Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq11 118 1e-21
seq3999 93.3 5e-14
seq1329 93.3 5e-14
seq17 93.3 5e-14
seq8 93.3 5e-14
seq6 93.3 5e-14
seq1 93.3 5e-14
seq15 82.4 9e-11
>seq11
Length=11238946
Score = 118 bits (130), Expect = 1e-21
Identities = 385/588 (65%), Gaps = 25/588 (4%)
Strand=Plus/Plus
Query 110270 TGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGG 110329
|||| || || ||| || | || || ||||| || || | |||||| || ||
Sbjct 5178835 TGACGTACATGTTGAGTGCGACGGAGGCCAGATTACAAACCGCTACCTCGTCGCTGCTGG 5178894
Query 110330 TGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGAT 110389
||||||||| |||||| || || | ||| ||||| ||| |||| |||| ||| |
Sbjct 5178895 TGTATTCCACAATTTCTGTGCATAGATTGCTGCTCTTGATGGTGCCCAGATTCTGCTGGT 5178954
Query 110390 TCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTG 110449
| || ||||| ||||| || |||||||||||||| || || ||||| ||||| |
Sbjct 5178955 TGCTCTTCCTATTGCAGGCATCTTTGTAGAGCATGTATGGAGTGCCGGTTTCAGTCTGGG 5179014
Query 110450 ACTTGAGAATGGCCTTCCATACAT-CGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCC 110508
||| | ||||| | ||| || | | | | | || || || || | |||||
Sbjct 5179015 ACTCTATGATGGCATGCCAAACCTGCTGGGCCTTCACCACACGC-TTGACGCGGCCTTCT 5179073
Query 110509 TCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTA-CACATCAGAAAGACCCTT 110567
| |||||| |||||||| | | |||||| |||| || | ||| ||| || |||
Sbjct 5179074 TTCTCGTATTTGGTGTAGAGCTTCTCAAACTCCTCCCCCCAGCAC-TCATTCAG-CCCGG 5179131
Query 110568 CGCCTT-GTCGGGACAGAAGAGGGACCAAT-----TTCCACCCTCCTCAACCCTCTTCAT 110621
| || ||| ||||| | || ||||| | || || |||| |||||||||||
Sbjct 5179132 GACATTCGTCTGGACACATTAGAGACCAGTCCTGGTT--ACTCTCC---ACCCTCTTCAT 5179186
Query 110622 GAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACC 110681
||||| |||||| |||||||| | |||||||||| | | | ||| || | ||
Sbjct 5179187 GAACAAGTCAGGGATCCACATACCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCTTTTCC 5179246
Query 110682 TTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGAC 110741
||| | ||||| ||||| | ||||| || ||||| ||||| || || |
Sbjct 5179247 AGTGTTCTTCTTCAACTCCAGGAAGTCAAATATATCGGAATGCCAGGGTTCCAGGTACAT 5179306
Query 110742 AGCGATGGATCC------CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATT 110795
|||| | || ||| | || |||||| ||||||||||| ||| ||
Sbjct 5179307 GGCGAAAGCCCCAGGCCTCTTGTTTCCAC---CCTGGTCCACATAGCGTGCGGTGTTGTT 5179363
Query 110796 GAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACC 110843
| | || || ||||| || | || |||| ||| | ||||| || ||
Sbjct 5179364 GTAAACTCTCAGCATGGGGACAAGCCCATTGGAGTTGCCATTGGTGCC 5179411
Score = 98.7 bits (108), Expect = 1e-15
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 9689948 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGTA 9690007
Query 136777 GGGAACAGCTTTTA 136790
|| || ||||||
Sbjct 9690008 CGGGCCAACTTTTA 9690021
>seq3999
Length=8627
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 4995 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 4937
>seq1329
Length=192994
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 77968 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 77910
>seq17
Length=11184067
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 1600594 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 1600652
Score = 89.7 bits (98), Expect = 6e-13
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
|||||||| |||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 447236 TAGCTCAGCTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 447294
>seq8
Length=14690302
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 5214466 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 5214524
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 12102160 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 12102102
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 14569361 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 14569419
>seq6
Length=9412079
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 6759357 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 6759415
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 6759709 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 6759651
>seq1
Length=23260604
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 22731202 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 22731144
>seq15
Length=11516971
Score = 82.4 bits (90), Expect = 9e-11
Identities = 74/93 (80%), Gaps = 0/93 (0%)
Strand=Plus/Plus
Query 109752 GTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGA 109811
||||||||| | ||||||| |||| |||| ||||| || ||||| || || |||||
Sbjct 9311917 GTAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTCCCCAGGATCTGGGCGGTGGA 9311976
Query 109812 AGCTGTGGGCATGGGAGCCATGAGAAGACTGTT 109844
||||||||||||||||||| || || |||||
Sbjct 9311977 GGCTGTGGGCATGGGAGCCAGCAGCAGGCTGTT 9312009
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588925679363000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |