Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq11 196 6e-45 seq15 91.5 2e-13 >seq11 Length=11238946 Score = 196 bits (216), Expect = 6e-45 Identities = 893/1395 (64%), Gaps = 36/1395 (3%) Strand=Plus/Plus Query 105842 TTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGACA 105901 ||||| |||| | ||| | || ||| | | || || |||| ||| || ||||||| Sbjct 5178234 TTCATGTCCTCGTTCCACAACCCCCTCTCCGTCAGGTCTTTGAGGAGGTGAGGGTTGACA 5178293 Query 105902 ATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAG 105961 ||| ||||| || | ||| || | |||||||| | ||||||| ||| | Sbjct 5178294 ATCTGGAACTCCCCGGACAGGACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCTTCGATA 5178353 Query 105962 CATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGA 106021 | || || || |||| ||| || ||||| ||||| || ||||| || || | | ||| Sbjct 5178354 GACTCGTTGTTGCCCAGGATCTGGGCGGTTGAGGCGGTGGGCATCGGGGCTAAGAGCAGA 5178413 Query 106022 CTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGA-G 106080 ||||| | | || | | ||| |||||| || | | |||||| | | | Sbjct 5178414 CTGTTCCTCACGCCGTGCTTGGCGATTTTTTCCTTTAGCAGCTTCCAGTCCAACAGGTCG 5178473 Query 106081 CTTGGTTTCACCTTCCCACATATCAAATTGAAGCAC-CCCTTGG-GACGTGGGAGAACCC 106138 | || || || ||||||| || | ||||| | |||||| ||| ||||| || Sbjct 5178474 GTGGGCGTCTTCT-CCCACATGTCGTACTGAAGGATGCCCTTGCTGACCGGGGAG--CCT 5178530 Query 106139 TCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCG 106198 || | || || || | || | | |||||| || ||||||||||| |||| |||| Sbjct 5178531 TCGTAGGTTTCGTATGGCCCGAGCTCGGCAGCCAGCTCGCAGCTCGCCTCGAGGGCTGCG 5178590 Query 106199 TGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCG 106258 | || ||||| || ||||| | | |||| || ||||| || || | | Sbjct 5178591 TAGTAGATGGTCTCGAAGATCTGGGTGTTCAGAAGCTGAGCTTCGGGGCTTTCGAACGGG 5178650 Query 106259 TAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGT 106318 || || | || ||| | || || | ||| || ||||| | || || || ||||| Sbjct 5178651 TAACGCATGAGGATGAATGCGTCGGCCAAACCCTGGACACCGATTCCTATTGGCCTGTGG 5178710 Query 106319 CGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGG 106375 ||| | || ||||| | ||| || || ||||| |||| | || |||| | Sbjct 5178711 CGCTTGTTGGACTT---CTCAGCTTCGGGCACTGGATAGTAATTAATATCTATGATCTTG 5178767 Query 106376 TTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGA 106435 || | |||||| ||| | ||| || | || ||||||| | | |||||||| || Sbjct 5178768 TTCAAGTTTTTGACAACTACCTTGGTCACAGCAGCTAGTTTTTGAAAGTCAAAAGTCCG- 5178826 Query 106436 GTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCA 106495 ||| | |||| ||| | || |||| || |||| ||| ||||| || ||| Sbjct 5178827 --CTCAGCGGTGACGTACATGTTGAGTGCGACGGAGGCCAGATTACAAACCGCTACCTCG 5178884 Query 106496 TCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAA 106555 || | ||||| || | ||||||||| || | ||| ||||| || || |||| | Sbjct 5178885 TCGCTGCTGGTGTATTCCACAATTTCTGTGCATAGATTGCTGCTCTTGATGGTGCCCAGA 5178944 Query 106556 TTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTC 106615 |||| ||||| ||||| | ||||| ||||| |||||||||||||| || || || || Sbjct 5178945 TTCTGCTGGTTGCTCTTCCTATTGCAGGCATCTTTGTAGAGCATGTATGGAGTGCCGGTT 5179004 Query 106616 