Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq19 104 7e-19 seq2 104 7e-19 seq5474 98.7 3e-17 seq2465 98.7 3e-17 seq972 98.7 3e-17 seq407 98.7 3e-17 seq14 98.7 3e-17 seq12 98.7 3e-17 seq3 98.7 3e-17 >seq19 Length=14185242 Score = 104 bits (114), Expect = 7e-19 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||| | |||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 13485423 GCTGGAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 13485482 Query 2829 CCGGGCTTCAGC 2840 ||||| | |||| Sbjct 13485483 CCGGGTTCCAGC 13485494 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 4643603 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 4643662 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 4643663 CCGGGTTTCGGC 4643674 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| ||||| |||||||||||||||||||||||| | | Sbjct 4649759 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGATTGAAGATCTAAAGGTCCCTGGTTCGATC 4649700 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 4649699 CCGGGTTTCGGC 4649688 Score = 91.5 bits (100), Expect = 5e-15 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| ||| |||||||||||||||||| | ||||||||||||| |||||||||||||| | Sbjct 10397506 GGCCGAAATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCGAT 10397565 Query 2828 CCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 10397566 CCCGGGTTTCGGC 10397578 Score = 87.8 bits (96), Expect = 6e-14 Identities = 64/73 (88%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTT-GGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 || ||| |||||||||| |||||||| ||||||||||| |||||||||||||||||| | Sbjct 10364749 GCCGAAATAGCTCAGTTTGGGAGAGCGTTAGACTGAAGCTCTAAAGGTCCCTGGTTCGAT 10364808 Query 2828 CCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 10364809 CCCGGGTTTCGGC 10364821 >seq2 Length=11407286 Score = 104 bits (114), Expect = 7e-19 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 10069766 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 10069707 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 10069706 CCGGGTTTCGGC 10069695 Score = 82.4 bits (90), Expect = 2e-12 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 2773 AAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 || || ||||| ||||||||| ||||||||||||||||||||||||||||| | ||||| Sbjct 10086718 AAATACCTCAGATGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTTGATCCCGG 10086777 Query 2833 GCTTCAGC 2840 | ||| || Sbjct 10086778 GGTTCGGC 10086785 >seq5474 Length=5776 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 93 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 152 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 153 CCGGGTTTCGGC 164 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 4375 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 4434 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 4435 CCGGGTTTCGGC 4446 >seq2465 Length=2438 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 2276 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 2217 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 2216 CCGGGTTTCGGC 2205 >seq972 Length=34394 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 32130 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 32189 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 32190 CCGGGTTTCGGC 32201 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 33641 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 33700 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 33701 CCGGGTTTCGGC 33712 >seq407 Length=3689 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 1038 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 979 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 978 CCGGGTTTCGGC 967 >seq14 Length=12328026 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 1859154 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1859213 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1859214 CCGGGTTTCGGC 1859225 >seq12 Length=10661439 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 2807285 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 2807226 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 2807225 CCGGGTTTCGGC 2807214 Score = 86.0 bits (94), Expect = 2e-13 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||| ||||||||| ||||||||||| |||||||| |||| |||||||| Sbjct 2032216 GCCGAAATAGCTCAGCTGGGAGAGCGTTAGACTGAAGTTCTAAAGGACCCTCGTTCAACC 2032275 Query 2829 CCGGGCTTCAGC 2840 | ||| ||| || Sbjct 2032276 CTGGGTTTCGGC 2032287 Score = 86.0 bits (94), Expect = 2e-13 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||| ||||||||| ||||||||||| |||||||| |||| |||||||| Sbjct 2032793 GCCGAAATAGCTCAGCTGGGAGAGCGTTAGACTGAAGTTCTAAAGGACCCTCGTTCAACC 2032852 Query 2829 CCGGGCTTCAGC 2840 | ||| ||| || Sbjct 2032853 CTGGGTTTCGGC 2032864 >seq3 Length=13093193 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 8398407 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 8398466 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 8398467 CCGGGTTTCGGC 8398478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15848415118575