Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1226 127 4e-24 seq12 109 1e-18 seq15 95.1 2e-14 >seq1226 Length=411779 Score = 127 bits (140), Expect = 4e-24 Identities = 112/137 (82%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 || ||||| |||||||||||||||| |||||||| || || ||| || || ||||| Sbjct 204509 GGAGAGCGCGTGGTAGCCTTTGCTGCCGTGGAGGGTATTTTCTTCTCTGGGTCCTTTGCT 204568 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCT 25991 ||||||||||||| ||| | |||||| | |||||||| ||| ||| ||||||||||| Sbjct 204569 TCCATCTTCTGGCTGAAG-AAAAGGGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCT 204627 Query 25992 CATCAGCAGGGACGAGG 26008 ||||||||| ||||||| Sbjct 204628 CATCAGCAGAGACGAGG 204644 >seq12 Length=10661439 Score = 109 bits (120), Expect = 1e-18 Identities = 108/137 (79%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 || || || ||||| || ||||| || |||||||||||||| ||| || ||||| ||| Sbjct 1964140 GGGGAACGACTGGTGGCATTTGCAGCAGTGGAGGGCATCTTCTTCTCTGGCTCGTTCGCG 1964199 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCT 25991 |||||| |||||| ||| | |||||||| |||||| || || || ||| || ||||| Sbjct 1964200 TCCATCTACTGGCTGAAG-AAAAGGGGACTCATGCCGGGCCTCACCTATTCTAATGAGCT 1964258 Query 25992 CATCAGCAGGGACGAGG 26008 ||||||||| || |||| Sbjct 1964259 CATCAGCAGAGATGAGG 1964275 >seq15 Length=11516971 Score = 95.1 bits (104), Expect = 2e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 221123 ACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGATG 221182 || || || ||||||||||| ||||| | | ||| | ||| ||| | | |||||| Sbjct 9311885 ACCTGAAACTCTCCCGAGAGAACCCTGCGCGTGTAGATGTTGCTGGTGTAGGCCTCGATG 9311944 Query 221183 CTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAGA 221242 ||||||||| ||||||||||| || ||| ||| ||||||||||| |||| |||||| Sbjct 9311945 GACTCGTTGTTCCCCAGGATCTGGGCGGTGGAGGCTGTGGGCATGGGAGCCAGCAGCAGG 9312004 Query 221243 CTGTT 221247 ||||| Sbjct 9312005 CTGTT 9312009 Score = 87.8 bits (96), Expect = 3e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 222040 CATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCAC 222099 ||| |||||||| |||||||||| || || |||||||||| || ||||||||| Sbjct 9313271 CATAAAGAGGTCTGGGATCCACAAAGCGAAGAACAGATCTCTGGCCCTCTGCTCCTCTTT 9313330 Query 222100 GCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATA 222159 ||| |||| || |||| |||| ||| |||| | || | |||||||||||||| || Sbjct 9313331 GCCAGTGTTCTTTTTCAGCTCCAGGAACGCAAACACATCGGAATGCCACGGCTCCAGGTA 9313390 Query 222160 GACGGCCAGAGCGCCGGGTCGCT 222182 || || | || || |||| || Sbjct 9313391 CACAGCAAAGGCTCCAGGTCTCT 9313413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928765441822400