Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq11 228 1e-54 >seq11 Length=11238946 Score = 228 bits (252), Expect = 1e-54 Identities = 958/1490 (64%), Gaps = 42/1490 (3%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| ||||| |||| | | || ||||| ||| |||||| | | Sbjct 5179702 CCGCAGCACATGCTCATGAGGGTTTCTGTGGGGATCCATCAAACAGATATTGATGCAGCG 5179643 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | || || ||| || | |||| | | || ||||| || || | || || ||||| Sbjct 5179642 ATTGAAACCTACAACCTGCTGTCAGAGAAGTG-GTTCACCCATGCCTCCCCGACACTCTT 5179584 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||||| ||||| || || ||| ||||||| |||||||| |||||| ||||| || Sbjct 5179583 TAATGCAGGTACCAACAGGCCACAGCTGTCCAGCTGCTTCCTGCTCGCCATGAAGGATGA 5179524 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | ||| | || || |||| || || | |||| |||| ||||| |||| |||||| Sbjct 5179523 CAGCATCGAGGGCATTTATGACACGCTGAAACAGTGCGCGCTCATCTCCAAGTCGGCTGG 5179464 Query 75451 GGGTATTGGGATGCACATCCATGATG--TGAGAGCCAATAAATCTCGTATTCGGGGGACA 75508 || || || || | || | || | ||| | | | | || || || Sbjct 5179463 AGGAATCGGTGTGGCCGTCA--GCTGCATCAGATCTACGGGAAGTTACATCGCTGGCACC 5179406 Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568 ||||| | || |||| || | || ||||| | || | ||| ||| || |||||| Sbjct 5179405 AATGGCAACTCCAATGGGCTTGTCCCCATGCTGAGAGTTTACAACAACACCGCACGCTAT 5179346 Query 75569 GTAAATCAAGCGGGGCGTCGCAAG------GGGTCCATCGCGGTCTACTTGGAACCATGG 75622 || | || ||| | |||| ||| | |||| | ||| ||||||| ||| Sbjct 5179345 GTGGACCA---GGGTGGAAACAAGAGGCCTGGGGCTTTCGCCATGTACCTGGAACCCTGG 5179289 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTT-ACGACTCAACCAAGGTGACGAAGAGGCTCG 75681 ||| ||||||| | || ||||| ||||| | || ||| || | || ||| | Sbjct 5179288 CATTCCGATATATTTGACTTCCTGGAGTTGAAGAAG-AACACTGGAAAAGAGGAGCAGAG 5179230 Query 75682 GTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGA 75741 ||||| || || | ||||||| || ||| | ||||||||| |||| ||| Sbjct 5179229 AGCCAGAGACCTTTTCTACGGTATGTGGATCCCTGACTTGTTCATGAAGAGGGT---GGA 5179173 Query 75742 GGGTGGTCAA---TGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGAC-GCGG 75797 | || || |||||||| | ||||||||| | || || || || || | Sbjct 5179172 GAGTAACCAGGACTGGTCTCTAATGTGTCCAGACGAATGTCCCGGGCTGAATGAGTGCTG 5179113 Query 75798 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGA 75857 ||| ||||||||||| |||||||| || || || | || || | | ||| ||| Sbjct 5179112 GGGG-GAGGAGTTTGAGAAGCTCTACACCAAATACGAGAAAGAAGGCCGCGTCAA-GCGT 5179055 Query 75858 CTGTACCAGCCGCCG-ATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACA 75916 || || | | | | |||||| | || || | | || ||||| || || || || Sbjct 5179054 GTGGTGAAGGCCCAGCAGGTTTGGCATGCCATCATAGAGTCCCAGACTGAAACCGGCACT 5178995 Query 75917 CCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACA 75976 ||||| ||||| ||||| ||||| || || | |||||| ||||| ||||| |||| || Sbjct 5178994 CCATACATGCTCTACAAAGATGCCTGCAATAGGAAGAGCAACCAGCAGAATCTGGGCACC 5178935 Query 75977 ATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCT 76036 ||||||||| ||||| ||||| |||||| | || ||||| | || ||| || Sbjct 5178934 ATCAAGAGCAGCAATCTATGCACAGAAATTGTGGAATACACCAGCAGCGACGAGGTAGCG 5178875 Query 76037 GTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTT 76096 ||||| ||| |||| || |||| || | ||| |||| | ||| || |||||| Sbjct 5178874 GTTTGTAATCTGGCCTCCGTCGCACTCAACATGTACGTCACCGCTGAG---CGGACTTTT 5178818 Query 76097 GATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATT 76156 || | | ||||||| || | || ||| | ||| |||||| | ||| |||| Sbjct 5178817 GACTTTCAAAAACTAGCTGCTGTGACCAAGGTAGTTGTCAAAAACTTGAACAAGATCATA 5178758 Query 76157 GACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCT 76213 || | |||| ||||| || || ||| | ||||| || | ||| ||||| || Sbjct 5178757 GATATTAATTACTATCCAGTGCCCGAAGCTGAG---AAGTCCAACAAGCGCCACAGGCCA 5178701 Query 76214 ATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGAT 76273 || || | ||||| || ||| | || || | ||| || | || ||| | || || Sbjct 5178700 ATAGGAATCGGTGTCCAGGGTTTGGCCGACGCATTCATCCTCATGCGTTACCCGTTCGAA 5178641 Query 76274 TCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTG 76333 ||||| || |||| | | ||||| || ||||| || ||||| |||| Sbjct 5178640 AGCCCCGAAGCTCAGCTTCTGAACACCCAGATCTTCGAGACCATCTACTACGCAGCCCTC 5178581 Query 76334 GAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCC 76393 |||||||| || || |||||| | | || | || || || | || || ||||| Sbjct 5178580 GAGGCGAGCTGCGAGCTGGCTGCCGAGCTCGGGCCATACGAAACCTACGAAGG--CTCCC 5178523 Query 76394 GCGTC-CCAAGGG-GTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGC-TCAACTAC 76450 ||| |||||| | ||||||| || ||||||| || || || | | | | Sbjct 5178522 CGGTCAGCAAGGGCATCCTTCAGTACGACATGTGGG-AGAAGACGCCCACCGACCTGTTG 5178464 Query 76451 GACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATG 76510 |||||| | | || |||||| ||| || | || | | |||||||| | | Sbjct 5178463 GACTGGAAGCTGCTAAAGGAAAAAATCGCCAAGCACGGCGTGAGGAACAGTCTGCTCTTA 5178404 Query 76511 GCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCA 76570 || || ||||| || ||||| ||||| || ||| |||| || || || | | ||| | Sbjct 5178403 GCCCCGATGCCCACCGCCTCAACCGCCCAGATCCTGGGCAACAACGAGTCTATCGAAGCC 5178344 Query 76571 TACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAG 76630 ||||| | ||||||||| | || ||| | || ||||| ||||||||| Sbjct 5178343 TACACCAGCAACATCTACACCCGCAGGGTCCTGTCCGGGGAGTTCCAGATTGTCAACCCT 5178284 Query 76631 CACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAA 76680 |||||| |||| ||||| | | ||| || | ||| | |||| ||||| Sbjct 5178283 CACCTCCTCAAAGACCTGACGGAGAGGGGGTTGTGGAACGAGGACATGAA 5178234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596518630584800