Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_028379.1
Length=205896
Score E
Sequences producing significant alignments: (Bits) Value
seq9 246 4e-60
>seq9
Length=13922460
Score = 246 bits (272), Expect = 4e-60
Identities = 556/820 (68%), Gaps = 18/820 (2%)
Strand=Plus/Minus
Query 13610 CTACGTGAACATGACGGCCGACTGCGTGGCCTTCGT-GAAAGACAGGGGGT--ATCTCGT 13666
|||| |||| |||||| ||||||| | | | | |||||| ||||||| ||| ||
Sbjct 8684574 CTACATGAATGCGACGGCGGACTGCGCTTCTTACATTGAAAGA-AGGGGGTTCATCACG- 8684517
Query 13667 GAGGCCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCA 13726
||| || |||||| ||| ||| || || |||||||| ||||| || |||||||| |
Sbjct 8684516 GAG-CCTCTGAGCGAGGAGGAGAGAGACTTCCCCATCGCTTACTCCATGGTGATCCATGA 8684458
Query 13727 CAAGATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTG 13786
||| ||||||||||||||||| |||||| ||||||||||| |||| |||||| |||||||
Sbjct 8684457 CAACATCGAGATGTTCGAGCGGCTCCTGCGGGCCATCTACACCCCTCAGAACGTCTACTG 8684398
Query 13787 CGTCCACGTGGACTCCAAGTCCGGCGACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAG 13846
||| || ||||| || ||| || || |||| || |||| || ||
Sbjct 8684397 CGTTCATGTGGATCAGAAATCCAAGGATGAATTCAAGGCGGCCGTCGTGGGGATTATTTC 8684338
Query 13847 GTGCTTCCCTAACGTGGCCCTGGCCCACCGGCT--GCACGACGTGGTGTACGGCTCCTGG 13904
||| ||||||||||| ||||| ||||| | | | | ||||||||||| || |||
Sbjct 8684337 CTGCCTCCCTAACGTGTTCCTGG-CCACCAAATTAGAAAG-CGTGGTGTACGCGTCGTGG 8684280
Query 13905 AGTCGCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGG 13964
||||| ||||| ||| | | ||||||| || ||| | |||| || || |||
Sbjct 8684279 TCCCGCGTACAGGCGGACTTGAACTGCATGAGAGATCTGCTGGACTCCAAGGTTAAATGG 8684220
Query 13965 AGGTACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTG 14024
| |||| |||| ||| |||||| |||||||| |||| |||||| |||||| |||
Sbjct 8684219 AAGTACATGCTGAACACATGCGGGGCCGACTTCCCCATCAAAACCAACAGGGAGATGGTG 8684160
Query 14025 CGGGCGCTGAAGGCCCTGGGCGGCAAGAACGCCCTGGAGAGCGAGGGCATGCCCAACCAC 14084
| | |||||||| ||||| |||| |||| | ||||| |||| || ||||| |
Sbjct 8684159 CAGACGCTGAAGACCCTGAAGGGCAGGAACAGCATGGAGTCCGAGACCA---CCAACGAG 8684103
Query 14085 AAGCTGCACCGCATCAGGAAGAGGCACGTGGTGGCCAGCGGCGGCGTGGTGGTCAACACC 14144
|| | || || | ||| || || || | | |||| ||| ||
Sbjct 8684102 AACAAAAAGGGCCGGTGGCTGTACCACCACCAGGTCA-CG--GATGAGGTGATCAGAACA 8684046
Query 14145 GGC-AGGAACAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAAACGCTTACTT 14203
| | ||| || ||||| ||||| | | | ||||| || | ||||| || |||||
Sbjct 8684045 GACGTGGAGAAAAGCCCC-CCGCCCATAAAAACGCCCATGTTCTCCGGAAATGCCTACTT 8683987
Query 14204 TGCGGTCACCCGGGAGTTCGTGGACTTCGTCCTCAAGGACGAGCCGGTGGCCCTGCTCAT 14263
| ||| | | |||||| | ||| | | |||| |||| |||| |
Sbjct 8683986 CGTGGTGTCGAGAACTTTCGTGCAACACGTGATGACAGACGCAAAGGTGCAGGAGCTCCT 8683927
Query 14264 GCACTGGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAAT 14323
| | ||| ||||||| ||||| || ||||||||||||||||||||| ||||||| ||
Sbjct 8683926 GGAGTGGGAGAAGGACACCTACAGTCCGGACGAGCACCTGTGGGCCACCCTGCAGAGGAT 8683867
Query 14324 GTACGGGACGCCCGGGGGGATCCCCGTTCACGTCAAGTACGACACCTCGGACATGTGGGC 14383
| | |||||| | ||| || |||||||||||| ||||||||| |||
Sbjct 8683866 GCCCACAGTCCCCGGGTCATTGCCCCACAACAACAAGTACGACACGTCGGACATGCTGGC 8683807
Query 14384 CAAGGTCAGGTTCGTCAAGTGGCACTACTACGAGGGGGAT 14423
| || | | ||||||||| ||||| | ||| |||
Sbjct 8683806 CCTGGCGCGCGTGGTCAAGTGGAGCTACTTGGCGGGTGAT 8683767
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658682918969600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |