Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq11 140 1e-27
seq8 86.0 2e-11
>seq11
Length=11238946
Score = 140 bits (154), Expect = 1e-27
Identities = 494/758 (65%), Gaps = 18/758 (2%)
Strand=Plus/Plus
Query 155400 AATGTGTCGGCTAAACCCTGAACTCCAATACCGACTGGGCGATGCCTGTAATTGCTCCTG 155459
|||| |||||| |||||||| || || || || | ||| | || | | ||| | |
Sbjct 5178666 AATGCGTCGGCCAAACCCTGGACACCGATTCCTATTGGCCTGTGGCGCTTGTTGGACTT- 5178724
Query 155460 CTTGTCTTCTTGTT-TGGGTAAAAATTCACATCAATAATGTTATTTAAATTTGTAACCAA 155518
|| |||| | ||| || |||| | ||| || || || || || ||| | || |
Sbjct 5178725 CTCAGCTTCGGGCACTGGATAGTAATTAATATCTATGATCTTGTTCAAGTTTTTGACAAC 5178784
Query 155519 TACCTTGGTTACGTCTGCTAATTTCACATAGTCAAATGTTTTATCCTCATTTACAAACAT 155578
||||||||| || | |||| ||| | ||||||| || || | | || ||||
Sbjct 5178785 TACCTTGGTCACAGCAGCTAGTTTTTGAAAGTCAAAAGTCCGCTCAGCGGTGACGTACAT 5178844
Query 155579 ACCAAGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTAC 155638
|| | | || ||||||||||| ||||| ||| | | | | ||||||| ||
Sbjct 5178845 GTTGAGTGCGACGGAGGCCAGATTACAAACCGCTACCTCGTCGCTGCTGGTGTATTCCAC 5178904
Query 155639 AATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACT 155698
||| || ||| || || |||||||||||||| | ||||| |||||| || ||
Sbjct 5178905 AATTTCTGTGCATAGATTGCTGCTCTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCT 5178964
Query 155699 GTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAAT 155758
|| || ||||| ||||| || |||||||| || || || || |||| | || | ||
Sbjct 5178965 ATTGCAGGCATCTTTGTAGAGCATGTATGGAGTGCCGGTTTCAGTCTGGGACTCTATGAT 5179024
Query 155759 CTTTAGCCAGAGGTCACGGGCATT---AATTTGCTTGTTGTATCTGCCTTCCGACTCATA 155815
|||| | | |||| || | ||||| | | |||||| ||| ||
Sbjct 5179025 GGCATGCCAAACCTGCTGGGCCTTCACCACACGCTTGACG---CGGCCTTCTTTCTCGTA 5179081
Query 155816 TTTCATATACAGCGTTCGGTAA-TCCTCACCGTAACAATCACTCAGTCCAGGGCACTTAT 155874
||| | || ||| ||| || ||||| || | || ||| |||| || || || | |
Sbjct 5179082 TTTGGTGTAGAGC-TTCTCAAACTCCTCCCCCCAGCACTCATTCAGCCCGGGACATTCGT 5179140
Query 155875 CGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCG 155934
| || || | || ||||| | |||| || | || ||| || | |||
Sbjct 5179141 CTGGACACATTAGAGACCAGTCCTGGTTACTCTCCACCCTCTTCATGAACAAGTCAGGGA 5179200
Query 155935 CCCAAATAGCATAGAAAAGGTCCCTTGC-CTTTGACTCCTCATCGCC-GTGATTCTTCCG 155992
||| ||| | ||||||||||| || || || || |||||| | || ||| ||||||
Sbjct 5179201 TCCACATACCGTAGAAAAGGTCTCTGGCTCTCTG-CTCCTCTTTTCCAGTG-TTCTTCTT 5179258
Query 155993 TAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACC 156052
| ||| | ||| || ||||| | ||| || ||||| ||||| || ||| ||
Sbjct 5179259 CAACTCCAGGAAGTCAAATATATCGGAATGCCAGGGTTCCAGGTACATGGCGAAAGCCCC 5179318
Query 156053 ATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCAT 156109
| ||||||| |||||||| || ||||| || || || || ||| | || | |||||
Sbjct 5179319 AGGCCTCTTGTTTCCACCCTGGTCCACATAGCGTGCGGTGTTGTTGTAAACTCTCAGCAT 5179378
Query 156110 AGGAATAATACCATTGGAAGTGCCATTGGTTCC-GCGA 156146
|| | || |||||||| |||||||||| || ||||
Sbjct 5179379 GGGGACAAGCCCATTGGAGTTGCCATTGGTGCCAGCGA 5179416
>seq8
Length=14690302
Score = 86.0 bits (94), Expect = 2e-11
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 302607 ACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATG 302666
|||||| || ||| ||||| |||||||| || ||||| | | || |||||||| ||
Sbjct 13053044 ACCAGTCTCAGCTGTCTTTACGGCTGTATCGATCAGACCCTCTCTTCCTCCCATAGCGTG 13052985
Query 302667 GAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGC 302726
|||||| | |||| ||| || || | | | | ||| |||| || || || |
Sbjct 13052984 GAAGAAGAACTCTGTAGGTGTCAGGCCGGCCAGATACGAGTTCTCCACAAAGCCTCTGCT 13052925
Query 302727 CTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGG 302786
|||||| | ||| ||| | || |||||||| || | || | ||||| | ||
Sbjct 13052924 CTCGGGACCGTAGTCATCTTTGATGAAATGTGGCAGCGTGCGGTGTTTGAAGCCGAAGGG 13052865
Query 302787 GATACGCTTTCCATCAACGTTCTGCTGTCCCA 302818
||| || || || || ||||||||||||||||
Sbjct 13052864 GATTCGTTTACCCTCCACGTTCTGCTGTCCCA 13052833
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471688707873395
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |