Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq15 181 2e-40
seq6 113 1e-19
seq14 98.7 2e-15
seq20 86.0 1e-11
>seq15
Length=11516971
Score = 181 bits (200), Expect = 2e-40
Identities = 169/215 (79%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||||||||| || |||||||| || |||||||| || || | ||||| | ||||||
Sbjct 2477445 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 2477504
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| || ||||| || | || || ||||| |||| ||||||||||||
Sbjct 2477505 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCC 2477564
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||||| || || ||||||||| | || ||||| |||||||| |||
Sbjct 2477565 TGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCAAGAGTGATGGTC 2477624
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| || || || || |||||||| | |||||| ||
Sbjct 2477625 TTGCCAGTCAGGGTTTTTACAAAGATCTGCATGTT 2477659
Score = 179 bits (198), Expect = 9e-40
Identities = 167/212 (79%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||||||||| || |||||||| || |||||||| || || | ||||| | ||||||
Sbjct 2476761 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 2476820
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| || ||||| || | || || ||||| |||| ||||||||||||
Sbjct 2476821 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCC 2476880
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| |||||||| || |||||||| | || ||||| |||||||| |||
Sbjct 2476881 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTC 2476940
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || || |||||||| | ||||||
Sbjct 2476941 TTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 2476972
Score = 179 bits (198), Expect = 9e-40
Identities = 167/212 (79%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||||||||| || |||||||| || |||||||| || || | ||||| | ||||||
Sbjct 2476989 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 2477048
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| || ||||| || | || || ||||| |||| ||||||||||||
Sbjct 2477049 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCC 2477108
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| |||||||| || |||||||| | || ||||| |||||||| |||
Sbjct 2477109 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTC 2477168
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || || |||||||| | ||||||
Sbjct 2477169 TTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 2477200
Score = 179 bits (198), Expect = 9e-40
Identities = 167/212 (79%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||||||||| || |||||||| || |||||||| || || | ||||| | ||||||
Sbjct 2477217 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 2477276
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| || ||||| || | || || ||||| |||| ||||||||||||
Sbjct 2477277 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCC 2477336
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| |||||||| || |||||||| | || ||||| |||||||| |||
Sbjct 2477337 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTC 2477396
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || || |||||||| | ||||||
Sbjct 2477397 TTGCCAGTCAGGGTTTTTACAAAGATCTGCAT 2477428
>seq6
Length=9412079
Score = 113 bits (124), Expect = 1e-19
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| |||||||| || ||| |||| || |||||||| || || | ||||| || ||
Sbjct 6657397 AGCACAAGGTGGAGGGTGAACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGTGGCCGTCC 6657338
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
| |||||||||||| || ||||| || || || || |||||||| | || ||||| ||
Sbjct 6657337 TGCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGATCAGGAGGGATCCCCTCCTTATCA 6657278
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || | || | ||| ||||| | ||| || | ||| |||| |||
Sbjct 6657277 TGGATCTTGACCTTGATATTCACAATGCTGTCATTGGGTTCCACATTCAGACTGATGGTC 6657218
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| | || || ||||| ||||| | ||||||
Sbjct 6657217 TTGTCAGTCAGGGTCTTCACAAATATCTGCAT 6657186
Score = 98.7 bits (108), Expect = 2e-15
Identities = 151/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| |||||||| || ||||| || || |||||||| || || | |||| | || ||
Sbjct 6656941 AGCACAAGGTGGAGGGTGGATTCATTCTGGATGTTGTAGTCAGAGAGGGAGCACCCGTCC 6656882
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || || |||| || | || ||||||||||| | || ||||| |||
Sbjct 6656881 TCAAGCTGCTTACCAGCATAGATCAGACACTGCTGGTCAGGAGGGATCCCCTCCTTATCC 6656822
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCA-GAGCTTTCAACCTCGAGAGTGATCGT 211081
|||| | ||| || || || ||| ||||| | | ||| ||| |||||||| ||
Sbjct 6656821 CAGATCATGGATTTGACATTCTCAATGCTGTCATTTGGTCTCACTCTC-AGAGTGATGGT 6656763
Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||| || || | ||| | ||||| | || |||
Sbjct 6656762 CTTGCCAGTCTGGGTCCTCACAAATATCTTCAT 6656730
Score = 86.0 bits (94), Expect = 1e-11
Identities = 143/207 (69%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 210908 AAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAG 210967
|||||| | |||||||| || |||||||| || | ||| | | |||||| |||||
Sbjct 6656707 AAGGTGGATGGTGGACTCCTTCTGGATGTTGTAGGTGGAGAGGTTGCCTCCATCCTCCAG 6656648
Query 210968 CTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGAT 211027
|||||| || ||||| || || || || |||||| | ||| ||||| || |||
Sbjct 6656647 CTGCTTAGTAGCAAAGATCAGACGCTGCAGGAAAGGAGGGATTCCCTCCTTATCGCAGAT 6656588
Query 211028 CTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCC 211087
||| || || || || ||| | ||| ||| ||||| | ||||| ||||| ||
Sbjct 6656587 CTTGGCCTTGACATTCTCAATGCTTTCATTTGGTTCCACCTCCACGGTGATGGTCTTGCC 6656528
Query 211088 CGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| ||||| | ||||||
Sbjct 6656527 AATGTAGGTCTTCACAAAGATCTGCAT 6656501
>seq14
Length=12328026
Score = 98.7 bits (108), Expect = 2e-15
Identities = 142/194 (73%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 139822 GGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTCGAAAGGAAAAGAGGCACAAC 139881
|| ||||||||||| ||||| |||||||||| |||| ||| ||| ||||| ||||||
Sbjct 3877777 GGCAGAGGAGGACAGTCTGCCCTGCGTTTTGCTCGACTGAGAATGGAGAAGAGACACAAC 3877718
Query 139882 TACTTGAGAAAAGTTGCAGAGAACGCAATACAG-TGTTT-TAT-CAAAGACAACAAGTGT 139938
|| |||| ||||| || |||| || | ||| ||||| | | ||| || | |||| |
Sbjct 3877717 TATGTGAGGAAAGTGGCTGAGACGGCTGTCCAGCTGTTTGTGTCCAACGATA--AAGT-T 3877661
Query 139939 TTTGTTTCTGGTATTGTTTTGGCAGGTTCCGCAGAGTTCAAGACAAAGCTCCTGGAATCT 139998
||| | || || || ||||| ||||| || || |||||||| ||||| | |||
Sbjct 3877660 AATGTGGCCGGAATGGTCTTGGCTGGTTCTGCCGACTTCAAGACCGAGCTCAGCCAGTCT 3877601
Query 139999 GACTTTTTTGACCC 140012
||| | ||||| ||
Sbjct 3877600 GACATGTTTGATCC 3877587
>seq20
Length=13411851
Score = 86.0 bits (94), Expect = 1e-11
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070
|||||||| |||||||||||| || || |||||||| ||||| | || ||||||
Sbjct 10779675 CCTTCCTTATCCTGGATCTTTGCCTTGACATTTTCGATCGTGTCGCTGGGCTCCACCTCG 10779734
Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| ||||| ||||||||||| | ||||| || || | |||||| ||
Sbjct 10779735 AGGGTGATGGTCTTTCCCGTCAACGTCTTCACGAAGATCTGCATGTT 10779781
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159050489074775
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