Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq10 150 1e-31 >seq10 Length=9126174 Score = 150 bits (166), Expect = 1e-31 Identities = 134/168 (80%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 ||||| ||||||||| || || || |||||||| |||||||||||||| || ||||| || Sbjct 6096156 CATGTTCGTGTACTCGGCACCAAAGTGCCTCCACTGGAACCCGTACACAGGGCCCAGATC 6096097 Query 27549 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 27608 |||||| || | || || ||| ||||||| ||| | || ||||||||||| || Sbjct 6096096 TCCCTCCTCTCGGTCGGTGAGCCCCAGATTGTCCAGAAAAGCCCTAGAACCGTTGGCTTC 6096037 Query 27609 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656 ||| |||||||| || ||||| ||||||||||||| |||||||| || Sbjct 6096036 CCAAATCTTTACTCCTTTCTCTGAGAGCTCTTTGGCATTTGTGGATCC 6095989 Score = 140 bits (154), Expect = 2e-28 Identities = 128/162 (79%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 || || |||| || || |||||||| || || || | |||||||||||||| ||||| Sbjct 6096601 AGTCCTGTGATATGTGCAATCATGTAGGTCAGAAGTGCATAGCTGGCGATGTTGAAGGGC 6096542 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327 |||||||| ||||| |||||||| | |||||| ||||| ||||| ||||| || || | Sbjct 6096541 ACCCCGAGGCCCATATCCCCCGAGCGCTGGTACAGCTGGCACGACAGCTCGCCGTCACAC 6096482 Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATG 27369 ||||| ||||| || | |||||||| || || ||||||||| Sbjct 6096481 ACGTAGAACTGGCACAGAGCGTGGCAGGGTGGCAGAGCCATG 6096440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369476419472885