Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq11 154 1e-32
seq15 91.5 1e-13
>seq11
Length=11238946
Score = 154 bits (170), Expect = 1e-32
Identities = 708/1106 (64%), Gaps = 58/1106 (5%)
Strand=Plus/Plus
Query 146938 TTGCTAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTA 146997
||||| ||| | | || | |||||| || ||||| | || ||||| || | |||||
Sbjct 5178333 TTGCTGGTGTAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGGGCGGTTGAGGCGGTG 5178392
Query 146998 GGCATGTACGCCACCAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAA- 147056
||||| || | | || || | || |||| | ||| || ||||| |
Sbjct 5178393 GGCATCGGGGCTAAGAGCAGACTGTTCCTCACGCCGTGCTTGGCGATTTTTTCCTTTAGC 5178452
Query 147057 AGTTTGCCAGTCCCACA--TCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACT 147114
|| || ||||||| ||| ||| | ||||||| | ||||||||||||||| || |
Sbjct 5178453 AGCTT-CCAGTCCAACAGGTCG--GTGGGCGTCTTCTCCCACATGTCGTACTGAAGGATG 5178509
Query 147115 CCTCGACTGGCGGGACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGC-GCCAATTC 147173
|| ||| | || ||| || | || ||| ||| || | || |||| ||
Sbjct 5178510 CCCTTGCTGACCGGGGAGCCTTCGTAGGTTTCGTATGGCCCGA-GCTCGGCAGCCAGCTC 5178568
Query 147174 ACAGCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGT 147233
||||| |||||||| ||| | ||||| ||||| ||| ||| || |||| || |
Sbjct 5178569 GCAGCTCGCCTCGAGGGCTGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAGAAGCTG 5178628
Query 147234 CGCTTCTTCGCTCTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGAT 147293
||||| ||| ||| | || ||||| || | || || ||||||||||||||||
Sbjct 5178629 AGCTTCGGGGCTTTCGAACGGGTAACGCATGAGGATGAATGCGTCGGCCAAACCCTGGAC 5178688
Query 147294 ACCGACGCCGATAGGTC---GATGCTTTTCG--TTGCTGCGCTTCGCGCTCGCTATGGGA 147348
||||| || || || | | |||| | | | || |||||| || | |||
Sbjct 5178689 ACCGATTCCTATTGGCCTGTGGCGCTTGTTGGACTTCTCAGCTTCGGGC-----ACTGGA 5178743
Query 147349 TAGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTG 147408
|||| || ||| || |||||||| | ||| || || || || || | |
Sbjct 5178744 TAGTAATTAATATCTATGATCTTGTTCAAGTTTTTGACAACTACCTTGGTCACAGCAGCT 5178803
Query 147409 AGTTTCTCGAAATCATAAGTCCCGTCTTC-GACACGTACGCATTGGTTCACGGCGATAGA 147467
||||| | || ||| |||||| || | | ||||| ||| ||| | |||| ||
Sbjct 5178804 AGTTTTTGAAAGTCAAAAGTCCGCTCAGCGGTGACGTA--CAT--GTTGAGTGCGACGGA 5178859
Query 147468 CGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAG 147527
|||||||| || || || ||| ||| | | |||| | ||| ||||| | ||| ||
Sbjct 5178860 GGCCAGATTACAAACCGCTACCTCGTCGCTGCTGGTGTATTCCACAATTTCTGTGCATAG 5178919
Query 147528 GTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTT 147587
||||||| || ||| |||| ||| ||||| ||||| |||| |||||| || |||||
Sbjct 5178920 ATTGCTGCTCTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTATTGCAGGCATCTTT 5178979
Query 147588 GAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGAT--------AAACCTA 147639
| |||||||||| || |||||| || || | || | ||| |||||
Sbjct 5178980 GTAGAGCATGTATGGAGTGCCGGTTTCAGTCTGGGACTCTATGATGGCATGCCAAACC-- 5179037
Query 147640 TGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTAC 147699
||| || ||| | | ||| |||| || |||||| || || ||||| |||
Sbjct 5179038 TGCTGGGCCTTCAC---CACACGCT--TGA-CGCGGCCTTCTTTCTCGTATTTGGTGTAG 5179091
Query 147700 AACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATC 147759
| | ||||||||| || || |||| || || |||||||| | | ||||||||
Sbjct 5179092 AGCTTCTCAAACTCCTCCCCCCAGCACTCATTCAGCCCGGGACATTCGTCTGGACACATT 5179151
Query 147760 AGCGACCACATGTCGTCCGCGTTA------ACGCGTCGCATAAACAGATCCGGCACCCAC 147813
|| ||||| |||| |||| || | ||| |||| || || | ||||
Sbjct 5179152 AGAGACCA------GTCCTGGTTACTCTCCACCCTCTTCATGAACAAGTCAGGGATCCAC 5179205
Query 147814 AGCGCGTACATAAGATCGC--GCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAAT 147871
| |||| | ||| || | || || ||| ||||| || |||| ||||| |
Sbjct 5179206 ATACCGTAGAAAAGGTCTCTGGCTCTCTGC--TCCTCTTTTCCAGTGTTCTTCTTCAACT 5179263
Query 147872 TAAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTAC 147931
|| | | | | || |||| ||||||||||| | ||| | ||| | || || |
Sbjct 5179264 CCAGGAAGTCAAATATATCGGAATGCCAGGGTTCCAGGTACATGGCGAAAGCCCCAGGCC 5179323
Query 147932 GC---TTTCCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTT 147988
| ||||| |||||||| |||| ||| | ||||||| | || | || ||||||
Sbjct 5179324 TCTTGTTTCCACCCTGGTCCACATAGCGTGCGGTGTTGTTGTAAACTCTCAGCATGGGGA 5179383
Query 147989 CCAGGCCGCTCGCAGTGCCGTTGGTG 148014
| || || | | |||| ||||||
Sbjct 5179384 CAAGCCCATTGGAGTTGCCATTGGTG 5179409
>seq15
Length=11516971
Score = 91.5 bits (100), Expect = 1e-13
Identities = 137/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| || || |||||||||||| | ||| || |||||| ||||| || || | |
Sbjct 2476779 GACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCA 2476838
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| || | ||| ||||| || || |||||||| || || || || ||||
Sbjct 2476839 AAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACG 2476898
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | || ||| | |||||||| || | || | || || |||||||| ||||||
Sbjct 2476899 TTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTT 2476958
Query 132110 ATGAAAATCTGCATG 132124
| || |||||||||
Sbjct 2476959 ACAAAGATCTGCATG 2476973
Score = 91.5 bits (100), Expect = 1e-13
Identities = 137/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| || || |||||||||||| | ||| || |||||| ||||| || || | |
Sbjct 2477007 GACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCA 2477066
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| || | ||| ||||| || || |||||||| || || || || ||||
Sbjct 2477067 AAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACG 2477126
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | || ||| | |||||||| || | || | || || |||||||| ||||||
Sbjct 2477127 TTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTT 2477186
Query 132110 ATGAAAATCTGCATG 132124
| || |||||||||
Sbjct 2477187 ACAAAGATCTGCATG 2477201
Score = 91.5 bits (100), Expect = 1e-13
Identities = 137/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| || || |||||||||||| | ||| || |||||| ||||| || || | |
Sbjct 2477235 GACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCA 2477294
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| || | ||| ||||| || || |||||||| || || || || ||||
Sbjct 2477295 AAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACG 2477354
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | || ||| | |||||||| || | || | || || |||||||| ||||||
Sbjct 2477355 TTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTT 2477414
Query 132110 ATGAAAATCTGCATG 132124
| || |||||||||
Sbjct 2477415 ACAAAGATCTGCATG 2477429
Score = 86.0 bits (94), Expect = 6e-12
Identities = 136/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| || || |||||||||||| | ||| || |||||| ||||| || || | |
Sbjct 2477463 GACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCA 2477522
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| || | ||| ||||| || || |||||||| || || || || ||||
Sbjct 2477523 AAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACA 2477582
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | || || | |||||||| || | || | || || |||||||| ||||||
Sbjct 2477583 TTCTCAATGGTGTCACTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTT 2477642
Query 132110 ATGAAAATCTGCATG 132124
| || |||||||||
Sbjct 2477643 ACAAAGATCTGCATG 2477657
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476570479530600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |