Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq11 163 3e-35 seq15 105 6e-18 >seq11 Length=11238946 Score = 163 bits (180), Expect = 3e-35 Identities = 470/718 (65%), Gaps = 24/718 (3%) Strand=Plus/Plus Query 138540 GTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGT 138599 ||| |||||| ||||| | | || | || |||||||| ||||| ||||| || || | Sbjct 5178326 GTAGATGTTGCTGGTGTAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGGGCGGTTGA 5178385 Query 138600 CGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTG---ATTCG 138656 ||||| ||||| || | | ||| |||| | ||||| |||| ||| Sbjct 5178386 GGCGGTGGGCATCGGGGCTAAGAGCAGACTGTTCCTCACGCCGTG---CTTGGCGATTTT 5178442 Query 138657 TTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTG 138716 |||||| ||| | ||||||| ||| ||| | || | || | |||||| |||||||| Sbjct 5178443 TTCCTTTAGCAGCTTCCAGTCCAACAGGTCGGTGGGCGTCTTCTCCCACATGTCGTACTG 5178502 Query 138717 TAACATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTATACACCAAACTCTTGCGC 138776 | || ||| || | || ||||||||| | |||||| || | ||| || Sbjct 5178503 AAGGATGCCCTTGCTGACCGGGGAGCCTTCGTAGGTTTCGTATGGCCCGAGCTCGGCAGC 5178562 Query 138777 CAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAG 138836 || |||| |||||||||||| || | ||||| || || ||| ||||| || || Sbjct 5178563 CAGCTCGCAGCTCGCCTCGAGGGCTGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAG 5178622 Query 138837 CAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCC 138896 | | || |||| ||| ||| |||| || | | |||| |||||||||| || Sbjct 5178623 AAGCTGAGCTTCGGGGCTTTCGAACGGGTAACGCATGAGGATGAATGCGTCGGCCAAACC 5178682 Query 138897 TTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCGGCTTCG---AT 138953 || || || | ||| | || | |||||| || ||| || | |||||| | Sbjct 5178683 CTGGACACCGATTCCTATTGGCCTGTGGCGCTTGTTGGAC---TTCTCAGCTTCGGGCAC 5178739 Query 138954 AGGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTATG 139013 ||||| || || | ||| ||||| ||||| || ||| || || ||||| ||| | Sbjct 5178740 TGGATAGTAATTAATATCTATGATCTTGTTCAAGTTTTTGACAACTACCTTGGTCACAGC 5178799 Query 139014 CTTTAATCGTTCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTT 139073 || | || ||| || | || ||| || || ||||| ||| |||| Sbjct 5178800 AGCTAGTTTTTGAAAGTCAAAAGT----CCG--CTCAGCGGTGACGT--ACA----TGTT 5178847 Query 139074 GACACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAAT 139133 || | ||||| | || || ||||| || |||||| | | ||||||| ||||| Sbjct 5178848 GAGTGCGACGGAGGCCAGATTACAAACCGCTACCTCGTCGCTGCTGGTGTATTCCACAAT 5178907 Query 139134 TTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTT 139193 ||| | || | ||| || | |||||| || || | ||| || || ||||| || | || Sbjct 5178908 TTCTGTGCATAGATTGCTGCTCTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTATT 5178967 Query 139194 ACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATG 139251 || ||||||||||| ||||| || || ||||| ||||| || | |||||| ||| Sbjct 5178968 GCAGGCATCTTTGTAGAGCATGTATGGAGTGCCGGTTTCAGTCTGGGACTCTATGATG 5179025 >seq15 Length=11516971 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | ||||| || || || || || || || || || || || ||| | Sbjct 2477200 ATGCAGATCTTTGTAAAAACCCTGACTGGCAAGACCATCACTCTTGAGGTGGAGCCCAGC 2477141 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| ||||| || || || ||||| Sbjct 2477140 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAG 2477081 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||| || || |||||||| ||| | | | | || || || ||| Sbjct 2477080 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAAC 2477021 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| || || || ||| | || |||| || | || ||| Sbjct 2477020 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGGGGC 2476973 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | ||||| || || || || || || || || || || || ||| | Sbjct 2477428 ATGCAGATCTTTGTAAAAACCCTGACTGGCAAGACCATCACTCTTGAGGTGGAGCCCAGC 2477369 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| ||||| || || || ||||| Sbjct 2477368 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAG 2477309 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||| || || |||||||| ||| | | | | || || || ||| Sbjct 2477308 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAAC 2477249 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| || || || ||| | || |||| || | || ||| Sbjct 2477248 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGGGGC 2477201 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | ||||| || || || || || || || || || || || ||| | Sbjct 2476972 ATGCAGATCTTTGTAAAAACCCTGACTGGCAAGACCATCACTCTTGAGGTGGAGCCCAGC 2476913 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| ||||| || || || ||||| Sbjct 2476912 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAG 2476853 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||| || || |||||||| ||| | | | | || || || ||| Sbjct 2476852 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAAC 2476793 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || ||||| || || || ||| | || |||| Sbjct 2476792 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCG 2476758 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | ||||| || || || || || || || || || || || ||| Sbjct 2477656 ATGCAGATCTTTGTAAAAACCCTGACTGGCAAGACCATCACTCTTGAGGTGGAGCCCAGT 2477597 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| ||||| || || || ||||| Sbjct 2477596 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAG 2477537 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||| || || |||||||| ||| | | | | || || || ||| Sbjct 2477536 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAAC 2477477 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| || || || ||| | || |||| || | || ||| Sbjct 2477476 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGGGGC 2477429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449859161873800