Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq10 102 7e-17 >seq10 Length=9126174 Score = 102 bits (112), Expect = 7e-17 Identities = 115/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 34293 CCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTC 34352 |||| || |||| |||||||| || || ||||| ||||| || |||| ||| Sbjct 6095993 CCACAAATGCCAAAGAGCTCTCAGAGAAAGGAGTAAAGATTTGGGAAGCCAACGGTTCTA 6096052 Query 34353 GAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCT 34412 | | ||||||||||| | |||| || | || |||||||| || ||||||| || | Sbjct 6096053 GGGCTTTTCTGGACAATCTGGGGCTCACCGACCGAGAGGAGGGAGATCTGGGCCCTGTGT 6096112 Query 34413 ACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446 |||||||||||||||| |||||||| || ||||| Sbjct 6096113 ACGGGTTCCAGTGGAGGCACTTTGGTGCCGAGTA 6096146 Score = 102 bits (112), Expect = 7e-17 Identities = 115/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 ||||| || |||||||| ||||||||||||||||| || ||||||| || |||||||| Sbjct 6096146 TACTCGGCACCAAAGTGCCTCCACTGGAACCCGTACACAGGGCCCAGATCTCCCTCCTCT 6096087 Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018 || | || |||| | ||||||||||| | | ||| |||| || ||||| ||||| Sbjct 6096086 CGGTCGGTGAGCCCCAGATTGTCCAGAAAAGCCCTAGAACCGTTGGCTTCCCAAATCTTT 6096027 Query 7019 ACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGG 7052 || || |||||||| |||| || |||| Sbjct 6096026 ACTCCTTTCTCTGAGAGCTCTTTGGCATTTGTGG 6095993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448224101581200