Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_033176.1
Length=224064
Score E
Sequences producing significant alignments: (Bits) Value
seq1303 156 6e-33
seq21 104 3e-17
>seq1303
Length=194977
Score = 156 bits (172), Expect = 6e-33
Identities = 197/271 (73%), Gaps = 0/271 (0%)
Strand=Plus/Plus
Query 8315 ACGTTGCTACAGACTAGAGACTGAATAGTTGCGCTCTTGACGATCCCGAACCCCACGTCT 8374
|| ||| | ||||| || ||| | || ||| | |||||||| |||| ||||| | |
Sbjct 52541 ACATTGTTGCAGACGAGCATCTGCAGCGTGGCGGTGTTGACGATGTCGAAGCCCACTTTT 52600
Query 8375 CCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTCGCCATGAGGCCT 8434
|| ||||| |||||||| |||||||| |||| ||||||||| ||| |||| | |||
Sbjct 52601 CCTCCGAATGTGCTGGGTTTCCAGTATTCCGGAGAGCAGATGGGGTTTCCCATTAAGCCC 52660
Query 8435 TTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGG 8494
||||| || | || ||||||| || | | | |||| || ||||||||||| | | |
Sbjct 52661 TTGAGAGAATAGGGGGCCCCCATTTCCACCAGGGTCTCCCCAAAGATGGCGTTAGTCCTG 52720
Query 8495 GGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCTCCGTAAAGGGCC 8554
||||| ||||||| | || ||||| ||||||||||| ||||||| ||||| | |
Sbjct 52721 GGCTTCTCCACCAGCAGACCTGTGTAGAGCTCCACAGCATCGACGTGGCCGTACATTTCT 52780
Query 8555 CTGAGTTCGGCAGCGATCTCCTTTTCTCCTG 8585
|| || || || || || || |||||||
Sbjct 52781 TCAAGCTCTGCTGCCATTTCTTTCTCTCCTG 52811
Score = 122 bits (134), Expect = 1e-22
Identities = 166/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 9244 ATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCAGA 9303
|| || || |||||||||||||| ||||| ||| ||||| || | | ||||
Sbjct 54188 ATCAGCCGCGTGGTCTGGAACAGCCTTTCGTCGTCCCAGTCTGGGTGAACCTCCTTCAAC 54247
Query 9304 ACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAGGT 9363
|| || ||||||| ||||||||||| |||||||||||||| |||||||| || || |||
Sbjct 54248 ACGTCACACACCCGGTTGTGTTCCCGAAGCCAGATAGTGGCATACATCATCAGGCCCGGT 54307
Query 9364 ACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCGGGAGGA 9423
||||| || || ||||| ||||| || || || || ||||| | | ||| ||
Sbjct 54308 ACCAGACCGAAGGCCTCGTGACCCACCGCGAGGCGTTCAGACTCGGGAATGTTGGGGGGG 54367
Query 9424 TAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCGT 9475
||| ||||| || ||||| || || | || || |||| ||| ||||
Sbjct 54368 TAGTGCATGTCAGCCCCCACGTCCTTCACTGTTGGCGGGTACACTTCCCCGT 54419
>seq21
Length=14900632
Score = 104 bits (114), Expect = 3e-17
Identities = 131/180 (73%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 8303 GGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATAGTTGCGCTCTTGACGATCCCG 8362
||||||| |||| |||| ||| || || | | ||| || | |||||||| |
Sbjct 10788878 GGACACCACTTGGTGTTGAGACACACCAGTTTCCTTAAAGTGGCCGTTTTGACGATATTG 10788819
Query 8363 AACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTC 8422
|| || ||||| || ||||||||||||||||||||| | |||||||||||| ||
Sbjct 10788818 AAGCCTGTCTCTCCCCCAAAGGTGCTGGGCTTCCAGTACTCTGGGGAGCAGATGGGATTT 10788759
Query 8423 GCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATG 8482
| | ||||||||||||||||| |||| |||| ||| | || ||||| || || |||
Sbjct 10788758 CCAAACAGGCCTTTGAGGGAGAAAGGAGAGCCCATCTCCACCATACTCTCTCCAAATATG 10788699
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 716815551838400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |