Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13] 6,835 sequences; 391,484,715 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq15 147 2e-30 seq6 107 1e-18 >seq15 Length=11516971 Score = 147 bits (162), Expect = 2e-30 Identities = 174/233 (75%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| ||||| ||||| | || || ||||| || ||| |||||| ||||||||||| || Sbjct 2476970 CATGCCCCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 2477029 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || ||| ||| | || ||||||||||| || |||||||||| | ||||||||| | Sbjct 2477030 GGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGG 2477089 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | |||||||| ||| ||||| |||| | |||| | ||||||||| || | Sbjct 2477090 GGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC-ACGTTCTCAATGGTGTCGCTGGGCT 2477148 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||||| | || || ||||| || || ||||| || || ||||| |||||| Sbjct 2477149 CCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 2477201 Score = 147 bits (162), Expect = 2e-30 Identities = 174/233 (75%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| ||||| ||||| | || || ||||| || ||| |||||| ||||||||||| || Sbjct 2477198 CATGCCCCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 2477257 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || ||| ||| | || ||||||||||| || |||||||||| | ||||||||| | Sbjct 2477258 GGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGG 2477317 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | |||||||| ||| ||||| |||| | |||| | ||||||||| || | Sbjct 2477318 GGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC-ACGTTCTCAATGGTGTCGCTGGGCT 2477376 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||||| | || || ||||| || || ||||| || || ||||| |||||| Sbjct 2477377 CCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 2477429 Score = 140 bits (154), Expect = 2e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || ||||| | || || ||||| || ||| |||||| ||||||||||| |||| | Sbjct 2476746 CCACCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 2476805 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| | || ||||||||||| || |||||||||| | ||||||||| | || Sbjct 2476806 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 2476865 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCAC 44289 | |||||||| ||| ||||| |||| | |||| | ||||||||| || ||||| Sbjct 2476866 ATGCCTTCCTTGTCCTGGATCTTGGCCTTC-ACGTTCTCAATGGTGTCGCTGGGCTCCAC 2476924 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||| | || || ||||| || || ||||| || || ||||| |||||| Sbjct 2476925 CTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 2476973 Score = 140 bits (154), Expect = 2e-28 Identities = 170/232 (73%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| ||||| ||||| | || || ||||| || ||| |||||| ||||||||||| || Sbjct 2477426 CATGCCCCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 2477485 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || ||| ||| | || ||||||||||| || |||||||||| | ||||||||| | Sbjct 2477486 GGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGG 2477545 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | |||||||| ||| ||||| ||||| | | |||||||| || || Sbjct 2477546 GGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTC 2477605 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||||| | || || ||||| || || ||||| || || ||||| |||||| Sbjct 2477606 CACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATG 2477657 >seq6 Length=9412079 Score = 107 bits (118), Expect = 1e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| || ||| |||||| ||||||||||| || | ||| | | |||| | Sbjct 6657395 CACAAGGTGGAGGGTGAACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGTGGCCGTCCTG 6657336 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||||||| || |||||||| | |||||||||||| | ||| | || ||||| || Sbjct 6657335 CAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGATCAGGAGGGATCCCCTCCTTATCATG 6657276 Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| | | ||| | ||| |||| || |||||| | || | || |||| Sbjct 6657275 GATCTTGACCTTGA-TATTCACAATGCTGTCATTGGGTTCCACATTCAGACTGATGGTCT 6657217 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | | || ||||||||||| || || ||||| Sbjct 6657216 TGTCAGTCAGGGTCTTCACAAATATCTGCAT 6657186 Score = 96.9 bits (106), Expect = 2e-15 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||| ||| | | ||| ||||| || ||| || | | ||||||||||| Sbjct 6657188 CATACCACCTGTCAAACGGAGCACAAGGTGGAGGGTGGACTTCATCTGGATGTTGTAGGT 6657129 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || ||| || | | || || |||||||| || ||| |||||| || ||||||||| | Sbjct 6657128 GGAGAGGGCGCACCCATCCTCAAGCTGCTTACCAGCATAGATCAGACACTGCTGATCAGG 6657069 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 ||| | || ||||| || ||||| ||| | | ||| | ||| |||| || || Sbjct 6657068 AGGGATCCCCTCCTTATCATGGATCTTGACCTTGA-TATTCACAATGCTGTCATTGGGTT 6657010 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| | || | || ||||| || || ||||||||||| || || ||||| Sbjct 6657009 CCACATTCAGACTGATGGTCTTGCCAGTCAGGGTCTTCACAAATATCTGCAT 6656958 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 ||||| | ||| |||||| ||||||||||| || ||| | || | || |||||| Sbjct 6656706 AGGTGGATGGTGGACTCCTTCTGGATGTTGTAGGTGGAGAGGTTGCCTCCATCCTCCAGC 6656647 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251 ||||| |||||||||| ||||||| | | ||| | || ||||| || ||| Sbjct 6656646 TGCTTAGTAGCAAAGATCAGACGCTGCAGGAAAGGAGGGATTCCCTCCTTATCGCAGATC 6656587 Query 44252 TTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCC 44311 || ||| | | | ||| | || | |||||||||||| || || ||||| || Sbjct 6656586 TTGGCCTTGACATTCTCAATGCTTTCATTTGGTTCCACCTCCACGGTGATGGTCTTGCCA 6656527 Query 44312 GTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||||| ||||| ||||| Sbjct 6656526 ATGTAGGTCTTCACAAAGATCTGCAT 6656501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359960412237195