Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq11 152 8e-32
seq15 93.3 7e-14
>seq11
Length=11238946
Score = 152 bits (168), Expect = 8e-32
Identities = 366/546 (67%), Gaps = 6/546 (1%)
Strand=Plus/Plus
Query 205060 CTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTA-CACGTCCATCAGCCCTGGAC 205118
||||||||| ||||| ||| | |||| || || | ||| || ||||||| ||||
Sbjct 5179076 CTCGTATTTGGTGTAGAGCTTCTCAAACTCCTCCCCCCAGCAC-TCATTCAGCCCGGGAC 5179134
Query 205119 ATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTCACCCTCTCCATAAACAGGT 205178
||| | |||||||| |||||||| ||| | | |||||||| ||| |||| ||
Sbjct 5179135 ATTCGTCTGGACACATTAGAGACCAGTCCTGGTTACTCTCCACCCTCTTCATGAACAAGT 5179194
Query 205179 CGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCT 205238
| |||||||| ||||| || || || | ||| || | || | |||| |||||
Sbjct 5179195 CAGGGATCCACATACCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCTTTTCCAGTGTTCT 5179254
Query 205239 TTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATT 205297
| ||||| ||||| ||| | | || |||| ||||| || || | ||| ||| |
Sbjct 5179255 TCTTCAACTCCAGG-AAGTCAAATATATCGGAATGCCAGGGTTCCAGGTACATGGCGAAA 5179313
Query 205298 GCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGC 205357
|| || ||||||||||| |||||||||||||| ||| | | |||| |||||| |
Sbjct 5179314 GCCCCAGGCCTCTTGTTTCCACCCTGGTCCACATAGCGTGCGGTGTTGTTGTAAACTCTC 5179373
Query 205358 AGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTCAGCC 205417
||||| || || || || |||| | | || || |||| |||| || ||
Sbjct 5179374 AGCATGGGGACAAGCCCATTGGAGTTGCCATTGGTGCCAGCGATGTAACTTCCCGTAGAT 5179433
Query 205418 CTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGCACTCT 205477
|| | | | || |||| | || || || |||| |||||| ||| | ||||||| |
Sbjct 5179434 CTGATGCAGCTGACGGCCACACCGATTCCTCCAGCCGACTTGGAGATGAGCGCGCACTGT 5179493
Query 205478 TGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCACCAGATAGCACGAA 205537
| ||| ||| || ||||| ||||| || ||| || | | ||| ||||
Sbjct 5179494 TTCAGCGTGTCATAAATGCCCTCGATGCTGTCATCCTTCATGGCGAGCAGGAAGCAGCTG 5179553
Query 205538 GCCAGCT-TGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCTGGCGTGGCTGAAGCG 205596
| ||||| |||| |||||| || || | ||||| || ||| ||| ||| |||| |
Sbjct 5179554 GACAGCTGTGGC-CTGTTGGTACCTGCATTAAAGAGTGTCGGGGAGGCATGGGTGAACCA 5179612
Query 205597 CTTCTC 205602
||||||
Sbjct 5179613 CTTCTC 5179618
Score = 122 bits (134), Expect = 1e-22
Identities = 228/335 (68%), Gaps = 0/335 (0%)
Strand=Plus/Plus
Query 204179 AGGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTG 204238
||||| ||||||| ||||| || || |||||||| |||| |||||| | | |||| ||
Sbjct 5178279 AGGTGAGGGTTGACAATCTGGAACTCCCCGGACAGGACCCTGCGGGTGTAGATGTTGCTG 5178338
Query 204239 GTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATG 204298
||| | | ||||| | |||||||||||| | ||||| ||||| ||| ||||||||
Sbjct 5178339 GTGTAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGGGCGGTTGAGGCGGTGGGCATC 5178398
Query 204299 GGAGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTC 204358
|| || | |||||| ||| | ||| |||| || || | ||| || ||
Sbjct 5178399 GGGGCTAAGAGCAGACTGTTCCTCACGCCGTGCTTGGCGATTTTTTCCTTTAGCAGCTTC 5178458
Query 204359 CAGTCGTGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTG 204418
||||| || | |||| || ||||||||||| |||||| |||||| | |||
Sbjct 5178459 CAGTCCAACAGGTCGGTGGGCGTCTTCTCCCACATGTCGTACTGAAGGATGCCCTTGCTG 5178518
Query 204419 ACTGGGCTGCCCTTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCG 204478
|| ||| ||| | ||| || || ||| ||| | ||||||| ||| ||
Sbjct 5178519 ACCGGGGAGCCTTCGTAGGTTTCGTATGGCCCGAGCTCGGCAGCCAGCTCGCAGCTCGCC 5178578
Query 204479 GCCATGGCGTGATAGTACATGGTCTCAAAGATCTG 204513
| | ||| ||||| |||||||| ||||||||
Sbjct 5178579 TCGAGGGCTGCGTAGTAGATGGTCTCGAAGATCTG 5178613
Score = 120 bits (132), Expect = 5e-22
Identities = 115/145 (79%), Gaps = 2/145 (1%)
Strand=Plus/Plus
Query 203917 CCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGTGAATGTT 203976
||| ||||| | ||||||| | ||||||| |||||| || || ||||| |||||
Sbjct 5177938 CCAGCCGTAGAAGTGCATGCTGGTTAGTTTGCCATAGTTGGGCTCTGCGATGTGGATGTT 5177997
Query 203977 CAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATAATGGTCT 204035
|||||||||||| ||||||||| |||||||| || || || ||||| ||||| ||||| |
Sbjct 5177998 CAGAGACTGGCTCTGGTCGATG-AAGGCGCCGCGGTCGGCTGCCATCTTGATGATGGTTT 5178056
Query 204036 TCTGCGAAATCTCCCACACCGTCTT 204060
|||| || || |||||||| || ||
Sbjct 5178057 TCTGGGAGATTTCCCACACAGTTTT 5178081
>seq15
Length=11516971
Score = 93.3 bits (102), Expect = 7e-14
Identities = 93/121 (77%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 204193 GATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAA 204252
|| |||||| ||||| || || |||| || ||| | | |||| ||||| | | ||||
Sbjct 9311884 GACCTGAAACTCTCCCGAGAGAACCCTGCGCGTGTAGATGTTGCTGGTGTAGGCCTCGAT 9311943
Query 204253 CGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAG 204312
| ||||||||| || | ||||| |||||| ||| ||||||||||||||||| |||||
Sbjct 9311944 GGACTCGTTGTTCCCCAGGATCTGGGCGGTGGAGGCTGTGGGCATGGGAGCCAGCAGCAG 9312003
Query 204313 G 204313
|
Sbjct 9312004 G 9312004
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795087263927600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |