Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq11 163 3e-35
seq15 105 6e-18
>seq11
Length=11238946
Score = 163 bits (180), Expect = 3e-35
Identities = 470/718 (65%), Gaps = 24/718 (3%)
Strand=Plus/Plus
Query 138540 GTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGT 138599
||| |||||| ||||| | | || | || |||||||| ||||| ||||| || || |
Sbjct 5178326 GTAGATGTTGCTGGTGTAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGGGCGGTTGA 5178385
Query 138600 CGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTG---ATTCG 138656
||||| ||||| || | | ||| |||| | ||||| |||| |||
Sbjct 5178386 GGCGGTGGGCATCGGGGCTAAGAGCAGACTGTTCCTCACGCCGTG---CTTGGCGATTTT 5178442
Query 138657 TTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTG 138716
|||||| ||| | ||||||| ||| ||| | || | || | |||||| ||||||||
Sbjct 5178443 TTCCTTTAGCAGCTTCCAGTCCAACAGGTCGGTGGGCGTCTTCTCCCACATGTCGTACTG 5178502
Query 138717 TAACATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTATACACCAAACTCTTGCGC 138776
| || ||| || | || ||||||||| | |||||| || | ||| ||
Sbjct 5178503 AAGGATGCCCTTGCTGACCGGGGAGCCTTCGTAGGTTTCGTATGGCCCGAGCTCGGCAGC 5178562
Query 138777 CAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAG 138836
|| |||| |||||||||||| || | ||||| || || ||| ||||| || ||
Sbjct 5178563 CAGCTCGCAGCTCGCCTCGAGGGCTGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAG 5178622
Query 138837 CAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCC 138896
| | || |||| ||| ||| |||| || | | |||| |||||||||| ||
Sbjct 5178623 AAGCTGAGCTTCGGGGCTTTCGAACGGGTAACGCATGAGGATGAATGCGTCGGCCAAACC 5178682
Query 138897 TTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCGGCTTCG---AT 138953
|| || || | ||| | || | |||||| || ||| || | |||||| |
Sbjct 5178683 CTGGACACCGATTCCTATTGGCCTGTGGCGCTTGTTGGAC---TTCTCAGCTTCGGGCAC 5178739
Query 138954 AGGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTATG 139013
||||| || || | ||| ||||| ||||| || ||| || || ||||| ||| |
Sbjct 5178740 TGGATAGTAATTAATATCTATGATCTTGTTCAAGTTTTTGACAACTACCTTGGTCACAGC 5178799
Query 139014 CTTTAATCGTTCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTT 139073
|| | || ||| || | || ||| || || ||||| ||| ||||
Sbjct 5178800 AGCTAGTTTTTGAAAGTCAAAAGT----CCG--CTCAGCGGTGACGT--ACA----TGTT 5178847
Query 139074 GACACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAAT 139133
|| | ||||| | || || ||||| || |||||| | | ||||||| |||||
Sbjct 5178848 GAGTGCGACGGAGGCCAGATTACAAACCGCTACCTCGTCGCTGCTGGTGTATTCCACAAT 5178907
Query 139134 TTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTT 139193
||| | || | ||| || | |||||| || || | ||| || || ||||| || | ||
Sbjct 5178908 TTCTGTGCATAGATTGCTGCTCTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTATT 5178967
Query 139194 ACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATG 139251
|| ||||||||||| ||||| || || ||||| ||||| || | |||||| |||
Sbjct 5178968 GCAGGCATCTTTGTAGAGCATGTATGGAGTGCCGGTTTCAGTCTGGGACTCTATGATG 5179025
>seq15
Length=11516971
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | ||||| || || || || || || || || || || || ||| |
Sbjct 2477200 ATGCAGATCTTTGTAAAAACCCTGACTGGCAAGACCATCACTCTTGAGGTGGAGCCCAGC 2477141
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| ||||| || || || |||||
Sbjct 2477140 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAG 2477081
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||| || || |||||||| ||| | | | | || || || |||
Sbjct 2477080 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAAC 2477021
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || || || ||| | || |||| || | || |||
Sbjct 2477020 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGGGGC 2476973
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | ||||| || || || || || || || || || || || ||| |
Sbjct 2477428 ATGCAGATCTTTGTAAAAACCCTGACTGGCAAGACCATCACTCTTGAGGTGGAGCCCAGC 2477369
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| ||||| || || || |||||
Sbjct 2477368 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAG 2477309
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||| || || |||||||| ||| | | | | || || || |||
Sbjct 2477308 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAAC 2477249
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || || || ||| | || |||| || | || |||
Sbjct 2477248 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGGGGC 2477201
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | ||||| || || || || || || || || || || || ||| |
Sbjct 2476972 ATGCAGATCTTTGTAAAAACCCTGACTGGCAAGACCATCACTCTTGAGGTGGAGCCCAGC 2476913
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| ||||| || || || |||||
Sbjct 2476912 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAG 2476853
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||| || || |||||||| ||| | | | | || || || |||
Sbjct 2476852 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAAC 2476793
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
|| || ||||| || || || ||| | || ||||
Sbjct 2476792 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCG 2476758
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | ||||| || || || || || || || || || || || |||
Sbjct 2477656 ATGCAGATCTTTGTAAAAACCCTGACTGGCAAGACCATCACTCTTGAGGTGGAGCCCAGT 2477597
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| ||||| || || || |||||
Sbjct 2477596 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAG 2477537
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||| || || |||||||| ||| | | | | || || || |||
Sbjct 2477536 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAAC 2477477
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || || || ||| | || |||| || | || |||
Sbjct 2477476 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGGGGC 2477429
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449859161873800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |