCAAGTTTTTGACAACTACCTTGGTCACAGCA 5178800
Query 116377 TGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATT 116436
|| |||| | |||||| | || ||| | |||| ||| | || ||||
Sbjct 5178801 GCTAGTTTTTGAAAGTCAAAAGTCCG---CTCAGCGGTGACGTACATGTTGAGTGCGACG 5178857
Query 116437 GACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACAC 116496
|| ||||||||||| || | ||| || | ||||| || | |||||| || ||
Sbjct 5178858 GAGGCCAGATTACAAACCGCTACCTCGTCGCTGCTGGTGTATTCCACAATTTCTGTGCAT 5178917
Query 116497 AAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCC 116556
| ||| ||||| |||||||||| |||| || || ||| | || || |||||
Sbjct 5178918 AGATTGCTGCTCTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTATTGCAGGCATCT 5178977
Query 116557 TTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACA 116616
||||||||||| ||||| || || || || || ||||||| | || || | ||| ||
Sbjct 5178978 TTGTAGAGCATGTATGGAGTGCCGGTTTCAGTCTGGGACTCTATGATGGCATGCCAAACC 5179037
Query 116617 T-CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGC 116675
| | | | || || || ||| | || || || | |||||| || ||||||||
Sbjct 5179038 TGCTGGGCCTTCACCACACGC-TTGACGCGGCCTTCTTTCTCGTATTTGGTGTAGAGCTT 5179096
Query 116676 CTCAAACTCTTCACCCACAGC-CTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAG 116734
||||||||| || ||| |||| ||| ||||| || | |||||||| | ||||
Sbjct 5179097 CTCAAACTCCTC-CCCCCAGCACTCATTCAGCCCGGGACATTCGTCTGGACACATTAGAG 5179155
Query 116735 ACCA---TTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG 116791
|||| || || |||| |||| ||||||||| | ||| |||||||| | |
Sbjct 5179156 ACCAGTCCTGGTTACTCTCC---ACCCTCTTCATGAACAAGTCAGGGATCCACATACCGT 5179212
Query 116792 AGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAG 116850
|||| || || | | | ||| || | || || || |||||||| |||
Sbjct 5179213 AGAAAAGGTCTCTGGCTCTCTGCTCCTCTTTTCCAGTG-TTCTTCTTCAACTCCAGGAAG 5179271
Query 116851 TCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGAC----G 116906
|| | ||||| | ||||| ||||||||||||| |||| | |||| || |
Sbjct 5179272 TCAAATATATCGGAATGCCAGGGTTCCAGGTACATGGCGAAAG-CCCCAGGCCTCTTGTT 5179330
Query 116907 ACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACC 116966
||| |||||| ||||| | || || ||| | || | ||||| || | | ||
Sbjct 5179331 TCCACCCTGGTCCACATAGCGTGCGGTGTTGTTGTAAACTCTCAGCATGGGGACAAGCCC 5179390
Query 116967 ATCAGATTGGCCATTTGTCCCCCGAATACGAGACTT--GTTGGCTCTGACATCGTGGATG 117024
|| || | |||||| || || || | |||| | | ||||| | || |
Sbjct 5179391 ATTGGAGTTGCCATTGGTGCCAGCGAT--GTAACTTCCCGTAGATCTGATGCAGCTGACG 5179448
Query 117025 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAG 117084
|| ||| || || || ||| |||| ||||| | ||||||| | || || | ||
Sbjct 5179449 GCCACACCGATTCCTCCAGCCGACTTGGAGATGAGCGCGCACTGTTTCAGCGTGTCATAA 5179508
Query 117085 ATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTT 117144
|| || ||||| |||| |||| | |||| ||||||||||| |||| ||||||||
Sbjct 5179509 ATGCCCTCGATGCTGTCATCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTG 5179568
Query 117145 GGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAAC 117186
||||| || || ||||| || || | || ||| |||||
Sbjct 5179569 TTGGTACCTGCATTAAAGAGTGTCGGGGAGGCATGGGTGAAC 5179610
>seq15
Length=11516971
Score = 95.1 bits (104), Expect = 1e-14
Identities = 76/92 (83%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962
||||||||| | ||||| | ||| | | |||| ||||| |||| ||| ||||| ||||||
Sbjct 9311918 TAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTCCCCAGGATCTGGGCGGTGGAG 9311977
Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 115994
|||||||||||||| |||| || ||||||||
Sbjct 9311978 GCTGTGGGCATGGGAGCCAGCAGCAGGCTGTT 9312009
Score = 86.0 bits (94), Expect = 8e-12
Identities = 113/155 (73%), Gaps = 4/155 (3%)
Strand=Plus/Plus
Query 116460 CTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATT--TGAACTCTTAATGGTG 116517
|||||| || |||||||||| ||| || || |||| ||| || | | | ||||||
Sbjct 9312816 CTCATCTTTGCTCGTGTACTCTACAATCTCTGTGCACAGATTGCTGGATT--TGATGGTG 9312873
Query 116518 CCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTC 116577
|||| ||||| || || ||| |||| || || |||||||||||||| ||||| ||
Sbjct 9312874 CCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTATGGTGTG 9312933
Query 116578 CCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 116612
|| || || ||||| |||| || || || | |||
Sbjct 9312934 CCGGTTTCTGTTTGAGACTCGATGATGGCGTACCA 9312968
>seq1226
Length=411779
Score = 84.2 bits (92), Expect = 3e-11
Identities = 84/109 (77%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 127539 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 127598
||||||| | | |||||| || || |||||| ||| || ||||| || |||| ||||
Sbjct 204644 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCCCTTTTCT 204585
Query 127599 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 127647
||| |||||| || | | ||| || ||||||||||| || ||||||||
Sbjct 204584 TCAGCCAGAAGATGGAAGCAAAGGACCCAGAGAAGAAAATACCCTCCAC 204536
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613454783478600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |