Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq9 246 4e-60 >seq9 Length=13922460 Score = 246 bits (272), Expect = 4e-60 Identities = 556/820 (68%), Gaps = 18/820 (2%) Strand=Plus/Minus Query 13610 CTACGTGAACATGACGGCCGACTGCGTGGCCTTCGT-GAAAGACAGGGGGT--ATCTCGT 13666 |||| |||| |||||| ||||||| | | | | |||||| ||||||| ||| || Sbjct 8684574 CTACATGAATGCGACGGCGGACTGCGCTTCTTACATTGAAAGA-AGGGGGTTCATCACG- 8684517 Query 13667 GAGGCCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCA 13726 ||| || |||||| ||| ||| || || |||||||| ||||| || |||||||| | Sbjct 8684516 GAG-CCTCTGAGCGAGGAGGAGAGAGACTTCCCCATCGCTTACTCCATGGTGATCCATGA 8684458 Query 13727 CAAGATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTG 13786 ||| ||||||||||||||||| |||||| ||||||||||| |||| |||||| ||||||| Sbjct 8684457 CAACATCGAGATGTTCGAGCGGCTCCTGCGGGCCATCTACACCCCTCAGAACGTCTACTG 8684398 Query 13787 CGTCCACGTGGACTCCAAGTCCGGCGACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAG 13846 ||| || ||||| || ||| || || |||| || |||| || || Sbjct 8684397 CGTTCATGTGGATCAGAAATCCAAGGATGAATTCAAGGCGGCCGTCGTGGGGATTATTTC 8684338 Query 13847 GTGCTTCCCTAACGTGGCCCTGGCCCACCGGCT--GCACGACGTGGTGTACGGCTCCTGG 13904 ||| ||||||||||| ||||| ||||| | | | | ||||||||||| || ||| Sbjct 8684337 CTGCCTCCCTAACGTGTTCCTGG-CCACCAAATTAGAAAG-CGTGGTGTACGCGTCGTGG 8684280 Query 13905 AGTCGCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGG 13964 ||||| ||||| ||| | | ||||||| || ||| | |||| || || ||| Sbjct 8684279 TCCCGCGTACAGGCGGACTTGAACTGCATGAGAGATCTGCTGGACTCCAAGGTTAAATGG 8684220 Query 13965 AGGTACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTG 14024 | |||| |||| ||| |||||| |||||||| |||| |||||| |||||| ||| Sbjct 8684219 AAGTACATGCTGAACACATGCGGGGCCGACTTCCCCATCAAAACCAACAGGGAGATGGTG 8684160 Query 14025 CGGGCGCTGAAGGCCCTGGGCGGCAAGAACGCCCTGGAGAGCGAGGGCATGCCCAACCAC 14084 | | |||||||| ||||| |||| |||| | ||||| |||| || ||||| | Sbjct 8684159 CAGACGCTGAAGACCCTGAAGGGCAGGAACAGCATGGAGTCCGAGACCA---CCAACGAG 8684103 Query 14085 AAGCTGCACCGCATCAGGAAGAGGCACGTGGTGGCCAGCGGCGGCGTGGTGGTCAACACC 14144 || | || || | ||| || || || | | |||| ||| || Sbjct 8684102 AACAAAAAGGGCCGGTGGCTGTACCACCACCAGGTCA-CG--GATGAGGTGATCAGAACA 8684046 Query 14145 GGC-AGGAACAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAAACGCTTACTT 14203 | | ||| || ||||| ||||| | | | ||||| || | ||||| || ||||| Sbjct 8684045 GACGTGGAGAAAAGCCCC-CCGCCCATAAAAACGCCCATGTTCTCCGGAAATGCCTACTT 8683987 Query 14204 TGCGGTCACCCGGGAGTTCGTGGACTTCGTCCTCAAGGACGAGCCGGTGGCCCTGCTCAT 14263 | ||| | | |||||| | ||| | | |||| |||| |||| | Sbjct 8683986 CGTGGTGTCGAGAACTTTCGTGCAACACGTGATGACAGACGCAAAGGTGCAGGAGCTCCT 8683927 Query 14264 GCACTGGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAAT 14323 | | ||| ||||||| ||||| || ||||||||||||||||||||| ||||||| || Sbjct 8683926 GGAGTGGGAGAAGGACACCTACAGTCCGGACGAGCACCTGTGGGCCACCCTGCAGAGGAT 8683867 Query 14324 GTACGGGACGCCCGGGGGGATCCCCGTTCACGTCAAGTACGACACCTCGGACATGTGGGC 14383 | | |||||| | ||| || |||||||||||| ||||||||| ||| Sbjct 8683866 GCCCACAGTCCCCGGGTCATTGCCCCACAACAACAAGTACGACACGTCGGACATGCTGGC 8683807 Query 14384 CAAGGTCAGGTTCGTCAAGTGGCACTACTACGAGGGGGAT 14423 | || | | ||||||||| ||||| | ||| ||| Sbjct 8683806 CCTGGCGCGCGTGGTCAAGTGGAGCTACTTGGCGGGTGAT 8683767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658682918969600