Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq11 235 7e-57
seq15 82.4 1e-10
>seq11
Length=11238946
Score = 235 bits (260), Expect = 7e-57
Identities = 959/1487 (64%), Gaps = 36/1487 (2%)
Strand=Plus/Plus
Query 110615 TTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACA 110674
||||| |||| | ||| | || ||| | | ||||| |||| |||||| |||||||
Sbjct 5178234 TTCATGTCCTCGTTCCACAACCCCCTCTCCGTCAGGTCTTTGAGGAGGTGAGGGTTGACA 5178293
Query 110675 ATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAG 110734
|| ||||| || | ||| || | ||||||||| | ||||| | ||| |
Sbjct 5178294 ATCTGGAACTCCCCGGACAGGACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCTTCGATA 5178353
Query 110735 CATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGA 110794
| || || || |||| ||| || ||||| ||||| || ||||| || || | | |||
Sbjct 5178354 GACTCGTTGTTGCCCAGGATCTGGGCGGTTGAGGCGGTGGGCATCGGGGCTAAGAGCAGA 5178413
Query 110795 CTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGA-G 110853
||||| | | || | || ||| |||||| || | | |||||| | | |
Sbjct 5178414 CTGTTCCTCACGCCGTGCTTGGCGATTTTTTCCTTTAGCAGCTTCCAGTCCAACAGGTCG 5178473
Query 110854 CTTGGTTTCACCTTCCCACATGTCAAACTGAAGCAC-CCCTTGG-GACGCGGGAGAACCC 110911
| || || || |||||||||| ||||||| | |||||| ||| ||||| ||
Sbjct 5178474 GTGGGCGTCTTCT-CCCACATGTCGTACTGAAGGATGCCCTTGCTGACCGGGGAG--CCT 5178530
Query 110912 TCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCG 110971
|| ||||||| || | || | | |||||| || ||||||||||| |||| ||||
Sbjct 5178531 TCGTAGGTTTCGTATGGCCCGAGCTCGGCAGCCAGCTCGCAGCTCGCCTCGAGGGCTGCG 5178590
Query 110972 TGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCG 111031
| || ||||| || ||||| | | |||| || ||||| || || | |
Sbjct 5178591 TAGTAGATGGTCTCGAAGATCTGGGTGTTCAGAAGCTGAGCTTCGGGGCTTTCGAACGGG 5178650
Query 111032 TAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGT 111091
|| || | || ||| | || || | ||| || ||||| | || || || |||||
Sbjct 5178651 TAACGCATGAGGATGAATGCGTCGGCCAAACCCTGGACACCGATTCCTATTGGCCTGTGG 5178710
Query 111092 CGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGG 111148
||| | || ||||| | ||| || || ||||| |||| | || |||| |
Sbjct 5178711 CGCTTGTTGGACTT---CTCAGCTTCGGGCACTGGATAGTAATTAATATCTATGATCTTG 5178767
Query 111149 TTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGA 111208
|| | |||||| ||| | ||| || | || ||||||| | | |||||||| ||
Sbjct 5178768 TTCAAGTTTTTGACAACTACCTTGGTCACAGCAGCTAGTTTTTGAAAGTCAAAAGTCCG- 5178826
Query 111209 GTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCA 111268
||| | |||| ||| | || |||| || |||| ||| ||||| || |||
Sbjct 5178827 --CTCAGCGGTGACGTACATGTTGAGTGCGACGGAGGCCAGATTACAAACCGCTACCTCG 5178884
Query 111269 TCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAA 111328
|| | ||||| || | ||||||||| |||| ||| ||||| || || |||| |
Sbjct 5178885 TCGCTGCTGGTGTATTCCACAATTTCTGTGCATAGATTGCTGCTCTTGATGGTGCCCAGA 5178944
Query 111329 TTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTC 111388
|||| ||||| |||||| | ||||| ||||| |||||||||||||| || || || ||
Sbjct 5178945 TTCTGCTGGTTGCTCTTCCTATTGCAGGCATCTTTGTAGAGCATGTATGGAGTGCCGGTT 5179004
Query 111389 TCCGTCTGTGATTTGAGAATAGCCTTCCAAACAT-CGGCGGCTGGTACAATGGCGTTGGC 111447
|| ||||| || | | || || | |||||| | | | | || || || ||| |
Sbjct 5179005 TCAGTCTGGGACTCTATGATGGCATGCCAAACCTGCTGGGCCTTCACCACACGC-TTGAC 5179063
Query 111448 CCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGC-GTCGG 111506
|| || || |||||| || |||||||| ||||||||||| ||| | || ||
Sbjct 5179064 GCGGCCTTCTTTCTCGTATTTGGTGTAGAGCTTCTCAAACTCCTC-CCCCCAGCACTCAT 5179122
Query 111507 AGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTT--CCTCAACCCG 111564
|| || || | ||||||||| | |||||||| | || || ||| ||||
Sbjct 5179123 TCAGCCCGGGACATTCGTCTGGACACATTAGAGACCA--GTCCTGGTTACTCTCCACCCT 5179180
Query 111565 CTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTC 111624
||||||||| | ||| || ||||||| | || || ||||| | ||| ||
Sbjct 5179181 CTTCATGAACAAGTCAGGGATCCACATACCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTC 5179240
Query 111625 GTCACCTTGGTTGAGTCGT-AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAA 111683
| || ||| || | ||||| ||||| || | ||||| | ||||| || || |
Sbjct 5179241 TTTTCCAGTGTT-CTTCTTCAACTCCAGGAAGTCAAATATATCGGAATGCCAGGGTTCCA 5179299
Query 111684 GATAGACTGCGATAG----ATCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTG 111739
| || | |||| || | ||| | | ||| | || | |||||||| || |||
Sbjct 5179300 GGTACATGGCGAAAGCCCCAGGCCTCTTG-TTTCCACCCTGGTCCACATAGCGTGCGGTG 5179358
Query 111740 GCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATA 111799
||| | || | ||||| || | || |||| || | ||||| || || ||
Sbjct 5179359 TTGTTGTAAACTCTCAGCATGGGGACAAGCCCATTGGAGTTGCCATTGGTGCCAGCGATG 5179418
Query 111800 CGAGATTTATTGGCTCTCA--CATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTG 111857
| | | | ||| | || | || | || || || || |||||| |||| |
Sbjct 5179419 TAACTTCCCGTAGATCTGATGCAGC--TGACGGCCACACCGATTCCTCCAGCCGACTTGG 5179476
Query 111858 AGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGG 111917
|||| |||| |||| | || || |||| || || | ||| ||| ||||| |||
Sbjct 5179477 AGATGAGCGCGCACTGTTTCAGCGTGTCATAAATGCCCTCGATGCTGTCATCCTTCATGG 5179536
Query 111918 CGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTG 111977
||| |||||||| ||||||| ||| || || ||||| ||||| ||||| || || |
Sbjct 5179537 CGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTGGTACCTGCATTAAAGAGTGTCGGGG 5179596
Query 111978 TTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATG 112036
|| || ||||| || | | |||| | || ||| || || | | | ||||||
Sbjct 5179597 AGGCATGGGTGAAC-CACTTCTCTGACAGCAGGTTGTAGGTTTCAATCGCTGCATCAATA 5179655
Query 112037 TCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083
||| ||||| || | | |||| ||||| ||||| ||| ||
Sbjct 5179656 TCTGTTTGATGGATCCCCACAGAAACCCTCATGAGCATGTGCTGCGG 5179702
>seq15
Length=11516971
Score = 82.4 bits (90), Expect = 1e-10
Identities = 110/153 (72%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 111265 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCC 111324
|||||| || |||||||||| ||| ||||| || | ||| || || || ||
Sbjct 9312816 CTCATCTTTGCTCGTGTACTCTACAATCTCTGTGCACAGATTGCTGGATTTGATGGTGCC 9312875
Query 111325 CAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 111384
|| |||| ||||| |||||| ||||||| || ||||||||||||||||| || || ||
Sbjct 9312876 CAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTATGGTGTGCC 9312935
Query 111385 CGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA 111417
|| || || || || | || || || | |||
Sbjct 9312936 GGTTTCTGTTTGAGACTCGATGATGGCGTACCA 9312968
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627978342516000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |