Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq11 152 8e-32 seq15 93.3 7e-14 >seq11 Length=11238946 Score = 152 bits (168), Expect = 8e-32 Identities = 366/546 (67%), Gaps = 6/546 (1%) Strand=Plus/Plus Query 205060 CTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTA-CACGTCCATCAGCCCTGGAC 205118 ||||||||| ||||| ||| | |||| || || | ||| || ||||||| |||| Sbjct 5179076 CTCGTATTTGGTGTAGAGCTTCTCAAACTCCTCCCCCCAGCAC-TCATTCAGCCCGGGAC 5179134 Query 205119 ATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTCACCCTCTCCATAAACAGGT 205178 ||| | |||||||| |||||||| ||| | | |||||||| ||| |||| || Sbjct 5179135 ATTCGTCTGGACACATTAGAGACCAGTCCTGGTTACTCTCCACCCTCTTCATGAACAAGT 5179194 Query 205179 CGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCT 205238 | |||||||| ||||| || || || | ||| || | || | |||| ||||| Sbjct 5179195 CAGGGATCCACATACCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCTTTTCCAGTGTTCT 5179254 Query 205239 TTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATT 205297 | ||||| ||||| ||| | | || |||| ||||| || || | ||| ||| | Sbjct 5179255 TCTTCAACTCCAGG-AAGTCAAATATATCGGAATGCCAGGGTTCCAGGTACATGGCGAAA 5179313 Query 205298 GCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGC 205357 || || ||||||||||| |||||||||||||| ||| | | |||| |||||| | Sbjct 5179314 GCCCCAGGCCTCTTGTTTCCACCCTGGTCCACATAGCGTGCGGTGTTGTTGTAAACTCTC 5179373 Query 205358 AGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTCAGCC 205417 ||||| || || || || |||| | | || || |||| |||| || || Sbjct 5179374 AGCATGGGGACAAGCCCATTGGAGTTGCCATTGGTGCCAGCGATGTAACTTCCCGTAGAT 5179433 Query 205418 CTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGCACTCT 205477 || | | | || |||| | || || || |||| |||||| ||| | ||||||| | Sbjct 5179434 CTGATGCAGCTGACGGCCACACCGATTCCTCCAGCCGACTTGGAGATGAGCGCGCACTGT 5179493 Query 205478 TGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCACCAGATAGCACGAA 205537 | ||| ||| || ||||| ||||| || ||| || | | ||| |||| Sbjct 5179494 TTCAGCGTGTCATAAATGCCCTCGATGCTGTCATCCTTCATGGCGAGCAGGAAGCAGCTG 5179553 Query 205538 GCCAGCT-TGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCTGGCGTGGCTGAAGCG 205596 | ||||| |||| |||||| || || | ||||| || ||| ||| ||| |||| | Sbjct 5179554 GACAGCTGTGGC-CTGTTGGTACCTGCATTAAAGAGTGTCGGGGAGGCATGGGTGAACCA 5179612 Query 205597 CTTCTC 205602 |||||| Sbjct 5179613 CTTCTC 5179618 Score = 122 bits (134), Expect = 1e-22 Identities = 228/335 (68%), Gaps = 0/335 (0%) Strand=Plus/Plus Query 204179 AGGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTG 204238 ||||| ||||||| ||||| || || |||||||| |||| |||||| | | |||| || Sbjct 5178279 AGGTGAGGGTTGACAATCTGGAACTCCCCGGACAGGACCCTGCGGGTGTAGATGTTGCTG 5178338 Query 204239 GTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATG 204298 ||| | | ||||| | |||||||||||| | ||||| ||||| ||| |||||||| Sbjct 5178339 GTGTAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGGGCGGTTGAGGCGGTGGGCATC 5178398 Query 204299 GGAGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTC 204358 || || | |||||| ||| | ||| |||| || || | ||| || || Sbjct 5178399 GGGGCTAAGAGCAGACTGTTCCTCACGCCGTGCTTGGCGATTTTTTCCTTTAGCAGCTTC 5178458 Query 204359 CAGTCGTGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTG 204418 ||||| || | |||| || ||||||||||| |||||| |||||| | ||| Sbjct 5178459 CAGTCCAACAGGTCGGTGGGCGTCTTCTCCCACATGTCGTACTGAAGGATGCCCTTGCTG 5178518 Query 204419 ACTGGGCTGCCCTTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCG 204478 || ||| ||| | ||| || || ||| ||| | ||||||| ||| || Sbjct 5178519 ACCGGGGAGCCTTCGTAGGTTTCGTATGGCCCGAGCTCGGCAGCCAGCTCGCAGCTCGCC 5178578 Query 204479 GCCATGGCGTGATAGTACATGGTCTCAAAGATCTG 204513 | | ||| ||||| |||||||| |||||||| Sbjct 5178579 TCGAGGGCTGCGTAGTAGATGGTCTCGAAGATCTG 5178613 Score = 120 bits (132), Expect = 5e-22 Identities = 115/145 (79%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 203917 CCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGTGAATGTT 203976 ||| ||||| | ||||||| | ||||||| |||||| || || ||||| ||||| Sbjct 5177938 CCAGCCGTAGAAGTGCATGCTGGTTAGTTTGCCATAGTTGGGCTCTGCGATGTGGATGTT 5177997 Query 203977 CAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATAATGGTCT 204035 |||||||||||| ||||||||| |||||||| || || || ||||| ||||| ||||| | Sbjct 5177998 CAGAGACTGGCTCTGGTCGATG-AAGGCGCCGCGGTCGGCTGCCATCTTGATGATGGTTT 5178056 Query 204036 TCTGCGAAATCTCCCACACCGTCTT 204060 |||| || || |||||||| || || Sbjct 5178057 TCTGGGAGATTTCCCACACAGTTTT 5178081 >seq15 Length=11516971 Score = 93.3 bits (102), Expect = 7e-14 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 204193 GATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAA 204252 || |||||| ||||| || || |||| || ||| | | |||| ||||| | | |||| Sbjct 9311884 GACCTGAAACTCTCCCGAGAGAACCCTGCGCGTGTAGATGTTGCTGGTGTAGGCCTCGAT 9311943 Query 204253 CGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAG 204312 | ||||||||| || | ||||| |||||| ||| ||||||||||||||||| ||||| Sbjct 9311944 GGACTCGTTGTTCCCCAGGATCTGGGCGGTGGAGGCTGTGGGCATGGGAGCCAGCAGCAG 9312003 Query 204313 G 204313 | Sbjct 9312004 G 9312004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795087263927600