Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq11 569 3e-157 seq15 84.2 3e-11 >seq11 Length=11238946 Score = 569 bits (630), Expect = 3e-157 Identities = 1331/1995 (67%), Gaps = 31/1995 (2%) Strand=Plus/Plus Query 75626 TGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTC 75685 |||||||||||| | || || | |||| || || || || |||||||| ||| Sbjct 5178201 TGAATGGATCCGTTGTGAGCGATGAGCTTATTTTTCATGTCCTCGTTCCACAACCCCCTC 5178260 Query 75686 TCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTT 75745 || || | || | ||||| ||||| || ||||| || || || || |||| || || Sbjct 5178261 TCCGTCAGGTCTTTGAGGAGGTGAGGGTTGACAATCTGGAACTCCCCGGACAGGACCCTG 5178320 Query 75746 CGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCA 75805 || ||||| || || ||||| || | ||| | ||| || ||||| |||| || || || Sbjct 5178321 CGGGTGTAGATGTTGCTGGTGTAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGGGCG 5178380 Query 75806 GTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATT 75865 ||||| || || ||||| || || | | | ||| || || | || || | |||| Sbjct 5178381 GTTGAGGCGGTGGGCATCGGGGCTAAGAGCAGACTGTTCCTCACGCCGTGCTTGGCGATT 5178440 Query 75866 TTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTAT 75925 || || ||||| ||||| ||| | || || | || ||||| | ||||| Sbjct 5178441 TTTTCCTTTAGCAGCTTCCAGTCCAACAGGTCGGTGGGCGTCTTCTCCCACATGTCGTAC 5178500 Query 75926 TGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCA 75985 || || || || ||||| | || || | || |||||||| | |||| || || Sbjct 5178501 TGAAGGATGCCCTTGCTGACCGGGGAGCCTTCGTAGGTTTCGTATGGCCCGAGCTCGGCA 5178560 Query 75986 GCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTA 76045 || || ||||| |||||||| | || |||| || || || ||||| |||| | || Sbjct 5178561 GCCAGCTCGCAGCTCGCCTCGAGGGCTGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTC 5178620 Query 76046 AGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGT 76105 ||| || ||||| | || || || || ||| | | || || ||||| || || | Sbjct 5178621 AGAAGCTGAGCTTCGGGGCTTTCGAACGGGTAACGCATGAGGATGAATGCGTCGGCCAAA 5178680 Query 76106 CCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATA 76165 ||||| || || || || || || || || | ||| ||||| | |||||||| || | Sbjct 5178681 CCCTGGACACCGATTCCTATTGGCCTGTGGCGCTTGTTGGACTTCTCAGCTTCGGGCACT 5178740 Query 76166 GGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCC 76225 || || |||||||||||||| || || || | ||| |||||||||| || ||| | Sbjct 5178741 GGATAGTAATTAATATCTATGATCTTGTTCAAGTTTTTGACAACTACCTTGGTCACAGCA 5178800 Query 76226 TTTAGTTTGAGAAAATCAAATTTTC---CATCTATCACAAACATATTAAGAGCTATAGAT 76282 |||||| |||| ||||| | | || | | || |||| || || || | || Sbjct 5178801 GCTAGTTTTTGAAAGTCAAAAGTCCGCTCAGCGGTGACGTACATGTTGAGTGCGACGGAG 5178860 Query 76283 GCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGA 76342 || ||||||||||| |||||||| | ||| |||| | || || ||||||||| Sbjct 5178861 GCCAGATTACAAACCGCTACCTCGTCGCTGCTGGTGTATTCCACAATTTCTGTGCATAGA 5178920 Query 76343 TTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTA 76402 || || | |||||| || || ||||| || ||||||||||| | || || | || || Sbjct 5178921 TTGCTGCTCTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTATTGCAGGCATCTTTG 5178980 Query 76403 TAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACT 76462 || || | | ||||| || |||||| |||| || || || || | | ||| || || Sbjct 5178981 TAGAGCATGTATGGAGTGCCGGTTTCAGTCTGGGACTCTATGATGGCATGCCAAAC--CT 5179038 Query 76463 -CT-AGCTTTTATTATAGATTTGTATCG--CTTCTCTCTTTCATATTGTGTATATAACCG 76518 || || || | | | ||| || ||||| || || |||| || || | | Sbjct 5179039 GCTGGGCCTTCACCACACGCTTGACGCGGCCTTCTTTC--TCGTATTTGGTGTAGAGCTT 5179096 Query 76519 TTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGA 76578 ||||| || || ||||| |||| || || |||||||| | |||||||| | || Sbjct 5179097 CTCAAACTCCTCCCCCCAGCACTCATTCAGCCCGGGACATTCGTCTGGACACATTAGAGA 5179156 Query 76579 CCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAA 76638 ||| || | || |||| ||||| || | ||||| ||||| | | | || Sbjct 5179157 CCAGTCCTGGTTACTCTCCACCCTCTTCATGAACAAGTCAGGGATCCACATACCGTAGAA 5179216 Query 76639 TAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCAT 76698 || |||| || ||| | || || ||||| || ||||| || | || ||||| || | Sbjct 5179217 AAGGTCTCTGGCTCTCTGCTCCTCTTTTCCAGTGTTCTTCTTCAACTCCAGGAAGTCAAA 5179276 Query 76699 AATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCC 76758 ||||| |||||||| ||||| || || || || | | | || || | || || || || Sbjct 5179277 TATATCGGAATGCCAGGGTTCCAGGTACATGGCGAAAGCCCCAGGCCTCTTGTTTCCACC 5179336 Query 76759 CTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGA 76818 ||| || | ||| | || ||||| || |||||||||| ||| || | || || || || Sbjct 5179337 CTGGTCCACATAGCGTGCGGTGTTGTTGTAAACTCTCAGCATGGGGACAAGCCCATTGGA 5179396 Query 76819 TGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCC 76878 | ||||| || |||| || |||||||| | | || || | | | || Sbjct 5179397 GTTGCCATTGGTGCCAGCGATGTAACTTCCCGTAGATCTGATGCAGCTGACGGCCACACC 5179456 Query 76879 TATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTC 76938 |||||||| ||| || ||||| || || || |||||| |||||||| |||||||| Sbjct 5179457 GATTCCTCCAGCCGACTTGGAGATGAGCGCGCACTGTTTCAGCGTGTCATAAATGCCCTC 5179516 Query 76939 TATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTG----ATGATGAACAG 76994 || || |||||| ||||| || || || ||||| |||| || || || | Sbjct 5179517 GATGCTGTCATCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTG----G 5179572 Query 76995 TTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGT 77054 | ||||||||||| | ||| || || ||||| |||||||| || || || || || |||| Sbjct 5179573 TACCTGCATTAAAGAGTGTCGGGGAGGCATGGGTGAACCACTTCTCTGACAGCAGGTTGT 5179632 Query 77055 ATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACA 77114 | |||||||| |||| || ||||| |||||| || || |||| || | ||| | || Sbjct 5179633 AGGTTTCAATCGCTGCATCAATATCTGTTTGATGGATCCCCACAGAAACCCTCATGAGCA 5179692 Query 77115 TATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAG 77174 | ||||| ||||| || | || || || ||||||| ||| || |||| | Sbjct 5179693 TGTGCTGCGGTCGCTCGGCCACTTTGCCGTTGATCTTCAACAGGTAGGACCGCTCCAGGG 5179752 Query 77175 TTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTT 77234 ||||||| || || | ||||||||||| || | || || || || |||| || || Sbjct 5179753 TTTTAAAGCCGAAGAAATTGTATGAAAAATCACGGTCATATATTATGGCCGAGTTCAGGC 5179812 Query 77235 TGTCCTTATATTTGGTAACAATATC---CATGACAGTGGTAGAAATAATTGGAGATCGTA 77291 ||| || | | | || || || | | | || || | || ||||| || Sbjct 5179813 GGTCTTTGTTCTGGAGGACGATGTCAAGCGTCTCCTTG---GAGACCATGGGAGA--GTG 5179867 Query 77292 TTCCATTTTTA--GGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGttt 77349 | | |||| || || | ||||| | | ||| ||||| ||||| || || | || Sbjct 5179868 ACGCTTATTTAGTGGGTTTATGTAGTTGTACAGGTCCTCCATCACGTCACTGAACACCTT 5179927 Query 77350 ttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGG 77409 ||||| |||||||| || || || ||||| || | ||||| || || || |||||||| Sbjct 5179928 CTTTGTCTCCTTGTGCAGGTTTGAGACGGCGATCCGTGCAGCGAGGATGGCGTAGTCAGG 5179987 Query 77410 ATGTTGTGTAGTGCAG-GTGGCTGCTATTTCTGCCGCTAAAGTATCTAATTCTATAGTAG 77468 |||| || || ||| || || | || ||||| || || || || | || | || | Sbjct 5179988 GTGTTTGGTGGT-CAGAGTAGCAGAGATCTCTGCTGCCAAGGTGTCGAGCTCCACCGTGG 5180046 Query 77469 TAACTCCGTTATATAGCCCTTGAATAACTTTCATGGCTATTTTGATAGGATCTACAAACT 77528 | ||||| || || | || || || || ||||||| || | | || || ||||| | Sbjct 5180047 TGACTCCATTGTACAAACCCTGGATCACCTTCATGGTAATCTGGGCTGGGTCCACAAAGT 5180106 Query 77529 CGGTGTTCAAACCATAACATAATTTTCTAATACGAGATGTGATTTTATCAAACATGACAT 77588 | | ||| | || || || | || || ||||| ||||||||||| |||||||| Sbjct 5180107 CAGCGTTTAGGCCGTAGCACAGCTTCTGGATGCGAGAGGTGATTTTATCGAACATGACGC 5180166 Query 77589 TCTCCTTACATCCAT 77603 ||||| | ||||| Sbjct 5180167 GCTCCTGGCGTCCAT 5180181 >seq15 Length=11516971 Score = 84.2 bits (92), Expect = 3e-11 Identities = 118/166 (71%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 77339 CTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATT 77398 ||||| | ||| || || || ||||||||||| || ||||| || | ||||| || || Sbjct 9314596 CTAAAGACTTTCTTGGTCTCTTTGTGTAGATTGGACACGGCGATCCGTGCAGCCAGGATG 9314655 Query 77399 GCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAAT 77458 ||||| ||||||| || || || |||||||| | ||||| || | ||| || | Sbjct 9314656 GCATAATCAGGATATTTGGTGGTAAGAGTGGCTGCAGTCTCTGCTGCCAGAGTGTCCAGC 9314715 Query 77459 TCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 77504 || | || || ||||| | || || || || || || ||||||| Sbjct 9314716 TCCACTGTGGTGACTCCACTGTACAGGCCCTGGATCACCTTCATGG 9314761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712873488667200