Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_019529.1 Length=111506 Score E Sequences producing significant alignments: (Bits) Value seq899 84.2 2e-11 seq164 82.4 5e-11 >seq899 Length=36145 Score = 84.2 bits (92), Expect = 2e-11 Identities = 198/290 (68%), Gaps = 18/290 (6%) Strand=Plus/Plus Query 108272 AGCAGCAGAAGCAACTGGTCAAGCAGGTACAGCTACAGAACAAGCAAAAGCAGCGAAGGC 108331 |||||||| | || | | | ||||| |||| ||| | |||| |||||| | || Sbjct 487 AGCAGCAGCAACAGCAGCTACAGCAG---CAGCAGCAGTAGCAGCAGCAGCAGCTACAGC 543 Query 108332 ATCTgcaacaaaagcag-agcaagaacaaca--agcagcactagcagcccaaaaggcagc 108388 | | |||||| ||||| |||| | | ||| ||||||| |||||| | ||||| Sbjct 544 AGCAGCAACAGCAGCAGCAGCAGCAGCTACAGCAGCAGCAGCAGCAGCTACAGTAGCAGC 603 Query 108389 agaaaaagcGAGAGACGCAGCTAAATCTTCTGAAACAGCAGCAGCTCAATCAGCAG--GC 108446 || | ||| | || ||||| | || | | | ||||||||||| | |||||| || Sbjct 604 AGCAGCAGCTACAGCAGCAGCAGCAGCTACAGCAGCAGCAGCAGCTACAGCAGCAGCAGC 663 Query 108447 AGC----GCATATAGCTACCAACAG--GCAGCTAAAGCATCTGAAGATAAAGCAGACCAA 108500 ||| ||| ||||| || ||| ||||||| |||| | | || || ||||| || Sbjct 664 AGCTACAGCA-GCAGCTAGCAGCAGCAGCAGCTACAGCAGCAGCAGCTACAGCAG--CAG 720 Query 108501 TACCAAGCTGCGGCAGCCACTTCAGCCGCAGATGCAGCTGCATCAGCAGC 108550 | | ||| || ||||| || |||| |||| | |||| ||| ||||||| Sbjct 721 CAGC-AGCAGCAGCAGCTACAGCAGCAGCAGCTACAGCAGCAGCAGCAGC 769 >seq164 Length=75096 Score = 82.4 bits (90), Expect = 5e-11 Identities = 222/325 (68%), Gaps = 20/325 (6%) Strand=Plus/Plus Query 108272 AGCAGCAGAAGCAACTGGTCAAGCAGGTACAGCTACAGAACAAGCAAAAGCAGCGAAGGC 108331 |||||||| |||| || ||||| ||||||||| | |||| |||||| | || Sbjct 790 AGCAGCAGCAGCAGCTACAGCAGCAGCAGCAGCTACAGCAGCAGCAGCAGCAGCTACAGC 849 Query 108332 ATCTgcaacaaaagcag-agcaagaacaacaagcagca-ctagcagcccaaaaggcagca 108389 | | ||| | | ||||| ||| | | || || |||||| ||| |||| | |||||| Sbjct 850 AGCAGCAGCTACAGCAGCAGCTACAGCAGCA-GCAGCAGCTA-CAGCAGCA---GCAGCA 904 Query 108390 gaaaaagcG--AG-AGACGCAGCTAAATCTTCTGAA---ACAGCAGCAGCTCAATCAGCA 108443 | | ||| || || ||||||| | | | | | |||||||||||| | ||||| Sbjct 905 GCTACAGCAGCAGCAGCAGCAGCTACAGCAGCAGCAGCTACAGCAGCAGCTACAGCAGCA 964 Query 108444 GGCAGCGCATATAGCTACCAACAG--GCAGCTAAAGCATCTGAAGATAAAGCAGACCAAT 108501 ||||| || ||| | || ||| ||||||| |||| | | || || ||||| || Sbjct 965 -GCAGCAGCTACAGC-AGCAGCAGCAGCAGCTACAGCAGCAGCAGCTACAGCAG--CAGC 1020 Query 108502 ACCAAGCTGCGGCAGCCACTTCAGCCGCAGATGCAGCTGCATCAGCAGCGTCAATGACAC 108561 | | ||| || ||||| || |||| |||| ||||| ||| ||||||| || ||| Sbjct 1021 AGC-AGCAGCAGCAGCAGCTACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCTACAG 1079 Query 108562 AATCTGTAGCAGACGCAACAGCAGC 108586 | | | ||||| || |||||||| Sbjct 1080 CAGCAGCAGCAGCAGCTACAGCAGC 1104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356664686799145