Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq3530 140 3e-27
seq3 111 1e-18
seq1253 104 2e-16
seq7 86.0 5e-11
>seq3530
Length=2434
Score = 140 bits (154), Expect = 3e-27
Identities = 437/677 (65%), Gaps = 0/677 (0%)
Strand=Plus/Minus
Query 551913 ACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTA 551972
|| ||||| || || ||||| || | || || || | || || ||| ||||| |
Sbjct 1180 ACAGCTTGTGAGAGGGCCAAGAGAACCCTGTCCTCCAGCACCCAGGCCAGCATTGAGATC 1121
Query 551973 GATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGAT 552032
|||||| | |||||||| || || | | || | || | ||||| ||||| ||
Sbjct 1120 GATTCACTGTTTGAGGGCATCGACTTCTACACCTCCATCACCAGGGCTCGTTTTGAGGAG 1061
Query 552033 ATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCA 552092
| ||| ||| || || ||| ||| | || || || || ||| | | |||| |
Sbjct 1060 TTGTGTGGTGACCTTTTCAGAGGAACTCTGGATCCCGTGGAGAAAGCCCTGAAAGATGCC 1001
Query 552093 AAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCT 552152
|| || || || ||| | ||||| | || || |||||||| || |||||||| ||
Sbjct 1000 AAAATGGACAAGAGTAAAATCCATGATGTCGTTCTGGTTGGTGGTTCCACAAGAATCCCC 941
Query 552153 AAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAAT 552212
||||||| || | | || ||||| || || |||| || | || | ||
Sbjct 940 AAAATTCAGAAACTCCTGCAGGATTTCTTCAAGGGCAAGGAATTGAACAAGAGCATCAAC 881
Query 552213 CCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACT 552272
||||| ||||| || || || ||||| || | ||||| || ||||| | ||| |
Sbjct 880 CCAGACGAGGCGGTGGCTTACGGTGCTGCCGTCCAAGCCGCCATTCTGACAGGAGACGTG 821
Query 552273 GATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAA 552332
|| || | || || | | || | ||||| | ||||| || || ||| | ||
Sbjct 820 TCGGATAATATTCAGGATCTGCTTCTGCTGGATGTGGCCCCTCTGTCGCTGGGTATCGAG 761
Query 552333 ACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAA 552392
|||| ||||| | |||||| | || || | || || || || || |||||||
Sbjct 760 ACAGCAGGAGGAGTCATGACTGCCTTGATTGAGCGCAACACCACCATCCCCACTAAAAAA 701
Query 552393 TCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAA 552452
| | || || | || ||||| || || || | | || || ||| | | ||||
Sbjct 700 ACACAGGTCTTCACCACCTATTCTGACAACCAGCCGGGGGTCCTCATCCAAGTGTATGAA 641
Query 552453 GGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATT 552512
||||||||| | || || || || || | || || | ||| | | || |
Sbjct 640 GGAGAAAGAGCCATGACCAAGGACAACAACCTCCTGGGCAAGTTTGAGCTGTCGGGCCTC 581
Query 552513 CCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGA 552572
|| |||||||| || || || ||||| || || || || ||||||||||||||||| ||
Sbjct 580 CCGCCTGCTCCCCGAGGGGTCCCGCAGATCGAGGTCACCTTCGATATCGATGCCAACGGC 521
Query 552573 ATTTTGAATGTGACTGC 552589
|||||||| ||| ||||
Sbjct 520 ATTTTGAACGTGTCTGC 504
>seq3
Length=13093193
Score = 111 bits (122), Expect = 1e-18
Identities = 430/673 (64%), Gaps = 2/673 (0%)
Strand=Plus/Plus
Query 551913 ACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTA 551972
|| || ||||| | ||||| || |||| || || | || || ||| || ||| |
Sbjct 6071885 ACGGCCTGCGAGCGCGCCAAGCGGACTCTGTCCTCCAGCACCCAGGCCAGCATCGAAATC 6071944
Query 551973 GATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGAT 552032
|| || | |||||||| || || | | || | || | || ||| ||||||||
Sbjct 6071945 GACTCTCTGTTTGAGGGCATCGACTTCTACACCTCCATCACAAGAGCCCGGTTTGAAGAG 6072004
Query 552033 ATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCA 552092
| |||||| ||||| ||| ||| | || || ||||| | | ||| ||| |
Sbjct 6072005 CTCAATTCTGAGCTCTTCAGAGGAACCCTGGACCCGGTAGAGAAGGCTTTGCAGGATGCC 6072064
Query 552093 AAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCT 552152
||| | |||||| ||| | || ||||| || ||||| ||||| || || ||||||||
Sbjct 6072065 AAGCTGGATAAAACCAGCATCCACGAAATCGTTCTTGTCGGTGGCTCCACGAGAATTCCC 6072124
Query 552153 AAAATTCGCGAAATGTTA-AGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAA 552211
||||| | | | || || ||| ||| || || | | | | || | || | ||
Sbjct 6072125 AAAATCCAAAAGCTCTTGCAGGACTTCTTT-AACGGCAGAGAGCTGAACAAGAGCATCAA 6072183
Query 552212 TCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAAC 552271
||||||||| ||||| |||||||| || || | || || || || || || | ||
Sbjct 6072184 TCCAGATGAAGCTGTGGCCTATGGCGCAGCGGTCCAGGCCGCCATCCTCATGGGCGACAC 6072243
Query 552272 TGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGA 552331
| || || | || || | | || | ||||| |||| || ||||| ||| | ||
Sbjct 6072244 TTCAGAGAATGTCCAGGATCTCCTGCTGCTGGATGTGGCTCCGCTCTCTCTGGGTATCGA 6072303
Query 552332 AACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAA 552391
|| | || || | ||||| ||| ||| | | || || || || || || |
Sbjct 6072304 GACCGCCGGTGGGGTGATGACACCTCTCATCAAGCGGAACACCACCATCCCCACCAAGCA 6072363
Query 552392 ATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGA 552451
| | | || || || || || || || || | | ||| ||||| | | |||
Sbjct 6072364 GACCCAGATCTTCTCCACATACTCGGACAACCAGCCAGGTGTGCTGATTCAGGTGTATGA 6072423
Query 552452 AGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTAT 552511
|| || ||| | || || || || || | || || | ||| | | || ||
Sbjct 6072424 GGGCGAGAGAGCCATGACCAAGGACAACAACCTCCTGGGCAAATTTGAACTCACCGGCAT 6072483
Query 552512 TCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGG 552571
|||||| |||||||| || || ||||| || || || || ||||| ||||| ||||| ||
Sbjct 6072484 TCCTCCCGCTCCTCGGGGCGTGCCGCAGATAGAGGTGACGTTCGACATCGACGCCAACGG 6072543
Query 552572 AATTTTGAATGTG 552584
|| |||| |||
Sbjct 6072544 CATCCTGAACGTG 6072556
Score = 102 bits (112), Expect = 7e-16
Identities = 173/248 (70%), Gaps = 6/248 (2%)
Strand=Plus/Plus
Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054
|| || || ||| | || ||||| || || || || |||| || | || |||||
Sbjct 6071111 ATTGGCATTGATCTGGGCACCACCTACTCCTGCGTGGGAGTTTTCCAGCACGGCAAAGTG 6071170
Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114
|| ||||||||||| ||||| |||||||| || ||||| ||||| | ||||| ||
Sbjct 6071171 GAGATTATTGCCAACGATCAGGGTAACAGGACCACTCCCAGCTATGTGGCCTTCACTGAC 6071230
Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCA---AGCCACTGGTAATCCTACCAAT 550171
|| || | | || ||||| || ||| | || |||| || || || |||||
Sbjct 6071231 ACAGAGAGGCTGATCGGAGATGCTGCCAAAAACCAGGTTGCCA-TG--AACCCCACCAAC 6071287
Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231
|| || |||||||| |||||| | || || || | ||||| ||| |||| || ||| ||
Sbjct 6071288 ACAATCTTTGATGCCAAACGTCTTATCGGTAGGAAGTTTAACGATGCGACGGTCCAGTCA 6071347
Query 550232 GATATGAA 550239
|| |||||
Sbjct 6071348 GACATGAA 6071355
>seq1253
Length=284903
Score = 104 bits (114), Expect = 2e-16
Identities = 101/130 (78%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457
|||| ||||| || || ||||| || || ||||| || || || ||||| || || ||||
Sbjct 226174 ATGCTGTAATTACGGTGCCAGCCTACTTCAATGATTCGCAGCGCCAAGCCACAAAGGATG 226233
Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517
| || || |||| || |||||||| ||||| || |||||||| |||||||||||
Sbjct 226234 CCGGCACAATCTCTGGCCTCAATGTTCTGCGTATCATTAATGAACCAACTGCTGCTGCTA 226293
Query 550518 TTGCATATGG 550527
||||||||||
Sbjct 226294 TTGCATATGG 226303
Score = 86.0 bits (94), Expect = 5e-11
Identities = 107/147 (73%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057
||||| ||| | ||||| || || ||||||||||| | ||| |||| |||||||||
Sbjct 225443 GGTATCGATCTGGGAACAACCTACTCCTGTGTTGGTGTGTTTCAACATGGAAAAGTTGAA 225502
Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117
|| |||||||||||||| || ||||| || || || || || ||||||| || |
Sbjct 225503 ATCATTGCCAATGATCAGGGCAACAGGACCACACCCAGCTACGTGGCTTTCACTGACTCA 225562
Query 550118 GAACATTTAGTTGGTGATGCAGCAAAA 550144
|| | |||| |||||||| |||
Sbjct 225563 GAGAGGCTGATTGGAGATGCAGCCAAA 225589
>seq7
Length=14304132
Score = 86.0 bits (94), Expect = 5e-11
Identities = 103/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457
|||| || || || || || || || || |||||||| || || ||||| || |||||||
Sbjct 10632395 ATGCTGTCATCACAGTTCCTGCTTACTTCAATGACTCCCAGCGCCAAGCCACCAAAGATG 10632454
Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517
|||| || ||||| || ||||| || || || ||||| ||||| || || || ||
Sbjct 10632455 CTGGGACCATCGCTGGGCTCAATGTGCTGCGCATCATCAACGAACCCACAGCCGCAGCCA 10632514
Query 550518 TTGCATATGGACTTGATAAA 550537
| || ||||| || || |||
Sbjct 10632515 TCGCTTATGGCCTGGACAAA 10632534
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4028934534374150
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