Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_020474.2
Length=180421
Score E
Sequences producing significant alignments: (Bits) Value
seq9 219 5e-52
>seq9
Length=13922460
Score = 219 bits (242), Expect = 5e-52
Identities = 581/877 (66%), Gaps = 34/877 (4%)
Strand=Plus/Plus
Query 160098 TCGAATTTATTTGCGAACAGATGGTGAGCGTTCTGT---AGGATCCAGTGCACGTCTCCG 160154
||||| || |||||||| || || | ||||| |||| ||| || | ||| ||
Sbjct 8683645 TCGAACTTGTTTGCGAATAGTTGTT------TCTGTGCGAGGAGCCACTGGATGTCCCCT 8683698
Query 160155 GACCCGAACACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCT 160214
||| |||| || || | | ||| | ||| |||| || |||| | || ||
Sbjct 8683699 ACTCCGTACACACACACCGCTCTCCTGTAGTCCCCGGTGCAGGGTCGGTATGGGGCCCCC 8683758
Query 160215 TTCGCCACGTCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCG 160274
|||| ||||| | |||| |||||| || | | || | ||| |||||||
Sbjct 8683759 AGTTCCACATCACCCGCCAAGTAGCTCCACTTGACCACGCGCGCCAGGGCCAGCATGTCC 8683818
Query 160275 GAGGTGTCGTATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGG 160334
|| |||||||| |||| | |||| | | ||||| || |||||| | ||| |||
Sbjct 8683819 GACGTGTCGTACTTGTTGTTGTGGGGCAATGACCCGGGGACTGTGGGCATCCTCTGCAGG 8683878
Query 160335 GTGGCCCACAGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCG 160394
|||||||||||||| ||||| || ||||| |||||||| ||| |||| || |||
Sbjct 8683879 GTGGCCCACAGGTGCTCGTCCGGACTGTAGGTGTCCTTCTCCCACTCCAGGAGCTCC--- 8683935
Query 160395 ATTAACCT----GTCCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGC 160450
| |||| ||| || ||||| ||| | | ||| | ||| || ||||| ||
Sbjct 8683936 -TGCACCTTTGCGTCTGTCATCACGTGTTGCACGAAAGTTCTCGACACCACGAAGTAGGC 8683994
Query 160451 GCTGCCGGAGAATATCGGTATGGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTA-G 160509
| |||||||| || || | ||| ||||| | | ||| ||| || |||| |
Sbjct 8683995 ATTTCCGGAGAACATGGGCGTTTTTATGGGCGGGGGGCTTTTCTCC--ACGTCTGTTCTG 8684052
Query 160510 A-CACCACTCCTTTCACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGC--GGTG 160566
| |||| | | | ||| | ||| | | | ||||| | || | |||| | | ||
Sbjct 8684053 ATCACCTCATCCGTGACCTG---GTGGTGGTACAGCCACCGGCCCTTTTTGTTCTCGTTG 8684109
Query 160567 GCATGCGTTCCGTCTCTAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCT 160626
| || || | ||| | ||||| || | || | |||||| || || ||||
Sbjct 8684110 G--TGGTCTCGGACTCCATGCTGTTCCTGCCCTTCAGGGTCTTCAGCGTCTGCACCATCT 8684167
Query 160627 CTAGGTTCGTCTTGAGCGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCG 160686
| ||| || |||| || ||||||| ||||| ||| | || ||||||||||||
Sbjct 8684168 CCCTGTTGGTTTTGATGGGGAAGTCGGCCCCGCATGTGTTCAGCATGTACTTCCATTTAA 8684227
Query 160687 CGCTCAGGTCGTGCAGGTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAG 160746
| | ||| |||| || |||||||| || | || ||||| |||||| ||| || |
Sbjct 8684228 CCTTGGAGTCCAGCAGATCTCTCATGCAGTTCAAGTCCGCCTGTACGCGGGACCACGACG 8684287
Query 160747 CGTACACTACGTTCTCTAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTC 160806
||||||| ||| | |||| ||| |||||| || |||||| || || || | || |
Sbjct 8684288 CGTACACCACGCTTTCTAATTTGGTGGCCAGGAACACGTTAGGGAGGCAGGAAATAATCC 8684347
Query 160807 CCACCACCGCCAGAAAGAA--CATCTTATCCGCCTTTC-GGTCCACGTGCACGCAATACA 160863
|||| || ||| ||| |||| | | |||| | ||||| || ||||| || |
Sbjct 8684348 CCACGACGGCCGCCTTGAATTCATCCT---TGGATTTCTGATCCACATGAACGCAGTAGA 8684404
Query 160864 GGTTCTGAGGCGCGTAGATGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGA 160923
||||||||| | ||||||||||| || | || |||||||||||| || || | |||||
Sbjct 8684405 CGTTCTGAGGGGTGTAGATGGCCCGCAGGAGCCGCTCGAACATCTCGATGTTGTCATGGA 8684464
Query 160924 TCACGATAGAGTAGGCTATCGGAAACTCGGTCTCCTC 160960
|||| || ||||| || || || || || |||||||
Sbjct 8684465 TCACCATGGAGTAAGCGATGGGGAAGTCTCTCTCCTC 8684501
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 577169883834600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |