Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq11 562 4e-155 seq15 109 8e-19 >seq11 Length=11238946 Score = 562 bits (622), Expect = 4e-155 Identities = 1310/1964 (67%), Gaps = 25/1964 (1%) Strand=Plus/Plus Query 77059 TATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGAT 77118 |||| || || || || |||||||| |||||| || | || | ||||| ||||| | Sbjct 5178229 TATTTTTCATGTCCTCGTTCCACAACCCCCTCTCCGTCAGGTCTTTGAGGAGGTGAGGGT 5178288 Query 77119 TAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTT 77178 | || || || || || || |||| || || || ||||| || || ||||| || | || Sbjct 5178289 TGACAATCTGGAACTCCCCGGACAGGACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCTT 5178348 Query 77179 CCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCA 77238 | | ||| || ||||| |||| || || || || || || || ||||| || || | | Sbjct 5178349 CGATAGACTCGTTGTTGCCCAGGATCTGGGCGGTTGAGGCGGTGGGCATCGGGGCTAAGA 5178408 Query 77239 ATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAA 77298 | ||| || || | || || | |||||| || ||||| ||||| ||| | | Sbjct 5178409 GCAGACTGTTCCTCACGCCGTGCTTGGCGATTTTTTCCTTTAGCAGCTTCCAGTCCAACA 5178468 Query 77299 GATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATC 77358 | || | || ||||| | ||||| || || || || || || | || | Sbjct 5178469 GGTCGGTGGGCGTCTTCTCCCACATGTCGTACTGAAGGATGCCCTTGCTGACCGGGGAGC 5178528 Query 77359 CATTATATGTTTCATAAGGTCCT---TCTGTTTCAGCTAGTTCACAACTCGCTTCCAATG 77415 | | || ||||| || || || || | |||| || || || ||||| || | | Sbjct 5178529 CTTCGTAGGTTTCGTATGGCCCGAGCTCGG---CAGCCAGCTCGCAGCTCGCCTCGAGGG 5178585 Query 77416 CTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAA 77475 || |||| || || || ||||| |||| | || ||| || ||||| || || | Sbjct 5178586 CTGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAGAAGCTGAGCTTCGGGGCTTTCGA 5178645 Query 77476 ACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTC 77535 |||| ||| | | || || || || || || || ||||| || || || || || || | Sbjct 5178646 ACGGGTAACGCATGAGGATGAATGCGTCGGCCAAACCCTGGACACCGATTCCTATTGGCC 5178705 Query 77536 TATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTT 77595 | || | ||| ||||| | | |||||| || | ||||| |||||||| ||||| || | Sbjct 5178706 TGTGGCGCTTGTTGGACTTCTCAGCTTCGGGCACTGGATAGTAATTAATATCTATGATCT 5178765 Query 77596 TATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTC 77655 | || | ||| | |||||||| || ||| | |||||| |||| ||||| | | Sbjct 5178766 TGTTCAAGTTTTTGACAACTACCTTGGTCACAGCAGCTAGTTTTTGAAAGTCAAAAGTCC 5178825 Query 77656 ---CATCTATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCAT 77712 || | | || ||||||| | || | || || ||||||||||| |||||||| | Sbjct 5178826 GCTCAGCGGTGACGTACATGTTGAGTGCGACGGAGGCCAGATTACAAACCGCTACCTCGT 5178885 Query 77713 TAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGAT 77772 | ||| |||| | || || || |||||||| || | ||||| |||||||||| Sbjct 5178886 CGCTGCTGGTGTATTCCACAATTTCTGTGCATAGATTGCTGCTCTTGATGGTGCCCAGAT 5178945 Query 77773 TTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTT 77832 | || ||||||||||| ||||||| | || || || || || | ||||| ||||||| Sbjct 5178946 TCTGCTGGTTGCTCTTCCTATTGCAGGCATCTTTGTAGAGCATGTATGGAGTGCCGGTTT 5179005 Query 77833 CAATCTGTGATTCGATAATAGATTTCCAGACGACT-CT-AGCTTTTATCATAGATTTGTA 77890 || |||| || || || || | | ||| || || || || || | || | ||| Sbjct 5179006 CAGTCTGGGACTCTATGATGGCATGCCAAAC--CTGCTGGGCCTTCACCACACGCTTGAC 5179063 Query 77891 TCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATC 77950 || | ||| | || |||| || || ||| ||||| || || ||||| |||| Sbjct 5179064 GCGGCCTTCTTTCTCGTATTTGGTGTAGAGCTTCTCAAACTCCTCCCCCCAGCACTCATT 5179123 Query 77951 CAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTT 78010 || || || ||||| | ||| ||||| | |||||||| | || || | || Sbjct 5179124 CAGCCCGGGACATTCGTCTGGACACATTAGAGACCAGTCCTGGTTACTCTCCACCCTCTT 5179183 Query 78011 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATT 78070 ||| || | ||||| ||||| | | | || || |||| || ||| || || || || Sbjct 5179184 CATGAACAAGTCAGGGATCCACATACCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCTTT 5179243 Query 78071 TCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATA 78130 ||| || ||||| || | || || || || | ||||| |||||||| ||||| || || Sbjct 5179244 TCCAGTGTTCTTCTTCAACTCCAGGAAGTCAAATATATCGGAATGCCAGGGTTCCAGGTA 5179303 Query 78131 TATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATT 78190 || || | | | ||||| | || || || ||||| || | ||| | |||||||| || Sbjct 5179304 CATGGCGAAAGCCCCAGGCCTCTTGTTTCCACCCTGGTCCACATAGCGTGCGGTGTTGTT 5179363 Query 78191 ATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACT 78250 |||||||||| ||| || | || || || || | ||||| || |||| || ||||| Sbjct 5179364 GTAAACTCTCAGCATGGGGACAAGCCCATTGGAGTTGCCATTGGTGCCAGCGATGTAACT 5179423 Query 78251 TCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAG 78310 ||| | | | || || | || | || |||||||| ||| ||| || || || Sbjct 5179424 TCCCGTAGATCTGATGCAGCTGACGGCCACACCGATTCCTCCAGCCGACTTGGAGATGAG 5179483 Query 78311 AGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAG 78370 ||||| |||||| || || || || ||||| || ||||||||| ||||| || || Sbjct 5179484 CGCGCACTGTTTCAGCGTGTCATAAATGCCCTCGATGCTGTCATCCTTCATGGCGAGCAG 5179543 Query 78371 AAAACAGCTAGACATTTG----ATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATG 78426 || ||||| |||| || || || || ||||||||||| | |||||| || | Sbjct 5179544 GAAGCAGCTGGACAGCTGTGGCCTGTTG----GTACCTGCATTAAAGAGTGTCGGGGAGG 5179599 Query 78427 CATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCC 78486 |||| || ||||| || || || || || ||||| |||||||| |||| || || || Sbjct 5179600 CATGGGTGAACCACTTCTCTGACAGCAGGTTGTAGGTTTCAATCGCTGCATCAATATCTG 5179659 Query 78487 ATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTAT 78546 |||||| || || || | || | ||| | ||| ||||| |||| || || || Sbjct 5179660 TTTGATGGATCCCCACAGAAACCCTCATGAGCATGTGCTGCGGTCGCTCGGCCACTTTGC 5179719 Query 78547 TATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAA 78606 || || ||||||| ||| || |||| |||||||| || || | |||||||||| Sbjct 5179720 CGTTGATCTTCAACAGGTAGGACCGCTCCAGGGTTTTAAAGCCGAAGAAATTGTATGAAA 5179779 Query 78607 AGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATATCCA 78666 | || | || || || || | || || || ||||||| | | || || | || Sbjct 5179780 AATCACGGTCATATATTATGGCCGAGTTCAGGCGGTCTTTGTTCTGGAGGACGATGT-CA 5179838 Query 78667 TGACAGTAGTT-GAAATAATAGGAGATCGTACAC-CATTTTTAGGATTAACATAGTTAAA 78724 | | || || | || ||||| | || | |||| || || | ||||| | Sbjct 5179839 AGCGTCTCCTTGGAGACCATGGGAGAGTG-ACGCTTATTTAGTGGGTTTATGTAGTTGTA 