Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_024696.1 Length=180800 Score E Sequences producing significant alignments: (Bits) Value seq9 179 4e-40 >seq9 Length=13922460 Score = 179 bits (198), Expect = 4e-40 Identities = 570/869 (66%), Gaps = 16/869 (2%) Strand=Plus/Plus Query 162120 ATCGAACTTGTTCGCGAACAGGTGATGCGAGTTCTTCAATATCCAATTAAGATCCCCCGA 162179 |||||||||||| ||||| || || | | || | | | ||| | | ||||| Sbjct 8683644 ATCGAACTTGTTTGCGAATAGTTGTTTCT-GTGCG--AGGAGCCACTGGATGTCCCCTAC 8683700 Query 162180 TCCGAACACGCACACGGACCGCACGTGCACGCCGCTGCACGGCGGATACAGGGCCCCATC 162239 |||| |||| ||||| | | | || | ||| |||| || | || ||||||| Sbjct 8683701 TCCGTACACACACACCGCTCTCCTGTAGTCCCCGGTGCAGGGTCGGTATGGGGCCCCCAG 8683760 Query 162240 GTCCACATCCCCCTCGTAGTATTGCCACTTAACGAACCTAGTGATAGCCTGCATGTCGGA 162299 |||||||| ||| | |||| |||||| || | | | | ||| ||||||| || Sbjct 8683761 TTCCACATCACCCGCCAAGTAGCTCCACTTGACCACGCGCGCCAGGGCCAGCATGTCCGA 8683820 Query 162300 GGTGTCGTACTTGTACACTGACGGCACGGCTCCAGGAACACCCGGCAGTCTCTGTAGAGT 162359 ||||||||||||| |||| | || || || |||| ||||| || || Sbjct 8683821 CGTGTCGTACTTGTTGTTGTGGGGCAATGACCCGGGGACTGTGGGCATCCTCTGCAGGGT 8683880 Query 162360 AGCCCACAGGTGTTCGTCTGGACTATACGTCTCCTTCGACCACTCCATGAACTCCCTGAC 162419 ||||||||||| ||||| ||||| || || |||||| |||||||| || |||| || Sbjct 8683881 GGCCCACAGGTGCTCGTCCGGACTGTAGGTGTCCTTCTCCCACTCCAGGAGCTCCTGCAC 8683940 Query 162420 CGTTTTATCGTATAGAATGTAAGAGACGTAGGACCTGGTCACAATAAAGTACGCGCTACC 162479 | || || | | || ||| | | || | ||| | ||||| || | || Sbjct 8683941 CTTTGCGTCTGTCATCACGTGTTGCACGAAAGTTCTCGACACCACGAAGTAGGCATTTCC 8684000 Query 162480 AGAAAACACGGGTATGCGTATAGGAGGGGGCTCTTTGTCTTGACCCGTGTTGACT-ACCA 162538 || |||| ||| | ||| || ||||| |||| ||| || |||| || | || Sbjct 8684001 GGAGAACATGGGCGTTTTTATGGGCGGGGGG-CTTT-TCTCCACGTCTGTT--CTGATCA 8684056 Query 162539 TTCCCTCTACGACCACGTGTCTCTTCCTCCACCTGGCCATCTTACTGGTAGACGGGTGT- 162597 | || |||| ||| | | ||||| |||| | || | | | || || Sbjct 8684057 CCTCATCCGTGACCTGGTGGTGGTACAGCCACC-GGCCCTTTTTGTTCTCGTTGGTGGTC 8684115 Query 162598 TCGGTCTCTAGACTGTTACGACCCCCCAAGGCCTTCAGCTGACGCACCATCTCTAGATTG 162657 |||| ||| | ||||| | ||| || || ||||||| |||||||||| ||| Sbjct 8684116 TCGGACTCCATGCTGTTCCTGCCCTTCAGGGTCTTCAGCGTCTGCACCATCTCCCTGTTG 8684175 Query 162658 GTCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTCCACTTAACGCTG-AG 162716 || || | ||| ||||||| ||||| || | | || ||||| ||||| || || Sbjct 8684176 GTTTTGATGGGGAAGTCGGCCCCGCATGTGTTCAGCATGTACTTCCATTTAACCTTGGAG 8684235 Query 162717 TCCGTACAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACGCGTACAC 162776 ||| |||||| | ||||||| || ||||| ||||| ||||||||||||||| Sbjct 8684236 TCCAG-CAGATCTCTCATGCAGTTCAAGTCCGCCTGTACGCGGGACCACGACGCGTACAC 8684294 Query 162777 GACGCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACACGAAACTATCCCCATCAC 162836 ||||| || || | ||||| | || || || || || |||| ||||||| || Sbjct 8684295 CACGCTTTCTAATTTGGTGGCCAGGAACACGTTAGGGAGGCAGGAAATAATCCCCACGAC 8684354 Query 162837 GGCCAGTGAGAA--CATCGGGTCCGCTTTCCTATCTACGTGTACGCAGTATAGATTCTGA 162894 |||| ||| |||| | | |||| ||| || || |||||||| | |||||| Sbjct 8684355 GGCCGCCTTGAATTCATCC--TTGGATTTCTGATCCACATGAACGCAGTAGACGTTCTGA 8684412 Query 162895 GGGGCGTAGATGGCCCTCAGTAATCTCTCGAACATCTCTATCTTATGGTGTACCACGATA 162954 |||| ||||||||||| ||| | | |||||||||||| || || | || | ||| || Sbjct 8684413 GGGGTGTAGATGGCCCGCAGGAGCCGCTCGAACATCTCGATGTTGTCATGGATCACCATG 8684472 Query 162955 GAATACGCTATGGGGAACTCAGCCTCCTC 162983 || || || |||||||| || |||||| Sbjct 8684473 GAGTAAGCGATGGGGAAGTCTCTCTCCTC 8684501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578382580216000