TCCGTCTGTGACTTGAGAATTGCCTTCCACACAT-CGGCGGCTGGTACAATGGCGTTGGC 106674 || ||||| |||| | || || | ||| || | | | | || || || ||| | Sbjct 5179005 TCAGTCTGGGACTCTATGATGGCATGCCAAACCTGCTGGGCCTTCACCACACGC-TTGAC 5179063 Query 106675 CCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGC-GTCGG 106733 || || || |||||| || |||||||| ||||||||||| ||| | || || Sbjct 5179064 GCGGCCTTCTTTCTCGTATTTGGTGTAGAGCTTCTCAAACTCCTC-CCCCCAGCACTCAT 5179122 Query 106734 AGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCA---TTGACCACCCTCCTCAACCC 106790 || || || | ||||||||| | |||||||| || || |||| |||| Sbjct 5179123 TCAGCCCGGGACATTCGTCTGGACACATTAGAGACCAGTCCTGGTTACTCTCC---ACCC 5179179 Query 106791 GCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTT 106850 ||||||||| | ||| || ||||||| | || || ||||| | ||| | Sbjct 5179180 TCTTCATGAACAAGTCAGGGATCCACATACCGTAGAAAAGGTCTCTGGCTCTCTGCTCCT 5179239 Query 106851 CGTCACCTTGGTTGAGTCGT-AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCA 106909 | | || ||| || | ||||| ||||| || | ||||| | ||||| || || Sbjct 5179240 CTTTTCCAGTGTT-CTTCTTCAACTCCAGGAAGTCAAATATATCGGAATGCCAGGGTTCC 5179298 Query 106910 AGATAGACTGCGATAG----ATCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGT 106965 || || | |||| || | ||| | | ||| | || | |||||||| || || Sbjct 5179299 AGGTACATGGCGAAAGCCCCAGGCCTCTTG-TTTCCACCCTGGTCCACATAGCGTGCGGT 5179357 Query 106966 GGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAAT 107025 | ||| | || | ||||| || | || |||| || | ||||| || || || Sbjct 5179358 GTTGTTGTAAACTCTCAGCATGGGGACAAGCCCATTGGAGTTGCCATTGGTGCCAGCGAT 5179417 Query 107026 ACGAGATTTATTGGCTCTCA--CATCATGGATGTGCATCCCAATACCCCCAGCCCACTTT 107083 | | | | ||| | || | || | || || || || |||||| |||| Sbjct 5179418 GTAACTTCCCGTAGATCTGATGCAGC--TGACGGCCACACCGATTCCTCCAGCCGACTTG 5179475 Query 107084 GAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTG 107143 ||||| |||| |||| | || || |||| || || | ||| ||| ||||| || Sbjct 5179476 GAGATGAGCGCGCACTGTTTCAGCGTGTCATAAATGCCCTCGATGCTGTCATCCTTCATG 5179535 Query 107144 GCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGT 107203 |||| |||||||| ||||||| ||| || || ||||| ||||| ||||| || || Sbjct 5179536 GCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTGGTACCTGCATTAAAGAGTGTCGGG 5179595 Query 107204 GTTGCGTGAATGAAC 107218 | || || ||||| Sbjct 5179596 GAGGCATGGGTGAAC 5179610 >seq15 Length=11516971 Score = 91.5 bits (100), Expect = 2e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 106492 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCC 106551 |||||| || |||||||||| ||| ||||| |||| ||| || || || || Sbjct 9312816 CTCATCTTTGCTCGTGTACTCTACAATCTCTGTGCACAGATTGCTGGATTTGATGGTGCC 9312875 Query 106552 CAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 106611 || |||| ||||| ||||| ||||||| || ||||||||||||||||| || || || Sbjct 9312876 CAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTATGGTGTGCC 9312935 Query 106612 CGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA 106646 || || || || |||| || || || | ||||| Sbjct 9312936 GGTTTCTGTTTGAGACTCGATGATGGCGTACCACA 9312970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589930393515400