Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq14537 354 1e-92 seq14703 102 1e-16 >seq14537 Length=2063196 Score = 354 bits (392), Expect = 1e-92 Identities = 1045/1600 (65%), Gaps = 13/1600 (1%) Strand=Plus/Plus Query 53426 CAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGT 53485 || || ||||| | || |||| || ||||| |||||||||| | || || || Sbjct 886013 CAGCTGGCCTCCAGGGCCGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAGCAGCTGA 886072 Query 53486 GCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACA 53545 || || |||| || || || || | ||| || || ||||| || | || || || Sbjct 886073 GCCTCGGGGCTCTCGAACGGGTAGCGCATGAGGATGAAGGCGTCCGCCAGCCCCTGGACG 886132 Query 53546 CCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAA 53605 || || ||||| || | || | | | || ||| || || || || | || || || Sbjct 886133 CCGATCCCGATGGGCCGGTGGCGCCTGTTGGAGCGCTCGGCCTCGGGCACCGGGTAGTAG 886192 Query 53606 TTAATATCTATAATTTTATTGAGGTTTCTGACAATTACTTTGACCACATCCTTCAGTTTG 53665 || || || || || || || ||||||||||| | || ||| ||| | ||| ||| Sbjct 886193 TTGATGTCGATGATCTTGTTCAGGTTTCTGACCACCACCTTGGTCACGGCGGCCAGCTTG 886252 Query 53666 AGAAAATCAAATTGTCCA-TCTA---TTACAAACATGTTCAATGCAATAGATGCCAGATT 53721 | || || || || || || | || ||||||| | || || || ||||| || Sbjct 886253 TGGAAGTCGAAG-GTGCACTCGGGGGTGACGTACATGTTGAGCGCGATGGAGGCCAGGTT 886311 Query 53722 ACAAACGGCTACCTCATTAGCATCCGCA-TATTGTATTATCTCAGTGCAAAGATTACTAC 53780 || ||||| ||||| | || | | |||| | ||||| ||||| || || || | Sbjct 886312 GCAGACGGCCACCTCGTC-GCTGCTGGTGTATTCCACGATCTCCGTGCACAGGTTGCTGC 886370 Query 53781 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 53840 |||||||| || | || || || || ||||| |||| || || || || || || | Sbjct 886371 TTTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTAGAGCA 886430 Query 53841 TGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCT 53900 || | || || || ||||| ||||||| || || || || | ||| || | |||| Sbjct 886431 TGTACGGGGTGCCGGTTTCCGTCTGGGACTCGATGATGGCGTGCCACACCTGCTGGGCCT 886490 Query 53901 TTATTATAGATTTGTATCTCTTTTCTCTTTCGTATA--GTGTATACAATCGTTCAAACTC 53958 | | | ||| | || | ||||| ||||| | || |||||||| Sbjct 886491 TCACCACGCGCTTGACGCGGCCCTCCTTCTCGTAGGAGGTGTAGAGCTTC--TCAAACTC 886548 Query 53959 GTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCC 54018 || ||||| | || ||| || || ||||| ||||||||||||| ||||| || Sbjct 886549 CTCCCCCCAGCACTCGTTCAAGCCGGGGCATTCGTCCGGACACATCAGAGACCAGTCCTG 886608 Query 54019 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 54078 || || ||| | ||||| || | || || ||||| || || || || || || Sbjct 886609 GTTGCTCTCCACCCTCTTCATGAACAAGTCGGGGATCCAGAGCGCGTAGAACAGGTCCCT 886668 Query 54079 GGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 54138 || ||| || ||||| || || || ||||| || || || ||||| | | | || | Sbjct 886669 GGCTCTCTGCTCCTCCTTCCCCGTGTTCTTCTTCAGCTCCAGGAAGTCAAAGACGTCGAA 886728 Query 54139 ATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTAT 54198 ||||| || |||| ||| |||| | | || ||||| ||||| |||||||| || | Sbjct 886729 GTGCCAGGGCTCCAGGTACATGGCGAAGGCGCCGGGCCGCTTGTTCCCTCCCTGGTCCAC 886788 Query 54199 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATT 54258 ||| | || ||||| || |||||||||| ||| || | | || ||||| || || Sbjct 886789 GTAGCGTGCCGTGTTGTTGTAAACTCTCAGCATGGGCACCAGGCCGTTGGAGTGGCCGTT 886848 Query 54259 GGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCC 54318 ||| |||| ||| || || || |||| || || || | | | || || ||||| Sbjct 886849 GGTGCCGGCGATGTAACTCCCCGTGGCTCGGATGCAGCTGACGGCCACGCCGATGCCCCC 886908 Query 54319 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATC 54378 ||| || ||||| | ||||| | || | ||| || || |||||||| || || || Sbjct 886909 GGCCGACTTGGAGATGAGCGCGCACTGCTTGAGCGTGTCGTAAATGCCCTCGATGCTGTC 886968 Query 54379 ATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAA 54438 ||| ||||| || || || ||||| |||| || | || | || || || || || Sbjct 886969 GTCCTTCATGGCCAGCAGGAAGCAGCTGGACAGCTGCGGCCGGTTGGTGCCTGCGTTGAA 887028 Query 54439 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGC 54498 | || || || ||||| || ||||| || || || || || ||||| || ||||| || Sbjct 887029 GAGCGTGGGCGAGGCGTGGGTGAACCACTTCTCCGACAGCAGGTTGTAGGTTTCGATGGC 887088 Query 54499 TGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 54558 | ||| || || ||| || || || || | ||| | ||| | ||||||||| || | Sbjct 887089 CGCGTCGATGTCGTTTTGGTGGATGCCGACGGAGACCCTCATCAGCATGTGCTGCGGCCG 887148 Query 54559 TTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 54618 || | | ||| ||| || ||||||| |||||| |||| || || || || || Sbjct 887149 CTCGGCCACTTTGCCGTTGATCTTCAGCAGGTAGGAGCGCTCCAGGGTCTTGAAGCCGAA 887208 Query 54619 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTT 54678 ||||||| ||||| || || ||||| || || | ||||| || || | | | Sbjct 887209 GAAGTTGTACGAAAAATCGCGGTCGTAGATGATGGCCGAGTTCAGGCGGTCTCTGTTCTG 887268 Query 54679 GTTAACTACATCCATGGTAATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGAT 54737 || | |||| || | ||| || | || || || || || ||| || | Sbjct 887269 CAGGACGATGTCCAGCGT-CTCCTTGGAGACCATGGGGGAGTGGCACCTGTTTAAGGGGT 887327 Query 54738 TGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTA 54797 |||| ||||| | | |||| |||||| || || || | || || || |||||||| | Sbjct 887328 TGACGTAGTTGTACAGGTCCTCCATCACCTCGCTGAACACCTTCTTGGTCTCTTTGTGCA 887387 Query 54798 GATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAG 54857 | || || ||||| || | || || || ||||| || || || || | || || | Sbjct 887388 GGTTGGAGACGGCAATCCGCGCAGCCAGGATGGCGTAGTCGGGGTGCTTGGTGGTCAGGG 887447 Query 54858 TGGCTGCTATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTC 54917 |||| | || || || | ||| ||||||| || ||||| || || || | || | | Sbjct 887448 TGGCGGAGATCTCCGCCGCCAGCGTGTCCAGCTCCACCGTGGTGACCCCGCTGTACAGAC 887507 Query 54918 CTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAAC 54977 | ||||| |||||||| | || | | || || | | |||| ||| | ||| || | Sbjct 887508 CCTGGATCACCTTCATGGTGATCTGAGCCGGGTCCACAAAGTCAGCGTTCAGGCCGTAGC 887567 Query 54978 ATAATTTTCTAATACGAGATGTGATTTTATCAAACATGAC 55017 | | || || || || |||||||| || |||||||| Sbjct 887568 ACAGCTTCTGGATGCGGGAGGTGATTTTGTCGAACATGAC 887607 Score = 102 bits (112), Expect = 1e-16 Identities = 125/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 52875 TCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 52934 |||| ||||| || ||||| || || |||||| || | || ||||| || ||||| | Sbjct 885373 TCCAGCCGTAGAAGTGCATGCTGGTCAGTTTGCCGTAGTTGGGCTCTGCGATGTGGATGT 885432 Query 52935 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 52994 ||||||| || || || ||||||||||| || | ||| || ||||| || |||| ||||| Sbjct 885433 TCATAGACTGGCTCTGGTCGATGAAGGCGCCGCGGTCGGCCGCCATCTTGATGACCGTCT 885492 Query 52995 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 53045 | || | || ||||| | || || || | |||| | ||| | ||||| Sbjct 885493 TCTGGGAGATCTCCCACACCGTCTTGTACAGCTGCTTCACATCGTTTGGAA 885543 >seq14703 Length=1421099 Score = 102 bits (112), Expect = 1e-16 Identities = 124/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 52875 TCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 52934 |||| || ||||| ||||| || || |||||| || | || ||||| || ||||| | Sbjct 454816 TCCAGCCATAAAAGTGCATGCTGGTCAGTTTGCCGTAGTTGGGCTCTGCGATGTGGATGT 454757 Query 52935 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 52994 | | || || || |||||||||||||| || | |||||| ||||| || | || |||| Sbjct 454756 TGAGCGACTGGCTCTGATCGATGAAGGCGCCGCGGTCTGCTGCCATCTTGAGGACGGTCT 454697 Query 52995 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGG 53043 | || | |||||||| | ||||||||| | |||| | ||| || || Sbjct 454696 TCTGGGAGATTTCCCACACAGTTTTATACAGCTGCTTCAGATCGTCAGG 454648 Score = 89.7 bits (98), Expect = 6e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 54028 CACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATG 54087 |||||||||||||||||| || || ||||| | ||| | || || || |||| || || Sbjct 453013 CACTCGTTTCATAAAGAGGTCTGGTATCCACAAAGCAAAGAACAGGTCCCTGGCCCTCTG 452954 Query 54088 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 54147 ||||| || || || ||||| || | || ||||| | | || ||| ||||||||||| Sbjct 452953 CTCCTCTTTGCCCGTGTTCTTCTTCAACTCCAGGAAGTCAAAAACATCGGAATGCCACGG 452894 Query 54148 TTCCAAGTA 54156 |||| ||| Sbjct 452893 CTCCAGGTA 452885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593530325165040