Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq11 109 5e-19
>seq11
Length=11238946
Score = 109 bits (120), Expect = 5e-19
Identities = 267/400 (67%), Gaps = 11/400 (3%)
Strand=Plus/Plus
Query 131602 GGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAA 131661
|||||||||| ||||||||||| ||||| | ||| || || | |||||| ||
Sbjct 5179130 GGGACATTCGTCTGGACACATTAGAGACCAGTCCTGGTTACTCTCCACCCTCTTCATGAA 5179189
Query 131662 CAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCAT 131721
||| || || | ||| | |||| || || ||||| ||| | | ||| ||| | || |
Sbjct 5179190 CAAGTCAGGGATCCACATACCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCTTTTCCAGT 5179249
Query 131722 AAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGC 131781
| || ||||| | | ||||| || || || | |||||||||||||| |||| ||
Sbjct 5179250 GTTCTTCTTCAACTCCAGGAAGTCAAATATATCGGAATGCCAGGGTTCCAGGTACATGGC 5179309
Query 131782 CATTGC-----GCCT-TTGCGCTTACCGCCTTGATTAACATGACGAACCATGTTGTTGTA 131835
| || |||| ||| || || || || | |||| || | ||||||||||
Sbjct 5179310 GAAAGCCCCAGGCCTCTTG---TTTCCACCCTGGTCCACATAGCGTGCGGTGTTGTTGTA 5179366
Query 131836 TACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCC 131895
|| | || |||||| | | || |||| ||| |||||||||| ||||| || ||
Sbjct 5179367 AACTCTCAGCATGGGGACAAGCCCATTGGAGTTGCCATTGGTGCCAGCGATGTAACTTCC 5179426
Query 131896 ATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCC-GCCGTATTTAGAGATTAGTG 131954
| | |||||| | ||| | || || ||||| |||| | || ||||| || |
Sbjct 5179427 CGTAGATCTGATGCAGCTGACGGCCACACCGATTCCTCCAGCCG-ACTTGGAGATGAGCG 5179485
Query 131955 CGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTC 131994
|||| | | || |||| ||| || || || | ||||||
Sbjct 5179486 CGCACTGTTTCAGCGTGTCATAAATGCCCTCGATGCTGTC 5179525
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424899002300520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |