Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq11 235 7e-57 seq15 82.4 1e-10 >seq11 Length=11238946 Score = 235 bits (260), Expect = 7e-57 Identities = 959/1487 (64%), Gaps = 36/1487 (2%) Strand=Plus/Plus Query 110615 TTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACA 110674 ||||| |||| | ||| | || ||| | | ||||| |||| |||||| ||||||| Sbjct 5178234 TTCATGTCCTCGTTCCACAACCCCCTCTCCGTCAGGTCTTTGAGGAGGTGAGGGTTGACA 5178293 Query 110675 ATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAG 110734 || ||||| || | ||| || | ||||||||| | ||||| | ||| | Sbjct 5178294 ATCTGGAACTCCCCGGACAGGACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCTTCGATA 5178353 Query 110735 CATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGA 110794 | || || || |||| ||| || ||||| ||||| || ||||| || || | | ||| Sbjct 5178354 GACTCGTTGTTGCCCAGGATCTGGGCGGTTGAGGCGGTGGGCATCGGGGCTAAGAGCAGA 5178413 Query 110795 CTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGA-G 110853 ||||| | | || | || ||| |||||| || | | |||||| | | | Sbjct 5178414 CTGTTCCTCACGCCGTGCTTGGCGATTTTTTCCTTTAGCAGCTTCCAGTCCAACAGGTCG 5178473 Query 110854 CTTGGTTTCACCTTCCCACATGTCAAACTGAAGCAC-CCCTTGG-GACGCGGGAGAACCC 110911 | || || || |||||||||| ||||||| | |||||| ||| ||||| || Sbjct 5178474 GTGGGCGTCTTCT-CCCACATGTCGTACTGAAGGATGCCCTTGCTGACCGGGGAG--CCT 5178530 Query 110912 TCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCG 110971 || ||||||| || | || | | |||||| || ||||||||||| |||| |||| Sbjct 5178531 TCGTAGGTTTCGTATGGCCCGAGCTCGGCAGCCAGCTCGCAGCTCGCCTCGAGGGCTGCG 5178590 Query 110972 TGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCG 111031 | || ||||| || ||||| | | |||| || ||||| || || | | Sbjct 5178591 TAGTAGATGGTCTCGAAGATCTGGGTGTTCAGAAGCTGAGCTTCGGGGCTTTCGAACGGG 5178650 Query 111032 TAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGT 111091 || || | || ||| | || || | ||| || ||||| | || || || ||||| Sbjct 5178651 TAACGCATGAGGATGAATGCGTCGGCCAAACCCTGGACACCGATTCCTATTGGCCTGTGG 5178710 Query 111092 CGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGG 111148 ||| | || ||||| | ||| || || ||||| |||| | || |||| | Sbjct 5178711 CGCTTGTTGGACTT---CTCAGCTTCGGGCACTGGATAGTAATTAATATCTATGATCTTG 5178767 Query 111149 TTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGA 111208 || | |||||| ||| | ||| || | || ||||||| | | |||||||| || Sbjct 5178768 TTCAAGTTTTTGACAACTACCTTGGTCACAGCAGCTAGTTTTTGAAAGTCAAAAGTCCG- 5178826 Query 111209 GTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCA 111268 ||| | |||| ||| | || |||| || |||| ||| ||||| || ||| Sbjct 5178827 --CTCAGCGGTGACGTACATGTTGAGTGCGACGGAGGCCAGATTACAAACCGCTACCTCG 5178884 Query 111269 TCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAA 111328 || | ||||| || | ||||||||| |||| ||| ||||| || || |||| | Sbjct 5178885 TCGCTGCTGGTGTATTCCACAATTTCTGTGCATAGATTGCTGCTCTTGATGGTGCCCAGA 5178944 Query 111329 TTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTC 111388 |||| ||||| |||||| | ||||| ||||| |||||||||||||| || || || || Sbjct 5178945 TTCTGCTGGTTGCTCTTCCTATTGCAGGCATCTTTGTAGAGCATGTATGGAGTGCCGGTT 5179004 Query 111389 TCCGTCTGTGATTTGAGAATAGCCTTCCAAACAT-CGGCGGCTGGTACAATGGCGTTGGC 111447 || ||||| || | | || || | |||||| | | | | || || || ||| | Sbjct 5179005 TCAGTCTGGGACTCTATGATGGCATGCCAAACCTGCTGGGCCTTCACCACACGC-TTGAC 5179063 Query 111448 CCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGC-GTCGG 111506 || || || |||||| || |||||||| ||||||||||| ||| | || || Sbjct 5179064 GCGGCCTTCTTTCTCGTATTTGGTGTAGAGCTTCTCAAACTCCTC-CCCCCAGCACTCAT 5179122 Query 111507 AGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTT--CCTCAACCCG 111564 || || || | ||||||||| | |||||||| | || || ||| |||| Sbjct 5179123 TCAGCCCGGGACATTCGTCTGGACACATTAGAGACCA--GTCCTGGTTACTCTCCACCCT 5179180 Query 111565 CTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTC 111624 ||||||||| | ||| || ||||||| | || || ||||| | ||| || Sbjct 5179181 CTTCATGAACAAGTCAGGGATCCACATACCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTC 5179240 Query 111625 GTCACCTTGGTTGAGTCGT-AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAA 111683 | || ||| || | ||||| ||||| || | ||||| | ||||| || || | Sbjct 5179241 TTTTCCAGTGTT-CTTCTTCAACTCCAGGAAGTCAAATATATCGGAATGCCAGGGTTCCA 5179299 Query 111684 GATAGACTGCGATAG----ATCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTG 111739 | || | |||| || | ||| | | ||| | || | |||||||| || ||| Sbjct 5179300 GGTACATGGCGAAAGCCCCAGGCCTCTTG-TTTCCACCCTGGTCCACATAGCGTGCGGTG 5179358 Query 111740 GCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATA 111799 ||| | || | ||||| || | || |||| || | ||||| || || || Sbjct 5179359 TTGTTGTAAACTCTCAGCATGGGGACAAGCCCATTGGAGTTGCCATTGGTGCCAGCGATG 5179418 Query 111800 CGAGATTTATTGGCTCTCA--CATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTG 111857 | | | | ||| | || | || | || || || || |||||| |||| | Sbjct 5179419 TAACTTCCCGTAGATCTGATGCAGC--TGACGGCCACACCGATTCCTCCAGCCGACTTGG 5179476 Query 111858 AGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGG 111917 |||| |||| |||| | || || |||| || || | ||| ||| ||||| ||| Sbjct 5179477 AGATGAGCGCGCACTGTTTCAGCGTGTCATAAATGCCCTCGATGCTGTCATCCTTCATGG 5179536 Query 111918 CGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTG 111977 ||| |||||||| ||||||| ||| || || ||||| ||||| ||||| || || | Sbjct 5179537 CGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTGGTACCTGCATTAAAGAGTGTCGGGG 5179596 Query 111978 TTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATG 112036 || || ||||| || | | |||| | || ||| || || | | | |||||| Sbjct 5179597 AGGCATGGGTGAAC-CACTTCTCTGACAGCAGGTTGTAGGTTTCAATCGCTGCATCAATA 5179655 Query 112037 TCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083 ||| ||||| || | | |||| ||||| ||||| ||| || Sbjct 5179656 TCTGTTTGATGGATCCCCACAGAAACCCTCATGAGCATGTGCTGCGG 5179702 >seq15 Length=11516971 Score = 82.4 bits (90), Expect = 1e-10 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 111265 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCC 111324 |||||| || |||||||||| ||| ||||| || | ||| || || || || Sbjct 9312816 CTCATCTTTGCTCGTGTACTCTACAATCTCTGTGCACAGATTGCTGGATTTGATGGTGCC 9312875 Query 111325 CAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 111384 || |||| ||||| |||||| ||||||| || ||||||||||||||||| || || || Sbjct 9312876 CAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTATGGTGTGCC 9312935 Query 111385 CGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA 111417 || || || || || | || || || | ||| Sbjct 9312936 GGTTTCTGTTTGAGACTCGATGATGGCGTACCA 9312968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627978342516000