Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq9 219 5e-52 >seq9 Length=13922460 Score = 219 bits (242), Expect = 5e-52 Identities = 581/877 (66%), Gaps = 34/877 (4%) Strand=Plus/Plus Query 160098 TCGAATTTATTTGCGAACAGATGGTGAGCGTTCTGT---AGGATCCAGTGCACGTCTCCG 160154 ||||| || |||||||| || || | ||||| |||| ||| || | ||| || Sbjct 8683645 TCGAACTTGTTTGCGAATAGTTGTT------TCTGTGCGAGGAGCCACTGGATGTCCCCT 8683698 Query 160155 GACCCGAACACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCT 160214 ||| |||| || || | | ||| | ||| |||| || |||| | || || Sbjct 8683699 ACTCCGTACACACACACCGCTCTCCTGTAGTCCCCGGTGCAGGGTCGGTATGGGGCCCCC 8683758 Query 160215 TTCGCCACGTCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCG 160274 |||| ||||| | |||| |||||| || | | || | ||| ||||||| Sbjct 8683759 AGTTCCACATCACCCGCCAAGTAGCTCCACTTGACCACGCGCGCCAGGGCCAGCATGTCC 8683818 Query 160275 GAGGTGTCGTATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGG 160334 || |||||||| |||| | |||| | | ||||| || |||||| | ||| ||| Sbjct 8683819 GACGTGTCGTACTTGTTGTTGTGGGGCAATGACCCGGGGACTGTGGGCATCCTCTGCAGG 8683878 Query 160335 GTGGCCCACAGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCG 160394 |||||||||||||| ||||| || ||||| |||||||| ||| |||| || ||| Sbjct 8683879 GTGGCCCACAGGTGCTCGTCCGGACTGTAGGTGTCCTTCTCCCACTCCAGGAGCTCC--- 8683935 Query 160395 ATTAACCT----GTCCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGC 160450 | |||| ||| || ||||| ||| | | ||| | ||| || ||||| || Sbjct 8683936 -TGCACCTTTGCGTCTGTCATCACGTGTTGCACGAAAGTTCTCGACACCACGAAGTAGGC 8683994 Query 160451 GCTGCCGGAGAATATCGGTATGGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTA-G 160509 | |||||||| || || | ||| ||||| | | ||| ||| || |||| | Sbjct 8683995 ATTTCCGGAGAACATGGGCGTTTTTATGGGCGGGGGGCTTTTCTCC--ACGTCTGTTCTG 8684052 Query 160510 A-CACCACTCCTTTCACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGC--GGTG 160566 | |||| | | | ||| | ||| | | | ||||| | || | |||| | | || Sbjct 8684053 ATCACCTCATCCGTGACCTG---GTGGTGGTACAGCCACCGGCCCTTTTTGTTCTCGTTG 8684109 Query 160567 GCATGCGTTCCGTCTCTAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCT 160626 | || || | ||| | ||||| || | || | |||||| || || |||| Sbjct 8684110 G--TGGTCTCGGACTCCATGCTGTTCCTGCCCTTCAGGGTCTTCAGCGTCTGCACCATCT 8684167 Query 160627 CTAGGTTCGTCTTGAGCGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCG 160686 | ||| || |||| || ||||||| ||||| ||| | || |||||||||||| Sbjct 8684168 CCCTGTTGGTTTTGATGGGGAAGTCGGCCCCGCATGTGTTCAGCATGTACTTCCATTTAA 8684227 Query 160687 CGCTCAGGTCGTGCAGGTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAG 160746 | | ||| |||| || |||||||| || | || ||||| |||||| ||| || | Sbjct 8684228 CCTTGGAGTCCAGCAGATCTCTCATGCAGTTCAAGTCCGCCTGTACGCGGGACCACGACG 8684287 Query 160747 CGTACACTACGTTCTCTAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTC 160806 ||||||| ||| | |||| ||| |||||| || |||||| || || || | || | Sbjct 8684288 CGTACACCACGCTTTCTAATTTGGTGGCCAGGAACACGTTAGGGAGGCAGGAAATAATCC 8684347 Query 160807 CCACCACCGCCAGAAAGAA--CATCTTATCCGCCTTTC-GGTCCACGTGCACGCAATACA 160863 |||| || ||| ||| |||| | | |||| | ||||| || ||||| || | Sbjct 8684348 CCACGACGGCCGCCTTGAATTCATCCT---TGGATTTCTGATCCACATGAACGCAGTAGA 8684404 Query 160864 GGTTCTGAGGCGCGTAGATGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGA 160923 ||||||||| | ||||||||||| || | || |||||||||||| || || | ||||| Sbjct 8684405 CGTTCTGAGGGGTGTAGATGGCCCGCAGGAGCCGCTCGAACATCTCGATGTTGTCATGGA 8684464 Query 160924 TCACGATAGAGTAGGCTATCGGAAACTCGGTCTCCTC 160960 |||| || ||||| || || || || || ||||||| Sbjct 8684465 TCACCATGGAGTAAGCGATGGGGAAGTCTCTCTCCTC 8684501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577169883834600