Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq10 154 1e-32 seq45 102 7e-17 >seq10 Length=9126174 Score = 154 bits (170), Expect = 1e-32 Identities = 135/168 (80%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 30150 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30209 ||||| ||||||||| || || || ||||||||||||||||||||||| || ||||| || Sbjct 6096156 CATGTTCGTGTACTCGGCACCAAAGTGCCTCCACTGGAACCCGTACACAGGGCCCAGATC 6096097 Query 30210 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30269 |||||| || | || || ||| ||||||| ||| | || ||||||||||| || Sbjct 6096096 TCCCTCCTCTCGGTCGGTGAGCCCCAGATTGTCCAGAAAAGCCCTAGAACCGTTGGCTTC 6096037 Query 30270 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 30317 ||| |||||||| || ||||| ||||||||||||| |||||||| || Sbjct 6096036 CCAAATCTTTACTCCTTTCTCTGAGAGCTCTTTGGCATTTGTGGATCC 6095989 Score = 149 bits (164), Expect = 5e-31 Identities = 130/162 (80%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 29869 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 29928 || || |||| || || |||||||| || || || | |||||||||||||| ||||| Sbjct 6096601 AGTCCTGTGATATGTGCAATCATGTAGGTCAGAAGTGCATAGCTGGCGATGTTGAAGGGC 6096542 Query 29929 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 29988 |||||||| ||||| |||||||| | |||||| ||||| ||||| ||||| ||||| | | Sbjct 6096541 ACCCCGAGGCCCATATCCCCCGAGCGCTGGTACAGCTGGCACGACAGCTCGCCGTCACAC 6096482 Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATG 30030 ||||| ||||| |||| | |||||| || || ||||||||| Sbjct 6096481 ACGTAGAACTGGCACAGAGCGTGGCAGGGTGGCAGAGCCATG 6096440 >seq45 Length=142330 Score = 102 bits (112), Expect = 7e-17 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 112111 CTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGAGAAC 112170 |||||||| || | ||| ||||||| |||||||| || |||| |||||||||||| Sbjct 135684 CTGCTGAGAACGATGTTGATCCTGTTGGCCAGAGGTCGGTTTCTTTCTGGGATGGAGAAC 135625 Query 112171 CAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 112209 || |||||||| ||||| ||||||||||||||||| ||| Sbjct 135624 CAGGTCTTTCTGCCCATGATCACCACGTTCTGCTTCCCT 135586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408583561515455