Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq1303 105 1e-17 >seq1303 Length=194977 Score = 105 bits (116), Expect = 1e-17 Identities = 159/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 214005 ACGGGGAAGTCTACCCTCCTACCGTCAAGGAGGCCCGAGTGCATATGGTTTACGAACCCA 214064 |||||||||| ||||| || || || ||||| | | | | ||| ||| |||| Sbjct 54419 ACGGGGAAGTGTACCCGCCAACAGTGAAGGACGTGGGGGCTGACATGCACTACCCCCCCA 54360 Query 214065 GCGTTCCCGAAAAGTTACGTTTCGCACTGGGTAACGAGATGTTTGGACTCGTGCCCGGTT 214124 | ||||||| ||| |||| ||||| ||||| || || || || || || Sbjct 54359 ACATTCCCGAGTCTGAACGCCTCGCGGTGGGTCACGAGGCCTTCGGTCTGGTACCGGGCC 54300 Query 214125 TCATGGTGTACGCCATTATCTGGCTGAGAGAGCACAACAGGGTTTGCGACGTGCTGAAAC 214184 | ||| |||| |||| ||||||||| | || |||||| |||| || |||||| |||| Sbjct 54299 TGATGATGTATGCCACTATCTGGCTTCGGGAACACAACCGGGTGTGTGACGTGTTGAAGG 54240 Query 214185 AAGAGCACCCGGAATGGAACGACGAACAGCTGTTCCAGATCACTCG 214230 | | ||||| || ||| |||||||| ||||||||||| ||| || Sbjct 54239 AGGTTCACCCAGACTGGGACGACGAAAGGCTGTTCCAGACCACGCG 54194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723278999570400