Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq1226 127 4e-24
seq12 109 1e-18
seq15 95.1 2e-14
>seq1226
Length=411779
Score = 127 bits (140), Expect = 4e-24
Identities = 112/137 (82%), Gaps = 2/137 (1%)
Strand=Plus/Plus
Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932
|| ||||| |||||||||||||||| |||||||| || || ||| || || |||||
Sbjct 204509 GGAGAGCGCGTGGTAGCCTTTGCTGCCGTGGAGGGTATTTTCTTCTCTGGGTCCTTTGCT 204568
Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCT 25991
||||||||||||| ||| | |||||| | |||||||| ||| ||| |||||||||||
Sbjct 204569 TCCATCTTCTGGCTGAAG-AAAAGGGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCT 204627
Query 25992 CATCAGCAGGGACGAGG 26008
||||||||| |||||||
Sbjct 204628 CATCAGCAGAGACGAGG 204644
>seq12
Length=10661439
Score = 109 bits (120), Expect = 1e-18
Identities = 108/137 (79%), Gaps = 2/137 (1%)
Strand=Plus/Plus
Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932
|| || || ||||| || ||||| || |||||||||||||| ||| || ||||| |||
Sbjct 1964140 GGGGAACGACTGGTGGCATTTGCAGCAGTGGAGGGCATCTTCTTCTCTGGCTCGTTCGCG 1964199
Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCT 25991
|||||| |||||| ||| | |||||||| |||||| || || || ||| || |||||
Sbjct 1964200 TCCATCTACTGGCTGAAG-AAAAGGGGACTCATGCCGGGCCTCACCTATTCTAATGAGCT 1964258
Query 25992 CATCAGCAGGGACGAGG 26008
||||||||| || ||||
Sbjct 1964259 CATCAGCAGAGATGAGG 1964275
>seq15
Length=11516971
Score = 95.1 bits (104), Expect = 2e-14
Identities = 96/125 (77%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 221123 ACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGATG 221182
|| || || ||||||||||| ||||| | | ||| | ||| ||| | | ||||||
Sbjct 9311885 ACCTGAAACTCTCCCGAGAGAACCCTGCGCGTGTAGATGTTGCTGGTGTAGGCCTCGATG 9311944
Query 221183 CTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAGA 221242
||||||||| ||||||||||| || ||| ||| ||||||||||| |||| ||||||
Sbjct 9311945 GACTCGTTGTTCCCCAGGATCTGGGCGGTGGAGGCTGTGGGCATGGGAGCCAGCAGCAGG 9312004
Query 221243 CTGTT 221247
|||||
Sbjct 9312005 CTGTT 9312009
Score = 87.8 bits (96), Expect = 3e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 222040 CATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCAC 222099
||| |||||||| |||||||||| || || |||||||||| || |||||||||
Sbjct 9313271 CATAAAGAGGTCTGGGATCCACAAAGCGAAGAACAGATCTCTGGCCCTCTGCTCCTCTTT 9313330
Query 222100 GCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATA 222159
||| |||| || |||| |||| ||| |||| | || | |||||||||||||| ||
Sbjct 9313331 GCCAGTGTTCTTTTTCAGCTCCAGGAACGCAAACACATCGGAATGCCACGGCTCCAGGTA 9313390
Query 222160 GACGGCCAGAGCGCCGGGTCGCT 222182
|| || | || || |||| ||
Sbjct 9313391 CACAGCAAAGGCTCCAGGTCTCT 9313413
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928765441822400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |