Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq10 149 5e-31 seq45 98.7 8e-16 >seq10 Length=9126174 Score = 149 bits (164), Expect = 5e-31 Identities = 130/162 (80%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773 || || |||| || || |||||||| || || || | |||||||||||||| |||||| Sbjct 6096601 AGTCCTGTGATATGTGCAATCATGTAGGTCAGAAGTGCATAGCTGGCGATGTTGAAGGGC 6096542 Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833 |||||||| ||||| ||||| || | |||||| ||||||||||| ||||| ||||| | | Sbjct 6096541 ACCCCGAGGCCCATATCCCCCGAGCGCTGGTACAGCTGGCACGACAGCTCGCCGTCACAC 6096482 Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATG 29875 ||||| ||||| |||| || ||||| || || || |||||| Sbjct 6096481 ACGTAGAACTGGCACAGAGCGTGGCAGGGTGGCAGAGCCATG 6096440 Score = 132 bits (146), Expect = 4e-26 Identities = 117/146 (80%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 || ||||||||||||||||||||||| || ||||| |||||||| || | || || Sbjct 6096134 AAGTGCCTCCACTGGAACCCGTACACAGGGCCCAGATCTCCCTCCTCTCGGTCGGTGAGC 6096075 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 ||| ||||||| ||| | || ||||||||||| ||||| |||||||| || ||||| Sbjct 6096074 CCCAGATTGTCCAGAAAAGCCCTAGAACCGTTGGCTTCCCAAATCTTTACTCCTTTCTCT 6096015 Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCC 30162 ||||||||||||| |||||||| || Sbjct 6096014 GAGAGCTCTTTGGCATTTGTGGATCC 6095989 >seq45 Length=142330 Score = 98.7 bits (108), Expect = 8e-16 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 114293 CTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGAGAAC 114352 |||||||| || | ||| | ||||| |||||||| || |||| |||||||||||| Sbjct 135684 CTGCTGAGAACGATGTTGATCCTGTTGGCCAGAGGTCGGTTTCTTTCTGGGATGGAGAAC 135625 Query 114353 CAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391 || |||||||| ||||| ||||||||||||||||| ||| Sbjct 135624 CAGGTCTTTCTGCCCATGATCACCACGTTCTGCTTCCCT 135586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406129365970810