Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq11 205 1e-47
seq15 89.7 6e-13
seq1226 84.2 3e-11
>seq11
Length=11238946
Score = 205 bits (226), Expect = 1e-47
Identities = 833/1301 (64%), Gaps = 34/1301 (3%)
Strand=Plus/Plus
Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241
||||| ||| | ||||| | || | |||| ||||| |||| ||| ||||| || |||
Sbjct 5178327 TAGATGTTGCTGGTGTAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGGGCGGTTGAG 5178386
Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301
|| |||||||| || || | ||| || ||||| | | || | | || ||||
Sbjct 5178387 GCGGTGGGCATCGGGGCTAAGAGCAGACTGTTCCTCACGCCGTGCTTGGCGATTTTTTCC 5178446
Query 118302 TTGAG-AGCGTCCCAGTC------GTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAA 118354
|| || ||| ||| |||| || | || || | |||||| |||| || |
Sbjct 5178447 TTTAGCAGCTTCC-AGTCCAACAGGTCGGTGGGCGTCTTCTCCC------ACATGTCGTA 5178499
Query 118355 CTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTC 118414
||| ||||| || | | | || || || || | || || ||||| || | |
Sbjct 5178500 CTGAAGGATGCCCTTGCTGACCGGGGAGCCTTCGTAGGTTTCGTATGGCCCGAGCTCGGC 5178559
Query 118415 CGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATT 118474
|||| ||| ||||||||||||||||||||| || || || || || || | | ||
Sbjct 5178560 AGCCAGCTCGCAGCTCGCCTCGAGGGCTGCGTAGTAGATGGTCTCGAAGATCTGGGTGTT 5178619
Query 118475 CATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAG 118534
|| || || ||| | || |||| | || | || ||| | || || |
Sbjct 5178620 CAGAAGCTGAGCTTCGGGGCTTTCGAACGGGTAACGCATGAGGATGAATGCGTCGGCCAA 5178679
Query 118535 ACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCAC 118594
||| |||||||||| || ||||| | || | | | || |||||| ||| |||
Sbjct 5178680 ACCCTGGACACCGATTCCTATTGGCCTGTGGCGCTTGTTGGACTTCTCAGCTTCGGGCAC 5178739
Query 118595 GGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTC 118654
||||| |||| |||| || | | | || | |||||| || ||||| || | |
Sbjct 5178740 TGGATAGTAATTAATATCTATGATCTTGTTCAAGTTTTTGACAACTACCTTGGTCACAGC 5178799
Query 118655 ATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGAT 118714
| || |||| | |||||| | || ||| | |||| ||| | || ||||
Sbjct 5178800 AGCTAGTTTTTGAAAGTCAAAAGTCCG---CTCAGCGGTGACGTACATGTTGAGTGCGAC 5178856
Query 118715 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCA 118774
|| ||||||||||| || | ||| || | ||||| || | |||||| |||||
Sbjct 5178857 GGAGGCCAGATTACAAACCGCTACCTCGTCGCTGCTGGTGTATTCCACAATTTCTGTGCA 5178916
Query 118775 CAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 118834
| || ||||| |||||||||| |||| || || ||| | || || |||||
Sbjct 5178917 TAGATTGCTGCTCTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTATTGCAGGCATC 5178976
Query 118835 CTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGAC 118894
||||| ||||||||||| || || || || || ||||||| | || || | ||| ||
Sbjct 5178977 TTTGTAGAGCATGTATGGAGTGCCGGTTTCAGTCTGGGACTCTATGATGGCATGCCAAAC 5179036
Query 118895 AT-CGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGG 118953
| | | || || || ||| | || || |||| |||||| || ||||||||
Sbjct 5179037 CTGCTGGGCCTTCACCACACGC-TTGACGCGGCCTTCTTTCTCGTATTTGGTGTAGAGCT 5179095
Query 118954 CTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAG 119013
|||||||| || ||| | ||| ||||| || | ||||| || | ||||
Sbjct 5179096 TCTCAAACTCCTCCCCCCAGCACTCATTCAGCCCGGGACATTCGTCTGGACACATTAGAG 5179155
Query 119014 ACCA---TTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG 119070
|||| || || |||| |||| ||||||||| | ||| |||||||| | |
Sbjct 5179156 ACCAGTCCTGGTTACTCTCC---ACCCTCTTCATGAACAAGTCAGGGATCCACATACCGT 5179212
Query 119071 AGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAG 119129
|||| || || | | | ||| || | || || || |||||||| |||
Sbjct 5179213 AGAAAAGGTCTCTGGCTCTCTGCTCCTCTTTTCCAGTG-TTCTTCTTCAACTCCAGGAAG 5179271
Query 119130 TCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC---CTTACGACGA 119186
|| | ||||| | ||||| ||||||||||||| |||| | ||| | |
Sbjct 5179272 TCAAATATATCGGAATGCCAGGGTTCCAGGTACATGGCGAAAGCCCCAGGCCTCTTGTTT 5179331
Query 119187 CCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCA 119246
||| |||||| ||||| | || ||| ||| | || | ||||| || | | |||
Sbjct 5179332 CCACCCTGGTCCACATAGCGTGCGGTGTTGTTGTAAACTCTCAGCATGGGGACAAGCCCA 5179391
Query 119247 TCGGATTGGCCATTTGTCCCCCGAATACGAGACTT--ATTGGCTCTGACATCGTGGATGT 119304
| ||| | |||||| || || || | |||| | | ||||| | || |
Sbjct 5179392 TTGGAGTTGCCATTGGTGCCAGCGAT--GTAACTTCCCGTAGATCTGATGCAGCTGACGG 5179449
Query 119305 GCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGA 119364
|| ||| || || || ||| |||| ||||| ||||||||| | || || | || |
Sbjct 5179450 CCACACCGATTCCTCCAGCCGACTTGGAGATGAGCGCGCACTGTTTCAGCGTGTCATAAA 5179509
Query 119365 TCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGG 119424
| || ||||| |||| |||| | |||| ||||||||||| |||| || ||||||
Sbjct 5179510 TGCCCTCGATGCTGTCATCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGT 5179569
Query 119425 GTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAAC 119465
||||| || || ||||| || || | || ||| |||||
Sbjct 5179570 TGGTACCTGCATTAAAGAGTGTCGGGGAGGCATGGGTGAAC 5179610
>seq15
Length=11516971
Score = 89.7 bits (98), Expect = 6e-13
Identities = 75/92 (82%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241
||||| ||| | ||||| | ||| | | |||| ||||| |||| ||| ||||| ||||||
Sbjct 9311918 TAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTCCCCAGGATCTGGGCGGTGGAG 9311977
Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 118273
|||||||||||||| |||| || ||||||||
Sbjct 9311978 GCTGTGGGCATGGGAGCCAGCAGCAGGCTGTT 9312009
Score = 86.0 bits (94), Expect = 8e-12
Identities = 113/155 (73%), Gaps = 4/155 (3%)
Strand=Plus/Plus
Query 118739 CTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTT--TGAACTCTTAATGGTG 118796
|||||| || |||||||||| ||| || ||||||| || || | | | ||||||
Sbjct 9312816 CTCATCTTTGCTCGTGTACTCTACAATCTCTGTGCACAGATTGCTGGATT--TGATGGTG 9312873
Query 118797 CCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTC 118856
|||| ||||| || || ||| |||| || || |||||||| ||||||||||| ||
Sbjct 9312874 CCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTATGGTGTG 9312933
Query 118857 CCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 118891
|| || || ||||| |||| || || || | |||
Sbjct 9312934 CCGGTTTCTGTTTGAGACTCGATGATGGCGTACCA 9312968
>seq1226
Length=411779
Score = 84.2 bits (92), Expect = 3e-11
Identities = 84/109 (77%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 130035 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 130094
||||||| | | |||||| || || |||||| ||| || ||||| || |||| ||||
Sbjct 204644 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCCCTTTTCT 204585
Query 130095 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143
||| |||||| || | | ||| || ||||||||||| || ||||||||
Sbjct 204584 TCAGCCAGAAGATGGAAGCAAAGGACCCAGAGAAGAAAATACCCTCCAC 204536
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618382362442600
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