Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq15 141 8e-29
seq6 82.4 7e-11
>seq15
Length=11516971
Score = 141 bits (156), Expect = 8e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||||||||| ||||| |||||| | || |||||||| ||||| ||
Sbjct 2476973 CATGCAGATCTTTGTAAAAACCCTGACTGGCAAGACCATCACTCTTGAGGTGGAGCCCAG 2476914
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | ||||||| || || || || || ||||| |||||||| || || |||||
Sbjct 2476913 CGACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCA 2476854
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | | || | || ||||| || ||||||| | ||| | ||||| |||||
Sbjct 2476853 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAA 2476794
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||| || |||||||| ||| | || | || ||||| || |||||||
Sbjct 2476793 CATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGTGG 2476746
Score = 141 bits (156), Expect = 8e-29
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||||||||| ||||| |||||| | || |||||||| ||||| ||
Sbjct 2477201 CATGCAGATCTTTGTAAAAACCCTGACTGGCAAGACCATCACTCTTGAGGTGGAGCCCAG 2477142
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | ||||||| || || || || || ||||| |||||||| || || |||||
Sbjct 2477141 CGACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCA 2477082
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | | || | || ||||| || ||||||| | ||| | ||||| |||||
Sbjct 2477081 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAA 2477022
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || |||||||| ||| | || | || ||||| || |||| |||||
Sbjct 2477021 CATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGGGGCAT 2476971
Score = 141 bits (156), Expect = 8e-29
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||||||||| ||||| |||||| | || |||||||| ||||| ||
Sbjct 2477429 CATGCAGATCTTTGTAAAAACCCTGACTGGCAAGACCATCACTCTTGAGGTGGAGCCCAG 2477370
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | ||||||| || || || || || ||||| |||||||| || || |||||
Sbjct 2477369 CGACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCA 2477310
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | | || | || ||||| || ||||||| | ||| | ||||| |||||
Sbjct 2477309 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAA 2477250
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || |||||||| ||| | || | || ||||| || |||| |||||
Sbjct 2477249 CATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGGGGCAT 2477199
Score = 138 bits (152), Expect = 1e-27
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||||||||| ||||| |||||| | || |||||||| ||||| ||
Sbjct 2477657 CATGCAGATCTTTGTAAAAACCCTGACTGGCAAGACCATCACTCTTGAGGTGGAGCCCAG 2477598
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | ||||||| || || || || || ||||| |||||||| || || |||||
Sbjct 2477597 TGACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCA 2477538
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | | || | || ||||| || ||||||| | ||| | ||||| |||||
Sbjct 2477537 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAA 2477478
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || |||||||| ||| | || | || ||||| || |||| |||||
Sbjct 2477477 CATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGGGGCAT 2477427
>seq6
Length=9412079
Score = 82.4 bits (90), Expect = 7e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||||||||| || || ||||| | |||| | || | ||| | ||||||||
Sbjct 6657186 ATGCAGATATTTGTGAAGACCCTGACTGACAAGACCATCAGTCTGAATGTGGAACCCAAT 6657245
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| |||| || |||| || || || || || || || || || || |||||
Sbjct 6657246 GACAGCATTGTGAATATCAAGGTCAAGATCCATGATAAGGAGGGGATCCCTCCTGATCAG 6657305
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | || ||||| || || | ||| | ||| | || || ||||||
Sbjct 6657306 CAGCGTCTCATCTTTGCTGGCAAGCAGCTGCAGGACGGCCACACCCTCTCTGACTACAAC 6657365
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || ||||||| ||| | || | || | |||||| ||||| ||
Sbjct 6657366 ATCCAGAAGGAGTTCACCCTCCACCTTGTGCTCCGTTTGTCCGGTGGTAT 6657415
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434881241659200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |