Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq11 154 1e-32 seq15 91.5 1e-13 >seq11 Length=11238946 Score = 154 bits (170), Expect = 1e-32 Identities = 708/1106 (64%), Gaps = 58/1106 (5%) Strand=Plus/Plus Query 146938 TTGCTAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTA 146997 ||||| ||| | | || | |||||| || ||||| | || ||||| || | ||||| Sbjct 5178333 TTGCTGGTGTAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGGGCGGTTGAGGCGGTG 5178392 Query 146998 GGCATGTACGCCACCAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAA- 147056 ||||| || | | || || | || |||| | ||| || ||||| | Sbjct 5178393 GGCATCGGGGCTAAGAGCAGACTGTTCCTCACGCCGTGCTTGGCGATTTTTTCCTTTAGC 5178452 Query 147057 AGTTTGCCAGTCCCACA--TCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACT 147114 || || ||||||| ||| ||| | ||||||| | ||||||||||||||| || | Sbjct 5178453 AGCTT-CCAGTCCAACAGGTCG--GTGGGCGTCTTCTCCCACATGTCGTACTGAAGGATG 5178509 Query 147115 CCTCGACTGGCGGGACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGC-GCCAATTC 147173 || ||| | || ||| || | || ||| ||| || | || |||| || Sbjct 5178510 CCCTTGCTGACCGGGGAGCCTTCGTAGGTTTCGTATGGCCCGA-GCTCGGCAGCCAGCTC 5178568 Query 147174 ACAGCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGT 147233 ||||| |||||||| ||| | ||||| ||||| ||| ||| || |||| || | Sbjct 5178569 GCAGCTCGCCTCGAGGGCTGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAGAAGCTG 5178628 Query 147234 CGCTTCTTCGCTCTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGAT 147293 ||||| ||| ||| | || ||||| || | || || |||||||||||||||| Sbjct 5178629 AGCTTCGGGGCTTTCGAACGGGTAACGCATGAGGATGAATGCGTCGGCCAAACCCTGGAC 5178688 Query 147294 ACCGACGCCGATAGGTC---GATGCTTTTCG--TTGCTGCGCTTCGCGCTCGCTATGGGA 147348 ||||| || || || | | |||| | | | || |||||| || | ||| Sbjct 5178689 ACCGATTCCTATTGGCCTGTGGCGCTTGTTGGACTTCTCAGCTTCGGGC-----ACTGGA 5178743 Query 147349 TAGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTG 147408 |||| || ||| || |||||||| | ||| || || || || || | | Sbjct 5178744 TAGTAATTAATATCTATGATCTTGTTCAAGTTTTTGACAACTACCTTGGTCACAGCAGCT 5178803 Query 147409 AGTTTCTCGAAATCATAAGTCCCGTCTTC-GACACGTACGCATTGGTTCACGGCGATAGA 147467 ||||| | || ||| |||||| || | | ||||| ||| ||| | |||| || Sbjct 5178804 AGTTTTTGAAAGTCAAAAGTCCGCTCAGCGGTGACGTA--CAT--GTTGAGTGCGACGGA 5178859 Query 147468 CGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAG 147527 |||||||| || || || ||| ||| | | |||| | ||| ||||| | ||| || Sbjct 5178860 GGCCAGATTACAAACCGCTACCTCGTCGCTGCTGGTGTATTCCACAATTTCTGTGCATAG 5178919 Query 147528 GTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTT 147587 ||||||| || ||| |||| ||| ||||| ||||| |||| |||||| || ||||| Sbjct 5178920 ATTGCTGCTCTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTATTGCAGGCATCTTT 5178979 Query 147588 GAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGAT--------AAACCTA 147639 | |||||||||| || |||||| || || | || | ||| ||||| Sbjct 5178980 GTAGAGCATGTATGGAGTGCCGGTTTCAGTCTGGGACTCTATGATGGCATGCCAAACC-- 5179037 Query 147640 TGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTAC 147699 ||| || ||| | | ||| |||| || |||||| || || ||||| ||| Sbjct 5179038 TGCTGGGCCTTCAC---CACACGCT--TGA-CGCGGCCTTCTTTCTCGTATTTGGTGTAG 5179091 Query 147700 AACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATC 147759 | | ||||||||| || || |||| || || |||||||| | | |||||||| Sbjct 5179092 AGCTTCTCAAACTCCTCCCCCCAGCACTCATTCAGCCCGGGACATTCGTCTGGACACATT 5179151 Query 147760 AGCGACCACATGTCGTCCGCGTTA------ACGCGTCGCATAAACAGATCCGGCACCCAC 147813 || ||||| |||| |||| || | ||| |||| || || | |||| Sbjct 5179152 AGAGACCA------GTCCTGGTTACTCTCCACCCTCTTCATGAACAAGTCAGGGATCCAC 5179205 Query 147814 AGCGCGTACATAAGATCGC--GCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAAT 147871 | |||| | ||| || | || || ||| ||||| || |||| ||||| | Sbjct 5179206 ATACCGTAGAAAAGGTCTCTGGCTCTCTGC--TCCTCTTTTCCAGTGTTCTTCTTCAACT 5179263 Query 147872 TAAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTAC 147931 || | | | | || |||| ||||||||||| | ||| | ||| | || || | Sbjct 5179264 CCAGGAAGTCAAATATATCGGAATGCCAGGGTTCCAGGTACATGGCGAAAGCCCCAGGCC 5179323 Query 147932 GC---TTTCCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTT 147988 | ||||| |||||||| |||| ||| | ||||||| | || | || |||||| Sbjct 5179324 TCTTGTTTCCACCCTGGTCCACATAGCGTGCGGTGTTGTTGTAAACTCTCAGCATGGGGA 5179383 Query 147989 CCAGGCCGCTCGCAGTGCCGTTGGTG 148014 | || || | | |||| |||||| Sbjct 5179384 CAAGCCCATTGGAGTTGCCATTGGTG 5179409 >seq15 Length=11516971 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||| | ||| || |||||| ||||| || || | | Sbjct 2476779 GACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCA 2476838 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| ||||| || || |||||||| || || || || |||| Sbjct 2476839 AAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACG 2476898 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || ||| | |||||||| || | || | || || |||||||| |||||| Sbjct 2476899 TTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTT 2476958 Query 132110 ATGAAAATCTGCATG 132124 | || ||||||||| Sbjct 2476959 ACAAAGATCTGCATG 2476973 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||| | ||| || |||||| ||||| || || | | Sbjct 2477007 GACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCA 2477066 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| ||||| || || |||||||| || || || || |||| Sbjct 2477067 AAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACG 2477126 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || ||| | |||||||| || | || | || || |||||||| |||||| Sbjct 2477127 TTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTT 2477186 Query 132110 ATGAAAATCTGCATG 132124 | || ||||||||| Sbjct 2477187 ACAAAGATCTGCATG 2477201 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||| | ||| || |||||| ||||| || || | | Sbjct 2477235 GACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCA 2477294 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| ||||| || || |||||||| || || || || |||| Sbjct 2477295 AAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACG 2477354 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || ||| | |||||||| || | || | || || |||||||| |||||| Sbjct 2477355 TTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTT 2477414 Query 132110 ATGAAAATCTGCATG 132124 | || ||||||||| Sbjct 2477415 ACAAAGATCTGCATG 2477429 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||| | ||| || |||||| ||||| || || | | Sbjct 2477463 GACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCA 2477522 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| ||||| || || |||||||| || || || || |||| Sbjct 2477523 AAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACA 2477582 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | |||||||| || | || | || || |||||||| |||||| Sbjct 2477583 TTCTCAATGGTGTCACTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTT 2477642 Query 132110 ATGAAAATCTGCATG 132124 | || ||||||||| Sbjct 2477643 ACAAAGATCTGCATG 2477657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476570479530600