Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq11 203 4e-47
seq15 84.2 3e-11
>seq11
Length=11238946
Score = 203 bits (224), Expect = 4e-47
Identities = 892/1392 (64%), Gaps = 30/1392 (2%)
Strand=Plus/Minus
Query 104314 GTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAG 104373
||||| || || | || || ||||| ||||| ||||| || || || |||||||
Sbjct 5179610 GTTCACCCATGCCTCCCCGACACTCTTTAATGCAGGTACCAACAGGCCACAGCTGTCCAG 5179551
Query 104374 TTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGA 104433
|||||||| |||||| ||||| ||| ||| | || || |||| || || | |
Sbjct 5179550 CTGCTTCCTGCTCGCCATGAAGGATGACAGCATCGAGGGCATTTATGACACGCTGAAACA 5179491
Query 104434 GTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATG--TGAGA 104491
||| |||| ||||| |||| |||||| || || || || | || | || | |||
Sbjct 5179490 GTGCGCGCTCATCTCCAAGTCGGCTGGAGGAATCGGTGTGGCCGTCA--GCTGCATCAGA 5179433
Query 104492 GCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTT 104551
| | | | || || || ||||| | || |||| || | || |||||
Sbjct 5179432 TCTACGGGAAGTTACATCGCTGGCACCAATGGCAACTCCAATGGGCTTGTCCCCATGCTG 5179373
Query 104552 CGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAAAGGGAT----C 104607
| || | ||| ||| || |||||||| | || | ||| | | ||| | |
Sbjct 5179372 AGAGTTTACAACAACACCGCACGCTATGTGGACCAGGGTGGAAA-CAAGAGGCCTGGGGC 5179314
Query 104608 TATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCT 104667
| |||| | || || || || ||||| | ||||| | || ||||| ||||||
Sbjct 5179313 TTTCGCCATGTACCTGGAACCCTGGCATTCCGATATATTTGACTTCCTGGAGTTGAAGAA 5179254
Query 104668 CAACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGA 104727
||| || | |||||| | | | | || || |||| || | | ||||| || ||
Sbjct 5179253 GAACACTGGAAAAGAGGAGCAGAGAGCCAGAGACCTTTTCTACGGTATGTGGATCCCTGA 5179194
Query 104728 TCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAAT---TGGTCTCTCTTTTGTCCAGACAA 104784
| ||||||||||| || ||||||| | | |||||||| | ||||||||| |
Sbjct 5179193 CTTGTTCATGAAGAGGGT---GGAGAGTAACCAGGACTGGTCTCTAATGTGTCCAGACGA 5179137
Query 104785 GGCACCTGGTCTCTCCGA-TGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACG 104843
|| || || || ||| | ||| ||||||||||| || ||||| || ||||
Sbjct 5179136 ATGTCCCGGGCTGAATGAGTGCTGGGGG-GAGGAGTTTGAGAAGCTCTACACCAAATACG 5179078
Query 104844 AGGAAGAAGGTCGGGCGACTGCGAC-GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTC 104902
|| ||||||| || | | ||| |||| || | || ||| | || || |
Sbjct 5179077 AGAAAGAAGGCCGCGTCAA-GCGTGTGGTGAAGGCCCAGCAGGTTTGGCATGCCATCATA 5179019
Query 104903 AAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAG 104962
|||| || || || || || || ||||||||||| |||||||| ||||| || |||
Sbjct 5179018 GAGTCCCAGACTGAAACCGGCACTCCATACATGCTCTACAAAGATGCCTGCAATAGGAAG 5178959
Query 104963 AGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAA 105022
|| || || ||||| |||| |||||||| |||||| || |||||||| |||||
Sbjct 5178958 AGCAACCAGCAGAATCTGGGCACCATCAAGAGCAGCAATCTATGCACAGAAATTGTGGAA 5178899
Query 105023 TTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTAT 105082
| || || || ||| || || ||||| || || || |||| ||| || |||
Sbjct 5178898 TACACCAGCAGCGACGAGGTAGCGGTTTGTAATCTGGCCTCCGTCGCACTCAACATGTAC 5178839
Query 105083 GTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTC 105142
|| | ||| ||| ||||| | | ||||||| | || || || ||
Sbjct 5178838 GTCACCGCTGAG---CGGACTTTTGACTTTCAAAAACTAGCTGCTGTGACCAAGGTAGTT 5178782
Query 105143 ACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAA 105202
||||||| | |||| | || |||| |||| || || || ||| ||
Sbjct 5178781 GTCAAAAACTTGAACAAGATCATAGATATTAATTACTATCCAGTGCCCGAAGCTGAGAAG 5178722
Query 105203 TCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT 105262
|| || | | | ||| | ||||| || ||||||| |||||| | || || | ||||||
Sbjct 5178721 TCCAACAAGCGCCACAGGCCAATAGGAATCGGTGTCCAGGGTTTGGCCGACGCATTCATC 5178662
Query 105263 CTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAG 105322
|| || || | || || | |||||| || | || | | || || |||
Sbjct 5178661 CTCATGCGTTACCCGTTCGAAAGCCCCGAAGCTCAGCTTCTGAACACCCAGATCTTCGAG 5178602
Query 105323 ACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATAT 105382
||||| || |||| || || |||||||| | ||| |||| | | || |||||
Sbjct 5178601 ACCATCTACTACGCAGCCCTCGAGGCGAGCTGCGAGCTGGCTGCCGAGCTCGGGCCATAC 5178542
Query 105383 GAAACCTTTGAGGGTTCTCCAGCTTCA-CAAGGG-GTGCTTCAATTTGATATGTGGGAAG 105440
||||||| || || || || | ||| |||||| | ||||| | || ||||||| ||
Sbjct 5178541 GAAACCTACGAAGGCTCCCCGG--TCAGCAAGGGCATCCTTCAGTACGACATGTGGG-AG 5178485
Query 105441 GTGA-GACCAAGCTTCACTACGACTGGGAAGCT-CTCAAGGAACGCATCAAGGAGAAGGG 105498
|| | ||| | | |||| ||||||| || |||||| ||| || | ||
Sbjct 5178484 AAGACGCCCACCGACCTGTTGGACT-GGAAGCTGCTAAAGGAAAAAATCGCCAAGCACGG 5178426
Query 105499 TCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGG 105558
| | |||||||| ||| | || || ||||| || ||||| ||||| || ||| ||||
Sbjct 5178425 CGTGAGGAACAGTCTGCTCTTAGCCCCGATGCCCACCGCCTCAACCGCCCAGATCCTGGG 5178366
Query 105559 TAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGG 105618
|| || || | | ||| ||||||| | |||||||| | || ||| | ||
Sbjct 5178365 CAACAACGAGTCTATCGAAGCCTACACCAGCAACATCTACACCCGCAGGGTCCTGTCCGG 5178306
Query 105619 AGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTC 105678
||||| |||||||||| || ||| | | ||||| | |||| || | |||
Sbjct 5178305 GGAGTTCCAGATTGTCAACCCTCACCTCCTCAAAGACCTGACGGAGAGGGGGTTGTGGAA 5178246
Query 105679 CAAGGATATGAA 105690
| |||| |||||
Sbjct 5178245 CGAGGACATGAA 5178234
>seq15
Length=11516971
Score = 84.2 bits (92), Expect = 3e-11
Identities = 123/174 (71%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 104886 TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAG 104945
||||| | || || || |||||||||| || || || |||||||||||||| ||||| |
Sbjct 9312970 TGTGGTACGCCATCATCGAGTCTCAAACAGAAACCGGCACACCATACATGCTCTACAAGG 9312911
Query 104946 ACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCT 105005
||||||| ||| ||||| || || |||| |||| ||||| |||||| |
Sbjct 9312910 ACGCCTGCAACAGGAAGAGCAACCAGCAGAACCTGGGCACCATCAAATCCAGCAATCTGT 9312851
Query 105006 GTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCG 105059
| ||||| || | || | || |||||||||| | ||| | | ||||||
Sbjct 9312850 GCACAGAGATTGTAGAGTACACGAGCAAAGATGAGGTGACTGGGGGAGACCTCG 9312797
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583210967655400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |