Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq11 203 4e-47 seq15 84.2 3e-11 >seq11 Length=11238946 Score = 203 bits (224), Expect = 4e-47 Identities = 892/1392 (64%), Gaps = 30/1392 (2%) Strand=Plus/Minus Query 104314 GTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAG 104373 ||||| || || | || || ||||| ||||| ||||| || || || ||||||| Sbjct 5179610 GTTCACCCATGCCTCCCCGACACTCTTTAATGCAGGTACCAACAGGCCACAGCTGTCCAG 5179551 Query 104374 TTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGA 104433 |||||||| |||||| ||||| ||| ||| | || || |||| || || | | Sbjct 5179550 CTGCTTCCTGCTCGCCATGAAGGATGACAGCATCGAGGGCATTTATGACACGCTGAAACA 5179491 Query 104434 GTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATG--TGAGA 104491 ||| |||| ||||| |||| |||||| || || || || | || | || | ||| Sbjct 5179490 GTGCGCGCTCATCTCCAAGTCGGCTGGAGGAATCGGTGTGGCCGTCA--GCTGCATCAGA 5179433 Query 104492 GCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTT 104551 | | | | || || || ||||| | || |||| || | || ||||| Sbjct 5179432 TCTACGGGAAGTTACATCGCTGGCACCAATGGCAACTCCAATGGGCTTGTCCCCATGCTG 5179373 Query 104552 CGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAAAGGGAT----C 104607 | || | ||| ||| || |||||||| | || | ||| | | ||| | | Sbjct 5179372 AGAGTTTACAACAACACCGCACGCTATGTGGACCAGGGTGGAAA-CAAGAGGCCTGGGGC 5179314 Query 104608 TATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCT 104667 | |||| | || || || || ||||| | ||||| | || ||||| |||||| Sbjct 5179313 TTTCGCCATGTACCTGGAACCCTGGCATTCCGATATATTTGACTTCCTGGAGTTGAAGAA 5179254 Query 104668 CAACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGA 104727 ||| || | |||||| | | | | || || |||| || | | ||||| || || Sbjct 5179253 GAACACTGGAAAAGAGGAGCAGAGAGCCAGAGACCTTTTCTACGGTATGTGGATCCCTGA 5179194 Query 104728 TCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAAT---TGGTCTCTCTTTTGTCCAGACAA 104784 | ||||||||||| || ||||||| | | |||||||| | ||||||||| | Sbjct 5179193 CTTGTTCATGAAGAGGGT---GGAGAGTAACCAGGACTGGTCTCTAATGTGTCCAGACGA 5179137 Query 104785 GGCACCTGGTCTCTCCGA-TGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACG 104843 || || || || ||| | ||| ||||||||||| || ||||| || |||| Sbjct 5179136 ATGTCCCGGGCTGAATGAGTGCTGGGGG-GAGGAGTTTGAGAAGCTCTACACCAAATACG 5179078 Query 104844 AGGAAGAAGGTCGGGCGACTGCGAC-GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTC 104902 || ||||||| || | | ||| |||| || | || ||| | || || | Sbjct 5179077 AGAAAGAAGGCCGCGTCAA-GCGTGTGGTGAAGGCCCAGCAGGTTTGGCATGCCATCATA 5179019 Query 104903 AAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAG 104962 |||| || || || || || || ||||||||||| |||||||| ||||| || ||| Sbjct 5179018 GAGTCCCAGACTGAAACCGGCACTCCATACATGCTCTACAAAGATGCCTGCAATAGGAAG 5178959 Query 104963 AGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAA 105022 || || || ||||| |||| |||||||| |||||| || |||||||| ||||| Sbjct 5178958 AGCAACCAGCAGAATCTGGGCACCATCAAGAGCAGCAATCTATGCACAGAAATTGTGGAA 5178899 Query 105023 TTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTAT 105082 | || || || ||| || || ||||| || || || |||| ||| || ||| Sbjct 5178898 TACACCAGCAGCGACGAGGTAGCGGTTTGTAATCTGGCCTCCGTCGCACTCAACATGTAC 5178839 Query 105083 GTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTC 105142 || | ||| ||| ||||| | | ||||||| | || || || || Sbjct 5178838 GTCACCGCTGAG---CGGACTTTTGACTTTCAAAAACTAGCTGCTGTGACCAAGGTAGTT 5178782 Query 105143 ACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAA 105202 ||||||| | |||| | || |||| |||| || || || ||| || Sbjct 5178781 GTCAAAAACTTGAACAAGATCATAGATATTAATTACTATCCAGTGCCCGAAGCTGAGAAG 5178722 Query 105203 TCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT 105262 || || | | | ||| | ||||| || ||||||| |||||| | || || | |||||| Sbjct 5178721 TCCAACAAGCGCCACAGGCCAATAGGAATCGGTGTCCAGGGTTTGGCCGACGCATTCATC 5178662 Query 105263 CTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAG 105322 || || || | || || | |||||| || | || | | || || ||| Sbjct 5178661 CTCATGCGTTACCCGTTCGAAAGCCCCGAAGCTCAGCTTCTGAACACCCAGATCTTCGAG 5178602 Query 105323 ACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATAT 105382 ||||| || |||| || || |||||||| | ||| |||| | | || ||||| Sbjct 5178601 ACCATCTACTACGCAGCCCTCGAGGCGAGCTGCGAGCTGGCTGCCGAGCTCGGGCCATAC 5178542 Query 105383 GAAACCTTTGAGGGTTCTCCAGCTTCA-CAAGGG-GTGCTTCAATTTGATATGTGGGAAG 105440 ||||||| || || || || | ||| |||||| | ||||| | || ||||||| || Sbjct 5178541 GAAACCTACGAAGGCTCCCCGG--TCAGCAAGGGCATCCTTCAGTACGACATGTGGG-AG 5178485 Query 105441 GTGA-GACCAAGCTTCACTACGACTGGGAAGCT-CTCAAGGAACGCATCAAGGAGAAGGG 105498 || | ||| | | |||| ||||||| || |||||| ||| || | || Sbjct 5178484 AAGACGCCCACCGACCTGTTGGACT-GGAAGCTGCTAAAGGAAAAAATCGCCAAGCACGG 5178426 Query 105499 TCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGG 105558 | | |||||||| ||| | || || ||||| || ||||| ||||| || ||| |||| Sbjct 5178425 CGTGAGGAACAGTCTGCTCTTAGCCCCGATGCCCACCGCCTCAACCGCCCAGATCCTGGG 5178366 Query 105559 TAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGG 105618 || || || | | ||| ||||||| | |||||||| | || ||| | || Sbjct 5178365 CAACAACGAGTCTATCGAAGCCTACACCAGCAACATCTACACCCGCAGGGTCCTGTCCGG 5178306 Query 105619 AGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTC 105678 ||||| |||||||||| || ||| | | ||||| | |||| || | ||| Sbjct 5178305 GGAGTTCCAGATTGTCAACCCTCACCTCCTCAAAGACCTGACGGAGAGGGGGTTGTGGAA 5178246 Query 105679 CAAGGATATGAA 105690 | |||| ||||| Sbjct 5178245 CGAGGACATGAA 5178234 >seq15 Length=11516971 Score = 84.2 bits (92), Expect = 3e-11 Identities = 123/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 104886 TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAG 104945 ||||| | || || || |||||||||| || || || |||||||||||||| ||||| | Sbjct 9312970 TGTGGTACGCCATCATCGAGTCTCAAACAGAAACCGGCACACCATACATGCTCTACAAGG 9312911 Query 104946 ACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCT 105005 ||||||| ||| ||||| || || |||| |||| ||||| |||||| | Sbjct 9312910 ACGCCTGCAACAGGAAGAGCAACCAGCAGAACCTGGGCACCATCAAATCCAGCAATCTGT 9312851 Query 105006 GTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCG 105059 | ||||| || | || | || |||||||||| | ||| | | |||||| Sbjct 9312850 GCACAGAGATTGTAGAGTACACGAGCAAAGATGAGGTGACTGGGGGAGACCTCG 9312797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583210967655400