Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq15 131 4e-25
seq6 91.5 3e-13
>seq15
Length=11516971
Score = 131 bits (144), Expect = 4e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||||||||||||||| || |||||||| |||| ||||||||| | | || | |||||
Sbjct 2476760 CAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 2476819
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || || ||||| || | |||||| || || ||| ||||| ||
Sbjct 2476820 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTC 2476879
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| ||||||| || | |||||| | | || || || | ||||| ||
Sbjct 2476880 CTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGT 2476939
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || || ||||| ||||| || ||
Sbjct 2476940 CTTGCCAGTCAGGGTTTTTACAAAGATCTG 2476969
Score = 131 bits (144), Expect = 4e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||||||||||||||| || |||||||| |||| ||||||||| | | || | |||||
Sbjct 2476988 CAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 2477047
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || || ||||| || | |||||| || || ||| ||||| ||
Sbjct 2477048 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTC 2477107
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| ||||||| || | |||||| | | || || || | ||||| ||
Sbjct 2477108 CTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGT 2477167
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || || ||||| ||||| || ||
Sbjct 2477168 CTTGCCAGTCAGGGTTTTTACAAAGATCTG 2477197
Score = 131 bits (144), Expect = 4e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||||||||||||||| || |||||||| |||| ||||||||| | | || | |||||
Sbjct 2477216 CAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 2477275
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || || ||||| || | |||||| || || ||| ||||| ||
Sbjct 2477276 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTC 2477335
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| ||||||| || | |||||| | | || || || | ||||| ||
Sbjct 2477336 CTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGT 2477395
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || || ||||| ||||| || ||
Sbjct 2477396 CTTGCCAGTCAGGGTTTTTACAAAGATCTG 2477425
Score = 127 bits (140), Expect = 5e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||||||||||||||| || |||||||| |||| ||||||||| | | || | |||||
Sbjct 2477444 CAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 2477503
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || || ||||| || | |||||| || || ||| ||||| ||
Sbjct 2477504 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTC 2477563
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| |||||| || | |||||| | | || || || | ||||| ||
Sbjct 2477564 CTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCAAGAGTGATGGT 2477623
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || || ||||| ||||| || ||
Sbjct 2477624 CTTGCCAGTCAGGGTTTTTACAAAGATCTG 2477653
>seq6
Length=9412079
Score = 91.5 bits (100), Expect = 3e-13
Identities = 148/211 (70%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| ||||||||||| || ||||||| |||| ||||||||||| | || || ||
Sbjct 6657397 AGCACAAGGTGGAGGGTGAACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGTGGCCGTCC 6657338
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
| ||||||||| || || ||||||||||||||||| || ||| || || || ||
Sbjct 6657337 TGCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGATCAGGAGGGATCCCCTCCTTATCA 6657278
Query 199538 TGAATCTTTTGCTTCACGGATT--CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCG 199595
|| ||||| ||| | ||| | | | |||| | | ||| |||| || |||| |
Sbjct 6657277 TGGATCTTGACCTTGA--TATTCACAATGCTGTCATTGGGTTCCACATTCAGACTGATGG 6657220
Query 199596 TCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||| | || || || |||||||| || ||
Sbjct 6657219 TCTTGTCAGTCAGGGTCTTCACAAATATCTG 6657189
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178818357782945
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |