Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_024696.1
Length=180800
Score E
Sequences producing significant alignments: (Bits) Value
seq9 179 4e-40
>seq9
Length=13922460
Score = 179 bits (198), Expect = 4e-40
Identities = 570/869 (66%), Gaps = 16/869 (2%)
Strand=Plus/Plus
Query 162120 ATCGAACTTGTTCGCGAACAGGTGATGCGAGTTCTTCAATATCCAATTAAGATCCCCCGA 162179
|||||||||||| ||||| || || | | || | | | ||| | | |||||
Sbjct 8683644 ATCGAACTTGTTTGCGAATAGTTGTTTCT-GTGCG--AGGAGCCACTGGATGTCCCCTAC 8683700
Query 162180 TCCGAACACGCACACGGACCGCACGTGCACGCCGCTGCACGGCGGATACAGGGCCCCATC 162239
|||| |||| ||||| | | | || | ||| |||| || | || |||||||
Sbjct 8683701 TCCGTACACACACACCGCTCTCCTGTAGTCCCCGGTGCAGGGTCGGTATGGGGCCCCCAG 8683760
Query 162240 GTCCACATCCCCCTCGTAGTATTGCCACTTAACGAACCTAGTGATAGCCTGCATGTCGGA 162299
|||||||| ||| | |||| |||||| || | | | | ||| ||||||| ||
Sbjct 8683761 TTCCACATCACCCGCCAAGTAGCTCCACTTGACCACGCGCGCCAGGGCCAGCATGTCCGA 8683820
Query 162300 GGTGTCGTACTTGTACACTGACGGCACGGCTCCAGGAACACCCGGCAGTCTCTGTAGAGT 162359
||||||||||||| |||| | || || || |||| ||||| || ||
Sbjct 8683821 CGTGTCGTACTTGTTGTTGTGGGGCAATGACCCGGGGACTGTGGGCATCCTCTGCAGGGT 8683880
Query 162360 AGCCCACAGGTGTTCGTCTGGACTATACGTCTCCTTCGACCACTCCATGAACTCCCTGAC 162419
||||||||||| ||||| ||||| || || |||||| |||||||| || |||| ||
Sbjct 8683881 GGCCCACAGGTGCTCGTCCGGACTGTAGGTGTCCTTCTCCCACTCCAGGAGCTCCTGCAC 8683940
Query 162420 CGTTTTATCGTATAGAATGTAAGAGACGTAGGACCTGGTCACAATAAAGTACGCGCTACC 162479
| || || | | || ||| | | || | ||| | ||||| || | ||
Sbjct 8683941 CTTTGCGTCTGTCATCACGTGTTGCACGAAAGTTCTCGACACCACGAAGTAGGCATTTCC 8684000
Query 162480 AGAAAACACGGGTATGCGTATAGGAGGGGGCTCTTTGTCTTGACCCGTGTTGACT-ACCA 162538
|| |||| ||| | ||| || ||||| |||| ||| || |||| || | ||
Sbjct 8684001 GGAGAACATGGGCGTTTTTATGGGCGGGGGG-CTTT-TCTCCACGTCTGTT--CTGATCA 8684056
Query 162539 TTCCCTCTACGACCACGTGTCTCTTCCTCCACCTGGCCATCTTACTGGTAGACGGGTGT- 162597
| || |||| ||| | | ||||| |||| | || | | | || ||
Sbjct 8684057 CCTCATCCGTGACCTGGTGGTGGTACAGCCACC-GGCCCTTTTTGTTCTCGTTGGTGGTC 8684115
Query 162598 TCGGTCTCTAGACTGTTACGACCCCCCAAGGCCTTCAGCTGACGCACCATCTCTAGATTG 162657
|||| ||| | ||||| | ||| || || ||||||| |||||||||| |||
Sbjct 8684116 TCGGACTCCATGCTGTTCCTGCCCTTCAGGGTCTTCAGCGTCTGCACCATCTCCCTGTTG 8684175
Query 162658 GTCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTCCACTTAACGCTG-AG 162716
|| || | ||| ||||||| ||||| || | | || ||||| ||||| || ||
Sbjct 8684176 GTTTTGATGGGGAAGTCGGCCCCGCATGTGTTCAGCATGTACTTCCATTTAACCTTGGAG 8684235
Query 162717 TCCGTACAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACGCGTACAC 162776
||| |||||| | ||||||| || ||||| ||||| |||||||||||||||
Sbjct 8684236 TCCAG-CAGATCTCTCATGCAGTTCAAGTCCGCCTGTACGCGGGACCACGACGCGTACAC 8684294
Query 162777 GACGCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACACGAAACTATCCCCATCAC 162836
||||| || || | ||||| | || || || || || |||| ||||||| ||
Sbjct 8684295 CACGCTTTCTAATTTGGTGGCCAGGAACACGTTAGGGAGGCAGGAAATAATCCCCACGAC 8684354
Query 162837 GGCCAGTGAGAA--CATCGGGTCCGCTTTCCTATCTACGTGTACGCAGTATAGATTCTGA 162894
|||| ||| |||| | | |||| ||| || || |||||||| | ||||||
Sbjct 8684355 GGCCGCCTTGAATTCATCC--TTGGATTTCTGATCCACATGAACGCAGTAGACGTTCTGA 8684412
Query 162895 GGGGCGTAGATGGCCCTCAGTAATCTCTCGAACATCTCTATCTTATGGTGTACCACGATA 162954
|||| ||||||||||| ||| | | |||||||||||| || || | || | ||| ||
Sbjct 8684413 GGGGTGTAGATGGCCCGCAGGAGCCGCTCGAACATCTCGATGTTGTCATGGATCACCATG 8684472
Query 162955 GAATACGCTATGGGGAACTCAGCCTCCTC 162983
|| || || |||||||| || ||||||
Sbjct 8684473 GAGTAAGCGATGGGGAAGTCTCTCTCCTC 8684501
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578382580216000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |