Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq11 178 1e-39
seq15 138 1e-27
seq6 91.5 1e-13
>seq11
Length=11238946
Score = 178 bits (196), Expect = 1e-39
Identities = 833/1300 (64%), Gaps = 36/1300 (3%)
Strand=Plus/Plus
Query 148237 TCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCA 148296
||||||| | || || | | || || | ||| ||||| |||| || || | ||
Sbjct 5178265 TCAGGTCTTTGAGGAGGTGAGGGTTGACAATCTGGAACTCCCCGGACAGGACCCTGCGGG 5178324
Query 148297 GATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCG 148356
|| | |||||| || | | ||| | |||||||||||||||| ||||| ||||| |
Sbjct 5178325 TGTAGATGTTGCTGGTGTAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGGGCGGTTG 5178384
Query 148357 TTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGC 148416
|| |||||||| |||| ||||| ||| | || ||| | || |||||
Sbjct 5178385 AGGCGGTGGGCATCGGGGCTAAGAGCAGACTGTTCCTCACGCCGTGCTTGGCGATTTTTT 5178444
Query 148417 GCTTCAGAGCCGCCCAGTCCCAGAG--CGGCGACGGTGTCACGTTCCACATGTCGTACTG 148474
||| || | ||||||| | || ||| | || ||| | |||||||||||||||
Sbjct 5178445 CCTTTAGCAGCTTCCAGTCCAACAGGTCGGTG--GGCGTCTTCTCCCACATGTCGTACTG 5178502
Query 148475 CAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGC 148534
|| ||||| ||| | ||| ||| ||||| | ||| || ||| || | || ||
Sbjct 5178503 AAGGATGCCCTTGCTGACCGGGGAGCCTTCGTAGGTTTCGTATGGCCCGAGCTCGGCAGC 5178562
Query 148535 CAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAG 148594
||| ||||||||||||||||| || ||||||| || |||||| || || |||| ||
Sbjct 5178563 CAGCTCGCAGCTCGCCTCGAGGGCTGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAG 5178622
Query 148595 CAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCC 148654
||| || ||||||| |||| ||||| | | || |||||||| | ||
Sbjct 5178623 AAGCTGAGCTTCGGGGCTTTCGAACGGGTAACGCATGAGGATGAATGCGTCGGCCAAACC 5178682
Query 148655 CTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC-- 148712
||| || || | || || |||| ||| ||||||| | | ||| ||| ||
Sbjct 5178683 CTGGACACCGATTCCTATTGGCCTGTGGCGCTTGTTGGA-CTTCTC-AGCT-TCGGGCAC 5178739
Query 148713 -GGATAGTGGTTGCGGTCGATGATCTTG-TCAAGATTGCGCACCACCACCTTTGTAATTC 148770
||||||| || || ||||||||| ||||| || | || || ||||| || | |
Sbjct 5178740 TGGATAGTAATTAATATCTATGATCTTGTTCAAGTTTTTG-ACAACTACCTTGGTCA--C 5178796
Query 148771 TGC-GC-AGCAATTCAAAATCGTA---CTTGTCATCTACGATGCATCGGTTCACGGCGAT 148825
|| || || || ||| || | | ||| | || | | ||| | ||||
Sbjct 5178797 AGCAGCTAGTTTTTGAAAGTCAAAAGTCCGCTCAGCGGTGACGTACATGTTGAGTGCGAC 5178856
Query 148826 AGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCA 148885
||||| ||||| || || || ||| || | | |||| || || || || | |||
Sbjct 5178857 GGAGGCCAGATTACAAACCGCTACCTCGTCGCTGCTGGTGTATTCCACAATTTCTGTGCA 5178916
Query 148886 CAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTC 148945
|||||||||| ||||| ||||| |||| || |||||||| || ||||| || ||
Sbjct 5178917 TAGATTGCTGCTCTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTATTGCAGGCATC 5178976
Query 148946 CTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAACCGATGC-- 149003
||||| |||||||| || ||| ||||| ||| | | |||||| ||||
Sbjct 5178977 TTTGTAGAGCATGTATGGAGTGCCGGTTTCAGTCTGGG---ACTCTATGATGGCATGCCA 5179033
Query 149004 -AGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATACAG 149062
| | ||| || ||| ||| | ||| || || | ||||||| || || ||
Sbjct 5179034 AACCTGCTGGGCCTTCACCACACGCTTGACGCGGCCTTCTTTCTCGTATTTGGTGTAGAG 5179093
Query 149063 CCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAG 149122
| ||| ||| |||| || |||| || | || ||||| || | || || ||||| ||
Sbjct 5179094 CTTCTCAAACTCCTCCCCCCAGCACTCATTCAGCCCGGGACATTCGTCTGGACACATTAG 5179153
Query 149123 CGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTA 149182
||||| | || | ||| | |||||| |||| || || | ||| | ||||
Sbjct 5179154 AGACCAGTCCTGGTTACTCTCCACCCTCTTCATGAACAAGTCAGGGATCCACATACCGTA 5179213
Query 149183 CATGAGGTCGC--GCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACG 149240
| ||||| | || | ||| || || || |||| || | || | |
Sbjct 5179214 GAAAAGGTCTCTGGCTCTCTGC--TCCTCTTTTCCAGTGTTCTTCTTCAACTCCAGGAAG 5179271
Query 149241 CTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTG--- 149297
||||| || | ||||| || || | ||||| |||| || || | ||||
Sbjct 5179272 TCAAATATATCGGAATGCCAGGGTTCCAGGTACATGGCGAAAGCCCCAGGCCTCTTGTTT 5179331
Query 149298 CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCA 149357
|| |||||||| || | ||| | ||||||| | |||| | ||| || ||| |||
Sbjct 5179332 CCACCCTGGTCCACATAGCGTGCGGTGTTGTTGTAAACTCTCAGCATGGGGACAAGCCCA 5179391
Query 149358 CTGGCAGTGCCGTTAGT-AGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTT 149416
||| |||| || || ||| ||| ||| || | || | | |||
Sbjct 5179392 TTGGAGTTGCCATTGGTGCCAGC-GATGTAACTTCCCGTAGATCTGATGCAGCTGACGGC 5179450
Query 149417 GACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGA 149475
|| ||||| || || |||| |||| |||||| |||||| | ||||| || |
Sbjct 5179451 CACACCGATTCCTCCAGCCG-ACTTGGAGATGAGCGCGCACTGTTTCAGCGTGTCATAAA 5179509
Query 149476 TGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCA 149515
|||||||||||||||| |||||||| ||||| |||||
Sbjct 5179510 TGCCCTCGATGCTGTCATCCTTCATGGCGAGCAGGAAGCA 5179549
>seq15
Length=11516971
Score = 138 bits (152), Expect = 1e-27
Identities = 152/200 (76%), Gaps = 2/200 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||| ||||| || ||||| ||| | ||| | | | || || ||||||||||
Sbjct 2476775 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA-TCTTCCAGCTGCTTGC 2476833
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | || |||| |||||| || || || |||||||||||||| |||||| ||
Sbjct 2476834 CAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCT 2476893
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||||| |||||| |||||||||| || | |||| ||| ||||| ||||| |
Sbjct 2476894 TCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGG 2476953
Query 133642 TTTTTACGAAAATCTGCATG 133661
||||||| || |||||||||
Sbjct 2476954 TTTTTACAAAGATCTGCATG 2476973
Score = 138 bits (152), Expect = 1e-27
Identities = 152/200 (76%), Gaps = 2/200 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||| ||||| || ||||| ||| | ||| | | | || || ||||||||||
Sbjct 2477003 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA-TCTTCCAGCTGCTTGC 2477061
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | || |||| |||||| || || || |||||||||||||| |||||| ||
Sbjct 2477062 CAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCT 2477121
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||||| |||||| |||||||||| || | |||| ||| ||||| ||||| |
Sbjct 2477122 TCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGG 2477181
Query 133642 TTTTTACGAAAATCTGCATG 133661
||||||| || |||||||||
Sbjct 2477182 TTTTTACAAAGATCTGCATG 2477201
Score = 138 bits (152), Expect = 1e-27
Identities = 152/200 (76%), Gaps = 2/200 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||| ||||| || ||||| ||| | ||| | | | || || ||||||||||
Sbjct 2477231 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA-TCTTCCAGCTGCTTGC 2477289
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | || |||| |||||| || || || |||||||||||||| |||||| ||
Sbjct 2477290 CAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCT 2477349
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||||| |||||| |||||||||| || | |||| ||| ||||| ||||| |
Sbjct 2477350 TCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGG 2477409
Query 133642 TTTTTACGAAAATCTGCATG 133661
||||||| || |||||||||
Sbjct 2477410 TTTTTACAAAGATCTGCATG 2477429
Score = 132 bits (146), Expect = 5e-26
Identities = 151/200 (76%), Gaps = 2/200 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||| ||||| || ||||| ||| | ||| | | | || || ||||||||||
Sbjct 2477459 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA-TCTTCCAGCTGCTTGC 2477517
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | || |||| |||||| || || || |||||||||||||| |||||| ||
Sbjct 2477518 CAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCT 2477577
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||||| ||||| |||||||||| || | |||| ||| ||||| ||||| |
Sbjct 2477578 TCACATTCTCAATGGTGTCACTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGG 2477637
Query 133642 TTTTTACGAAAATCTGCATG 133661
||||||| || |||||||||
Sbjct 2477638 TTTTTACAAAGATCTGCATG 2477657
Score = 122 bits (134), Expect = 8e-23
Identities = 94/112 (84%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 148864 TGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGAT 148923
|||||||||| ||||| | ||||||||||||| ||||||| ||||| ||||| || |
Sbjct 9312830 TGTACTCTACAATCTCTGTGCACAGATTGCTGGATTTGATGGTGCCCAGGTTCTGCTGGT 9312889
Query 148924 TGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTC 148975
||||||| |||||||| ||||||||||| |||||||| ||| ||| |||||
Sbjct 9312890 TGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTATGGTGTGCCGGTTTC 9312941
>seq6
Length=9412079
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
|||| |||| ||||| || ||||| || | ||| ||||| |||||||||||
Sbjct 6657383 GGTGAACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGTGGCCGTCCTGCAGCTGCTTGCC 6657324
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | ||||| |||||||| || |||||||| || ||||| || |||||| |||
Sbjct 6657323 AGCAAAGATGAGACGCTGCTGATCAGGAGGGATCCCCTCCTTATCATGGATCTTGACCTT 6657264
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | | ||| |||| |||| ||||| | | ||| ||| ||| | ||||| ||
Sbjct 6657263 GATATTCACAATGCTGTCATTGGGTTCCACATTCAGACTGATGGTCTTGTCAGTCAGGGT 6657204
Query 133643 TTTTACGAAAATCTGCAT 133660
|| || || ||||||||
Sbjct 6657203 CTTCACAAATATCTGCAT 6657186
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483379497735400
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