Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq11 196 6e-45
seq15 91.5 2e-13
>seq11
Length=11238946
Score = 196 bits (216), Expect = 6e-45
Identities = 893/1395 (64%), Gaps = 36/1395 (3%)
Strand=Plus/Plus
Query 105842 TTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGACA 105901
||||| |||| | ||| | || ||| | | || || |||| ||| || |||||||
Sbjct 5178234 TTCATGTCCTCGTTCCACAACCCCCTCTCCGTCAGGTCTTTGAGGAGGTGAGGGTTGACA 5178293
Query 105902 ATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAG 105961
||| ||||| || | ||| || | |||||||| | ||||||| ||| |
Sbjct 5178294 ATCTGGAACTCCCCGGACAGGACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCTTCGATA 5178353
Query 105962 CATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGA 106021
| || || || |||| ||| || ||||| ||||| || ||||| || || | | |||
Sbjct 5178354 GACTCGTTGTTGCCCAGGATCTGGGCGGTTGAGGCGGTGGGCATCGGGGCTAAGAGCAGA 5178413
Query 106022 CTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGA-G 106080
||||| | | || | | ||| |||||| || | | |||||| | | |
Sbjct 5178414 CTGTTCCTCACGCCGTGCTTGGCGATTTTTTCCTTTAGCAGCTTCCAGTCCAACAGGTCG 5178473
Query 106081 CTTGGTTTCACCTTCCCACATATCAAATTGAAGCAC-CCCTTGG-GACGTGGGAGAACCC 106138
| || || || ||||||| || | ||||| | |||||| ||| ||||| ||
Sbjct 5178474 GTGGGCGTCTTCT-CCCACATGTCGTACTGAAGGATGCCCTTGCTGACCGGGGAG--CCT 5178530
Query 106139 TCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCG 106198
|| | || || || | || | | |||||| || ||||||||||| |||| ||||
Sbjct 5178531 TCGTAGGTTTCGTATGGCCCGAGCTCGGCAGCCAGCTCGCAGCTCGCCTCGAGGGCTGCG 5178590
Query 106199 TGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCG 106258
| || ||||| || ||||| | | |||| || ||||| || || | |
Sbjct 5178591 TAGTAGATGGTCTCGAAGATCTGGGTGTTCAGAAGCTGAGCTTCGGGGCTTTCGAACGGG 5178650
Query 106259 TAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGT 106318
|| || | || ||| | || || | ||| || ||||| | || || || |||||
Sbjct 5178651 TAACGCATGAGGATGAATGCGTCGGCCAAACCCTGGACACCGATTCCTATTGGCCTGTGG 5178710
Query 106319 CGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGG 106375
||| | || ||||| | ||| || || ||||| |||| | || |||| |
Sbjct 5178711 CGCTTGTTGGACTT---CTCAGCTTCGGGCACTGGATAGTAATTAATATCTATGATCTTG 5178767
Query 106376 TTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGA 106435
|| | |||||| ||| | ||| || | || ||||||| | | |||||||| ||
Sbjct 5178768 TTCAAGTTTTTGACAACTACCTTGGTCACAGCAGCTAGTTTTTGAAAGTCAAAAGTCCG- 5178826
Query 106436 GTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCA 106495
||| | |||| ||| | || |||| || |||| ||| ||||| || |||
Sbjct 5178827 --CTCAGCGGTGACGTACATGTTGAGTGCGACGGAGGCCAGATTACAAACCGCTACCTCG 5178884
Query 106496 TCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAA 106555
|| | ||||| || | ||||||||| || | ||| ||||| || || |||| |
Sbjct 5178885 TCGCTGCTGGTGTATTCCACAATTTCTGTGCATAGATTGCTGCTCTTGATGGTGCCCAGA 5178944
Query 106556 TTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTC 106615
|||| ||||| ||||| | ||||| ||||| |||||||||||||| || || || ||
Sbjct 5178945 TTCTGCTGGTTGCTCTTCCTATTGCAGGCATCTTTGTAGAGCATGTATGGAGTGCCGGTT 5179004
Query 106616 TCCGTCTGTGACTTGAGAATTGCCTTCCACACAT-CGGCGGCTGGTACAATGGCGTTGGC 106674
|| ||||| |||| | || || | ||| || | | | | || || || ||| |
Sbjct 5179005 TCAGTCTGGGACTCTATGATGGCATGCCAAACCTGCTGGGCCTTCACCACACGC-TTGAC 5179063
Query 106675 CCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGC-GTCGG 106733
|| || || |||||| || |||||||| ||||||||||| ||| | || ||
Sbjct 5179064 GCGGCCTTCTTTCTCGTATTTGGTGTAGAGCTTCTCAAACTCCTC-CCCCCAGCACTCAT 5179122
Query 106734 AGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCA---TTGACCACCCTCCTCAACCC 106790
|| || || | ||||||||| | |||||||| || || |||| ||||
Sbjct 5179123 TCAGCCCGGGACATTCGTCTGGACACATTAGAGACCAGTCCTGGTTACTCTCC---ACCC 5179179
Query 106791 GCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTT 106850
||||||||| | ||| || ||||||| | || || ||||| | ||| |
Sbjct 5179180 TCTTCATGAACAAGTCAGGGATCCACATACCGTAGAAAAGGTCTCTGGCTCTCTGCTCCT 5179239
Query 106851 CGTCACCTTGGTTGAGTCGT-AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCA 106909
| | || ||| || | ||||| ||||| || | ||||| | ||||| || ||
Sbjct 5179240 CTTTTCCAGTGTT-CTTCTTCAACTCCAGGAAGTCAAATATATCGGAATGCCAGGGTTCC 5179298
Query 106910 AGATAGACTGCGATAG----ATCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGT 106965
|| || | |||| || | ||| | | ||| | || | |||||||| || ||
Sbjct 5179299 AGGTACATGGCGAAAGCCCCAGGCCTCTTG-TTTCCACCCTGGTCCACATAGCGTGCGGT 5179357
Query 106966 GGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAAT 107025
| ||| | || | ||||| || | || |||| || | ||||| || || ||
Sbjct 5179358 GTTGTTGTAAACTCTCAGCATGGGGACAAGCCCATTGGAGTTGCCATTGGTGCCAGCGAT 5179417
Query 107026 ACGAGATTTATTGGCTCTCA--CATCATGGATGTGCATCCCAATACCCCCAGCCCACTTT 107083
| | | | ||| | || | || | || || || || |||||| ||||
Sbjct 5179418 GTAACTTCCCGTAGATCTGATGCAGC--TGACGGCCACACCGATTCCTCCAGCCGACTTG 5179475
Query 107084 GAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTG 107143
||||| |||| |||| | || || |||| || || | ||| ||| ||||| ||
Sbjct 5179476 GAGATGAGCGCGCACTGTTTCAGCGTGTCATAAATGCCCTCGATGCTGTCATCCTTCATG 5179535
Query 107144 GCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGT 107203
|||| |||||||| ||||||| ||| || || ||||| ||||| ||||| || ||
Sbjct 5179536 GCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTGGTACCTGCATTAAAGAGTGTCGGG 5179595
Query 107204 GTTGCGTGAATGAAC 107218
| || || |||||
Sbjct 5179596 GAGGCATGGGTGAAC 5179610
>seq15
Length=11516971
Score = 91.5 bits (100), Expect = 2e-13
Identities = 113/155 (73%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 106492 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCC 106551
|||||| || |||||||||| ||| ||||| |||| ||| || || || ||
Sbjct 9312816 CTCATCTTTGCTCGTGTACTCTACAATCTCTGTGCACAGATTGCTGGATTTGATGGTGCC 9312875
Query 106552 CAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 106611
|| |||| ||||| ||||| ||||||| || ||||||||||||||||| || || ||
Sbjct 9312876 CAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTATGGTGTGCC 9312935
Query 106612 CGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA 106646
|| || || || |||| || || || | |||||
Sbjct 9312936 GGTTTCTGTTTGAGACTCGATGATGGCGTACCACA 9312970
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589930393515400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |