Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq11 562 4e-155
seq15 109 8e-19
>seq11
Length=11238946
Score = 562 bits (622), Expect = 4e-155
Identities = 1310/1964 (67%), Gaps = 25/1964 (1%)
Strand=Plus/Plus
Query 77059 TATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGAT 77118
|||| || || || || |||||||| |||||| || | || | ||||| ||||| |
Sbjct 5178229 TATTTTTCATGTCCTCGTTCCACAACCCCCTCTCCGTCAGGTCTTTGAGGAGGTGAGGGT 5178288
Query 77119 TAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTT 77178
| || || || || || || |||| || || || ||||| || || ||||| || | ||
Sbjct 5178289 TGACAATCTGGAACTCCCCGGACAGGACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCTT 5178348
Query 77179 CCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCA 77238
| | ||| || ||||| |||| || || || || || || || ||||| || || | |
Sbjct 5178349 CGATAGACTCGTTGTTGCCCAGGATCTGGGCGGTTGAGGCGGTGGGCATCGGGGCTAAGA 5178408
Query 77239 ATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAA 77298
| ||| || || | || || | |||||| || ||||| ||||| ||| | |
Sbjct 5178409 GCAGACTGTTCCTCACGCCGTGCTTGGCGATTTTTTCCTTTAGCAGCTTCCAGTCCAACA 5178468
Query 77299 GATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATC 77358
| || | || ||||| | ||||| || || || || || || | || |
Sbjct 5178469 GGTCGGTGGGCGTCTTCTCCCACATGTCGTACTGAAGGATGCCCTTGCTGACCGGGGAGC 5178528
Query 77359 CATTATATGTTTCATAAGGTCCT---TCTGTTTCAGCTAGTTCACAACTCGCTTCCAATG 77415
| | || ||||| || || || || | |||| || || || ||||| || | |
Sbjct 5178529 CTTCGTAGGTTTCGTATGGCCCGAGCTCGG---CAGCCAGCTCGCAGCTCGCCTCGAGGG 5178585
Query 77416 CTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAA 77475
|| |||| || || || ||||| |||| | || ||| || ||||| || || |
Sbjct 5178586 CTGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAGAAGCTGAGCTTCGGGGCTTTCGA 5178645
Query 77476 ACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTC 77535
|||| ||| | | || || || || || || || ||||| || || || || || || |
Sbjct 5178646 ACGGGTAACGCATGAGGATGAATGCGTCGGCCAAACCCTGGACACCGATTCCTATTGGCC 5178705
Query 77536 TATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTT 77595
| || | ||| ||||| | | |||||| || | ||||| |||||||| ||||| || |
Sbjct 5178706 TGTGGCGCTTGTTGGACTTCTCAGCTTCGGGCACTGGATAGTAATTAATATCTATGATCT 5178765
Query 77596 TATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTC 77655
| || | ||| | |||||||| || ||| | |||||| |||| ||||| | |
Sbjct 5178766 TGTTCAAGTTTTTGACAACTACCTTGGTCACAGCAGCTAGTTTTTGAAAGTCAAAAGTCC 5178825
Query 77656 ---CATCTATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCAT 77712
|| | | || ||||||| | || | || || ||||||||||| |||||||| |
Sbjct 5178826 GCTCAGCGGTGACGTACATGTTGAGTGCGACGGAGGCCAGATTACAAACCGCTACCTCGT 5178885
Query 77713 TAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGAT 77772
| ||| |||| | || || || |||||||| || | ||||| ||||||||||
Sbjct 5178886 CGCTGCTGGTGTATTCCACAATTTCTGTGCATAGATTGCTGCTCTTGATGGTGCCCAGAT 5178945
Query 77773 TTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTT 77832
| || ||||||||||| ||||||| | || || || || || | ||||| |||||||
Sbjct 5178946 TCTGCTGGTTGCTCTTCCTATTGCAGGCATCTTTGTAGAGCATGTATGGAGTGCCGGTTT 5179005
Query 77833 CAATCTGTGATTCGATAATAGATTTCCAGACGACT-CT-AGCTTTTATCATAGATTTGTA 77890
|| |||| || || || || | | ||| || || || || || | || | |||
Sbjct 5179006 CAGTCTGGGACTCTATGATGGCATGCCAAAC--CTGCTGGGCCTTCACCACACGCTTGAC 5179063
Query 77891 TCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATC 77950
|| | ||| | || |||| || || ||| ||||| || || ||||| ||||
Sbjct 5179064 GCGGCCTTCTTTCTCGTATTTGGTGTAGAGCTTCTCAAACTCCTCCCCCCAGCACTCATT 5179123
Query 77951 CAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTT 78010
|| || || ||||| | ||| ||||| | |||||||| | || || | ||
Sbjct 5179124 CAGCCCGGGACATTCGTCTGGACACATTAGAGACCAGTCCTGGTTACTCTCCACCCTCTT 5179183
Query 78011 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATT 78070
||| || | ||||| ||||| | | | || || |||| || ||| || || || ||
Sbjct 5179184 CATGAACAAGTCAGGGATCCACATACCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCTTT 5179243
Query 78071 TCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATA 78130
||| || ||||| || | || || || || | ||||| |||||||| ||||| || ||
Sbjct 5179244 TCCAGTGTTCTTCTTCAACTCCAGGAAGTCAAATATATCGGAATGCCAGGGTTCCAGGTA 5179303
Query 78131 TATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATT 78190
|| || | | | ||||| | || || || ||||| || | ||| | |||||||| ||
Sbjct 5179304 CATGGCGAAAGCCCCAGGCCTCTTGTTTCCACCCTGGTCCACATAGCGTGCGGTGTTGTT 5179363
Query 78191 ATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACT 78250
|||||||||| ||| || | || || || || | ||||| || |||| || |||||
Sbjct 5179364 GTAAACTCTCAGCATGGGGACAAGCCCATTGGAGTTGCCATTGGTGCCAGCGATGTAACT 5179423
Query 78251 TCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAG 78310
||| | | | || || | || | || |||||||| ||| ||| || || ||
Sbjct 5179424 TCCCGTAGATCTGATGCAGCTGACGGCCACACCGATTCCTCCAGCCGACTTGGAGATGAG 5179483
Query 78311 AGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAG 78370
||||| |||||| || || || || ||||| || ||||||||| ||||| || ||
Sbjct 5179484 CGCGCACTGTTTCAGCGTGTCATAAATGCCCTCGATGCTGTCATCCTTCATGGCGAGCAG 5179543
Query 78371 AAAACAGCTAGACATTTG----ATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATG 78426
|| ||||| |||| || || || || ||||||||||| | |||||| || |
Sbjct 5179544 GAAGCAGCTGGACAGCTGTGGCCTGTTG----GTACCTGCATTAAAGAGTGTCGGGGAGG 5179599
Query 78427 CATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCC 78486
|||| || ||||| || || || || || ||||| |||||||| |||| || || ||
Sbjct 5179600 CATGGGTGAACCACTTCTCTGACAGCAGGTTGTAGGTTTCAATCGCTGCATCAATATCTG 5179659
Query 78487 ATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTAT 78546
|||||| || || || | || | ||| | ||| ||||| |||| || || ||
Sbjct 5179660 TTTGATGGATCCCCACAGAAACCCTCATGAGCATGTGCTGCGGTCGCTCGGCCACTTTGC 5179719
Query 78547 TATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAA 78606
|| || ||||||| ||| || |||| |||||||| || || | ||||||||||
Sbjct 5179720 CGTTGATCTTCAACAGGTAGGACCGCTCCAGGGTTTTAAAGCCGAAGAAATTGTATGAAA 5179779
Query 78607 AGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATATCCA 78666
| || | || || || || | || || || ||||||| | | || || | ||
Sbjct 5179780 AATCACGGTCATATATTATGGCCGAGTTCAGGCGGTCTTTGTTCTGGAGGACGATGT-CA 5179838
Query 78667 TGACAGTAGTT-GAAATAATAGGAGATCGTACAC-CATTTTTAGGATTAACATAGTTAAA 78724
| | || || | || ||||| | || | |||| || || | ||||| |
Sbjct 5179839 AGCGTCTCCTTGGAGACCATGGGAGAGTG-ACGCTTATTTAGTGGGTTTATGTAGTTGTA 5179897
Query 78725 TAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGC 78784
| || ||||| || ||||| || | || ||||| |||||||| || || || || ||
Sbjct 5179898 CAGGTCCTCCATCACGTCACTGAACACCTTCTTTGTCTCCTTGTGCAGGTTTGAGACGGC 5179957
Query 78785 TATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTC 78844
|| | |||||| || || || || ||||| |||| || || ||| || | || ||
Sbjct 5179958 GATCCGTGCAGCGAGGATGGCGTAGTCAGGGTGTTTGGTGGTCAGAGTAGCAGAGATCTC 5180017
Query 78845 TGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACTTT 78904
||| || || | || | ||| | || ||||| ||||| || | || || || || ||
Sbjct 5180018 TGCTGCCAAGGTGTCGAGCTCCACCGTGGTGACTCCATTGTACAAACCCTGGATCACCTT 5180077
Query 78905 CATGGCGATTTTGACAGGATCTACAAACTCAGTGTTCAATCCATAACATAATTTTCTAAT 78964
||||| || | | | || || ||||| |||| ||| | || || || | || ||
Sbjct 5180078 CATGGTAATCTGGGCTGGGTCCACAAAGTCAGCGTTTAGGCCGTAGCACAGCTTCTGGAT 5180137
Query 78965 ACGAGATGTGATTTTATCAAATATAACATTCTCCTTGCATCCAT 79008
||||| ||||||||||| || || || ||||| || |||||
Sbjct 5180138 GCGAGAGGTGATTTTATCGAACATGACGCGCTCCTGGCGTCCAT 5180181
>seq15
Length=11516971
Score = 109 bits (120), Expect = 8e-19
Identities = 144/199 (72%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 78715 CATAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGAT 78774
|| || || ||||| | | |||| ||||||| | ||| || || || ||||||||||
Sbjct 9314569 CACAGCTATATAAAGCCTGTCTTAC--CACTAAAGACTTTCTTGGTCTCTTTGTGTAGAT 9314626
Query 78775 TAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGG 78834
| || || || || | |||||| || || ||||||||||||| || || ||| |||||
Sbjct 9314627 TGGACACGGCGATCCGTGCAGCCAGGATGGCATAATCAGGATATTTGGTGGTAAGAGTGG 9314686
Query 78835 CTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTCCTT 78894
|||| | ||||| || | | | || | ||| | || ||||| ||| | || || || |
Sbjct 9314687 CTGCAGTCTCTGCTGCCAGAGTGTCCAGCTCCACTGTGGTGACTCCACTGTACAGGCCCT 9314746
Query 78895 GAATAACTTTCATGGCGAT 78913
| || || ||||||| |||
Sbjct 9314747 GGATCACCTTCATGGTGAT 9314765
Score = 87.8 bits (96), Expect = 2e-12
Identities = 108/148 (73%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062
||||||||||||||||| || || ||||| | ||| | || ||||||| || || ||
Sbjct 9313263 ACTCGTTTCATAAAGAGGTCTGGGATCCACAAAGCGAAGAACAGATCTCTGGCCCTCTGC 9313322
Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122
|| || || || || |||||||| || || || ||| | | | ||| |||||||| ||
Sbjct 9313323 TCCTCTTTGCCAGTGTTCTTTTTCAGCTCCAGGAACGCAAACACATCGGAATGCCACGGC 9313382
Query 78123 TCTAGATATATTGCCATAACTCCAGGTC 78150
|| || || | || | |||||||||
Sbjct 9313383 TCCAGGTACACAGCAAAGGCTCCAGGTC 9313410
Score = 84.2 bits (92), Expect = 3e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 77733 ATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTA 77792
||||| || || ||||| || ||||||| |||||||| || || ||||||||||| |
Sbjct 9312841 ATCTCTGTGCACAGATTGCTGGATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTG 9312900
Query 77793 TTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAAT 77851
||||| | |||||| || || || | || || |||||||| | || || ||||| ||
Sbjct 9312901 TTGCAGGCGTCCTTGTAGAGCATGTATGGTGTGCCGGTTTCTGTTTGAGACTCGATGAT 9312959
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694609449234400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |