Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq11 140 1e-27 seq8 86.0 2e-11 >seq11 Length=11238946 Score = 140 bits (154), Expect = 1e-27 Identities = 494/758 (65%), Gaps = 18/758 (2%) Strand=Plus/Plus Query 155400 AATGTGTCGGCTAAACCCTGAACTCCAATACCGACTGGGCGATGCCTGTAATTGCTCCTG 155459 |||| |||||| |||||||| || || || || | ||| | || | | ||| | | Sbjct 5178666 AATGCGTCGGCCAAACCCTGGACACCGATTCCTATTGGCCTGTGGCGCTTGTTGGACTT- 5178724 Query 155460 CTTGTCTTCTTGTT-TGGGTAAAAATTCACATCAATAATGTTATTTAAATTTGTAACCAA 155518 || |||| | ||| || |||| | ||| || || || || || ||| | || | Sbjct 5178725 CTCAGCTTCGGGCACTGGATAGTAATTAATATCTATGATCTTGTTCAAGTTTTTGACAAC 5178784 Query 155519 TACCTTGGTTACGTCTGCTAATTTCACATAGTCAAATGTTTTATCCTCATTTACAAACAT 155578 ||||||||| || | |||| ||| | ||||||| || || | | || |||| Sbjct 5178785 TACCTTGGTCACAGCAGCTAGTTTTTGAAAGTCAAAAGTCCGCTCAGCGGTGACGTACAT 5178844 Query 155579 ACCAAGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTAC 155638 || | | || ||||||||||| ||||| ||| | | | | ||||||| || Sbjct 5178845 GTTGAGTGCGACGGAGGCCAGATTACAAACCGCTACCTCGTCGCTGCTGGTGTATTCCAC 5178904 Query 155639 AATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACT 155698 ||| || ||| || || |||||||||||||| | ||||| |||||| || || Sbjct 5178905 AATTTCTGTGCATAGATTGCTGCTCTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCT 5178964 Query 155699 GTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAAT 155758 || || ||||| ||||| || |||||||| || || || || |||| | || | || Sbjct 5178965 ATTGCAGGCATCTTTGTAGAGCATGTATGGAGTGCCGGTTTCAGTCTGGGACTCTATGAT 5179024 Query 155759 CTTTAGCCAGAGGTCACGGGCATT---AATTTGCTTGTTGTATCTGCCTTCCGACTCATA 155815 |||| | | |||| || | ||||| | | |||||| ||| || Sbjct 5179025 GGCATGCCAAACCTGCTGGGCCTTCACCACACGCTTGACG---CGGCCTTCTTTCTCGTA 5179081 Query 155816 TTTCATATACAGCGTTCGGTAA-TCCTCACCGTAACAATCACTCAGTCCAGGGCACTTAT 155874 ||| | || ||| ||| || ||||| || | || ||| |||| || || || | | Sbjct 5179082 TTTGGTGTAGAGC-TTCTCAAACTCCTCCCCCCAGCACTCATTCAGCCCGGGACATTCGT 5179140 Query 155875 CGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCG 155934 | || || | || ||||| | |||| || | || ||| || | ||| Sbjct 5179141 CTGGACACATTAGAGACCAGTCCTGGTTACTCTCCACCCTCTTCATGAACAAGTCAGGGA 5179200 Query 155935 CCCAAATAGCATAGAAAAGGTCCCTTGC-CTTTGACTCCTCATCGCC-GTGATTCTTCCG 155992 ||| ||| | ||||||||||| || || || || |||||| | || ||| |||||| Sbjct 5179201 TCCACATACCGTAGAAAAGGTCTCTGGCTCTCTG-CTCCTCTTTTCCAGTG-TTCTTCTT 5179258 Query 155993 TAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACC 156052 | ||| | ||| || ||||| | ||| || ||||| ||||| || ||| || Sbjct 5179259 CAACTCCAGGAAGTCAAATATATCGGAATGCCAGGGTTCCAGGTACATGGCGAAAGCCCC 5179318 Query 156053 ATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCAT 156109 | ||||||| |||||||| || ||||| || || || || ||| | || | ||||| Sbjct 5179319 AGGCCTCTTGTTTCCACCCTGGTCCACATAGCGTGCGGTGTTGTTGTAAACTCTCAGCAT 5179378 Query 156110 AGGAATAATACCATTGGAAGTGCCATTGGTTCC-GCGA 156146 || | || |||||||| |||||||||| || |||| Sbjct 5179379 GGGGACAAGCCCATTGGAGTTGCCATTGGTGCCAGCGA 5179416 >seq8 Length=14690302 Score = 86.0 bits (94), Expect = 2e-11 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 302607 ACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATG 302666 |||||| || ||| ||||| |||||||| || ||||| | | || |||||||| || Sbjct 13053044 ACCAGTCTCAGCTGTCTTTACGGCTGTATCGATCAGACCCTCTCTTCCTCCCATAGCGTG 13052985 Query 302667 GAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGC 302726 |||||| | |||| ||| || || | | | | ||| |||| || || || | Sbjct 13052984 GAAGAAGAACTCTGTAGGTGTCAGGCCGGCCAGATACGAGTTCTCCACAAAGCCTCTGCT 13052925 Query 302727 CTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGG 302786 |||||| | ||| ||| | || |||||||| || | || | ||||| | || Sbjct 13052924 CTCGGGACCGTAGTCATCTTTGATGAAATGTGGCAGCGTGCGGTGTTTGAAGCCGAAGGG 13052865 Query 302787 GATACGCTTTCCATCAACGTTCTGCTGTCCCA 302818 ||| || || || || |||||||||||||||| Sbjct 13052864 GATTCGTTTACCCTCCACGTTCTGCTGTCCCA 13052833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471688707873395