Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq11 109 5e-19 >seq11 Length=11238946 Score = 109 bits (120), Expect = 5e-19 Identities = 267/400 (67%), Gaps = 11/400 (3%) Strand=Plus/Plus Query 131602 GGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAA 131661 |||||||||| ||||||||||| ||||| | ||| || || | |||||| || Sbjct 5179130 GGGACATTCGTCTGGACACATTAGAGACCAGTCCTGGTTACTCTCCACCCTCTTCATGAA 5179189 Query 131662 CAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCAT 131721 ||| || || | ||| | |||| || || ||||| ||| | | ||| ||| | || | Sbjct 5179190 CAAGTCAGGGATCCACATACCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCTTTTCCAGT 5179249 Query 131722 AAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGC 131781 | || ||||| | | ||||| || || || | |||||||||||||| |||| || Sbjct 5179250 GTTCTTCTTCAACTCCAGGAAGTCAAATATATCGGAATGCCAGGGTTCCAGGTACATGGC 5179309 Query 131782 CATTGC-----GCCT-TTGCGCTTACCGCCTTGATTAACATGACGAACCATGTTGTTGTA 131835 | || |||| ||| || || || || | |||| || | |||||||||| Sbjct 5179310 GAAAGCCCCAGGCCTCTTG---TTTCCACCCTGGTCCACATAGCGTGCGGTGTTGTTGTA 5179366 Query 131836 TACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCC 131895 || | || |||||| | | || |||| ||| |||||||||| ||||| || || Sbjct 5179367 AACTCTCAGCATGGGGACAAGCCCATTGGAGTTGCCATTGGTGCCAGCGATGTAACTTCC 5179426 Query 131896 ATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCC-GCCGTATTTAGAGATTAGTG 131954 | | |||||| | ||| | || || ||||| |||| | || ||||| || | Sbjct 5179427 CGTAGATCTGATGCAGCTGACGGCCACACCGATTCCTCCAGCCG-ACTTGGAGATGAGCG 5179485 Query 131955 CGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTC 131994 |||| | | || |||| ||| || || || | |||||| Sbjct 5179486 CGCACTGTTTCAGCGTGTCATAAATGCCCTCGATGCTGTC 5179525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424899002300520