Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq14979 129 7e-25 >seq14979 Length=3670432 Score = 129 bits (142), Expect = 7e-25 Identities = 193/272 (71%), Gaps = 4/272 (1%) Strand=Plus/Plus Query 83125 GCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGG 83184 |||||| | || || | ||||||||| |||||||||||||||||||| | ||| || || Sbjct 768602 GCCGTCGGGCCCGACGAGGAACTTCTCAAAGTTCCAGGCCACGTCGTTCCTGCAGACGGG 768661 Query 83185 AGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGG 83244 | |||| || |||| |||||| | ||| | ||| ||||||||| || | || Sbjct 768662 ACTCCAGATGATCAGCTTAGGGTCGGAGATGAGAGCGCTTGGGTCGTCGCTGGGGGAAGG 768721 Query 83245 CAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGC--CCTTGCACCGTTGACCTCGCAC 83302 ||| || || ||||| |||||| || || || |||| ||||| || || | Sbjct 768722 CAGCTTTTCCCGGAGGAACTGGAAGAGGGGGTGGGCATCCTT--CCCGTTCACATCCACC 768779 Query 83303 TTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAA 83362 ||||| | |||| || || |||||||| || | |||||| |||||||| ||||| || Sbjct 768780 TTCTCAAGGAGCTGGAACTTGGGCTCGAAACCATGCCCAGGGCGGACGTGTTTCAGAGAC 768839 Query 83363 GGCAAGATCTCGGCATTCTGGGCGTTTTCCTG 83394 | ||| || |||||| | ||| ||||| Sbjct 768840 AAGAGGATTTCCTCATTCTTGCAGTTCTCCTG 768871 Score = 86.0 bits (94), Expect = 8e-12 Identities = 112/149 (75%), Gaps = 6/149 (4%) Strand=Plus/Plus Query 83391 CCTGGTGACCGAACTGGTTACACGGGAAC-CCAAGCACTACCAGCCCCCGAGCT--CCTA 83447 |||| || ||||||||||| || |||||| || || || || || ||| ||| | || Sbjct 769195 CCTGATGGCCGAACTGGTTGCA-GGGAACTCCCAGGACGACGAGACCCTT-GCTGGCGTA 769252 Query 83448 GGCGCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACG 83507 | ||| ||||||||||||||||| ||||| |||| | || | |||||||| |||| Sbjct 769253 G-CGCTCATGCAGCTCGTTCATCTGGGTGTAATCCCTGGTGGTCGTTCCTCAGAGAGACG 769311 Query 83508 CTACGTTCTCGATGAGCAAGACCCGGCCC 83536 | || ||||| ||||||| ||| |||| Sbjct 769312 CCACATTCTCAATGAGCACCACCTTGCCC 769340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608600668500920