5179897 Query 78725 TAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGC 78784 | || ||||| || ||||| || | || ||||| |||||||| || || || || || Sbjct 5179898 CAGGTCCTCCATCACGTCACTGAACACCTTCTTTGTCTCCTTGTGCAGGTTTGAGACGGC 5179957 Query 78785 TATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTC 78844 || | |||||| || || || || ||||| |||| || || ||| || | || || Sbjct 5179958 GATCCGTGCAGCGAGGATGGCGTAGTCAGGGTGTTTGGTGGTCAGAGTAGCAGAGATCTC 5180017 Query 78845 TGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACTTT 78904 ||| || || | || | ||| | || ||||| ||||| || | || || || || || Sbjct 5180018 TGCTGCCAAGGTGTCGAGCTCCACCGTGGTGACTCCATTGTACAAACCCTGGATCACCTT 5180077 Query 78905 CATGGCGATTTTGACAGGATCTACAAACTCAGTGTTCAATCCATAACATAATTTTCTAAT 78964 ||||| || | | | || || ||||| |||| ||| | || || || | || || Sbjct 5180078 CATGGTAATCTGGGCTGGGTCCACAAAGTCAGCGTTTAGGCCGTAGCACAGCTTCTGGAT 5180137 Query 78965 ACGAGATGTGATTTTATCAAATATAACATTCTCCTTGCATCCAT 79008 ||||| ||||||||||| || || || ||||| || ||||| Sbjct 5180138 GCGAGAGGTGATTTTATCGAACATGACGCGCTCCTGGCGTCCAT 5180181 >seq15 Length=11516971 Score = 109 bits (120), Expect = 8e-19 Identities = 144/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 78715 CATAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGAT 78774 || || || ||||| | | |||| ||||||| | ||| || || || |||||||||| Sbjct 9314569 CACAGCTATATAAAGCCTGTCTTAC--CACTAAAGACTTTCTTGGTCTCTTTGTGTAGAT 9314626 Query 78775 TAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGG 78834 | || || || || | |||||| || || ||||||||||||| || || ||| ||||| Sbjct 9314627 TGGACACGGCGATCCGTGCAGCCAGGATGGCATAATCAGGATATTTGGTGGTAAGAGTGG 9314686 Query 78835 CTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTCCTT 78894 |||| | ||||| || | | | || | ||| | || ||||| ||| | || || || | Sbjct 9314687 CTGCAGTCTCTGCTGCCAGAGTGTCCAGCTCCACTGTGGTGACTCCACTGTACAGGCCCT 9314746 Query 78895 GAATAACTTTCATGGCGAT 78913 | || || ||||||| ||| Sbjct 9314747 GGATCACCTTCATGGTGAT 9314765 Score = 87.8 bits (96), Expect = 2e-12 Identities = 108/148 (73%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062 ||||||||||||||||| || || ||||| | ||| | || ||||||| || || || Sbjct 9313263 ACTCGTTTCATAAAGAGGTCTGGGATCCACAAAGCGAAGAACAGATCTCTGGCCCTCTGC 9313322 Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122 || || || || || |||||||| || || || ||| | | | ||| |||||||| || Sbjct 9313323 TCCTCTTTGCCAGTGTTCTTTTTCAGCTCCAGGAACGCAAACACATCGGAATGCCACGGC 9313382 Query 78123 TCTAGATATATTGCCATAACTCCAGGTC 78150 || || || | || | ||||||||| Sbjct 9313383 TCCAGGTACACAGCAAAGGCTCCAGGTC 9313410 Score = 84.2 bits (92), Expect = 3e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 77733 ATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTA 77792 ||||| || || ||||| || ||||||| |||||||| || || ||||||||||| | Sbjct 9312841 ATCTCTGTGCACAGATTGCTGGATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTG 9312900 Query 77793 TTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAAT 77851 ||||| | |||||| || || || | || || |||||||| | || || ||||| || Sbjct 9312901 TTGCAGGCGTCCTTGTAGAGCATGTATGGTGTGCCGGTTTCTGTTTGAGACTCGATGAT 9312959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694609449234400