Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_001901.1 Length=46375 Score E Sequences producing significant alignments: (Bits) Value seq23023 1546 0.0 >seq23023 Length=988 Score = 1546 bits (1714), Expect = 0.0 Identities = 934/986 (95%), Gaps = 0/986 (0%) Strand=Plus/Minus Query 3100 GAAGGTGTGGCCATGCATGCGTTTAACGGTGAATTATGCGTGCAGGCGACCTGGGACAGC 3159 ||||||||| ||||||| ||||| | ||||||||||||| ||||||||||||||||||| Sbjct 987 GAAGGTGTGCCCATGCACGCGTTAANCGGTGAATTATGCACGCAGGCGACCTGGGACAGC 928 Query 3160 GATTCAACGCGTCTTTTCCGCACCCAGTTCAAAATGGTCAGTCCGAAGCGCGTCAGCAAC 3219 |||||||||||||||||||| || |||||||| |||||||||||||||||||||||||| Sbjct 927 GATTCAACGCGTCTTTTCCGTACTCAGTTCAANATGGTCAGTCCGAAGCGCGTCAGCAAT 868 Query 3220 CCGAACAATATCGGTGATACCCGGAACTGTCGTGCCGGTGTAAAAATCAATGATAGCGGT 3279 ||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||| Sbjct 867 CCGAATAATATCGGTGATACCCGGAACTGTCGCGCCGGTGTGAAAATAAATGATAGCGGT 808 Query 3280 GCTGCGCTGGGATATTACGTCAGCGACGATGGCTATCCCGGCTGGATGGCGCAAAACTGG 3339 |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct 807 GCTGCGCTGGGATATTACGTCAGCGACGATGGTTATCCCGGCTGGATGGCGCAGAACTGG 748 Query 3340 ACCTACATCCCTCGCGAACTACCCGGCGGTCGACCTTCGTTTATCCATGTATTCGAACCG 3399 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 747 ACCTACATTCCTCGCGAACTACCCGGCGGTCGACCTTCATTTATCCATGTATTCGAACCG 688 Query 3400 ATGGAGGATGGACAGACCCGTGGGGCCAATGCGTTTTACAGCGTGATGGAGCAGATGAAA 3459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 687 ATGGAGGATGGACAGACCCGTGGGGCCAATGCGTTTTACAGCGTGATGGAGCAGATGAAA 628 Query 3460 ATGCTCGACACCCTGCAAAATACCCAGCTCCAGAGCGCGATAGTGAAGGCTATGTATGCG 3519 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 627 ATGCTCGATACCCTGCAAAATACCCAGCTCCAGAGCGCGATAGTGAAGGCTATGTATGCC 568 Query 3520 GCTACCATCGAGAGTGAGCTGGATACCCAATCGGCGATGGACTTTATTCTCGGTGCAGAT 3579 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||| Sbjct 567 GCTACCATCGAGAGTGAACTGGATACCCAATCGGCGATGGACTTTATTCTCGGCGCGGAT 508 Query 3580 AATAAAGAGCAGCAGAGCAAACTGACGGGCTGGCTCGGCGAAATGGCAGCCTATTACTCT 3639 ||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||| Sbjct 507 AATAAAGAGCAGCAGAGCAAACTTACGGGCTGGCTCGGTGAAATGGCGTCCTATTACTCA 448 Query 3640 GCTGCGCCGGTTCGCCTTGGCGGGGCAAGGGTCCCACACCTGTTGCCAGGGGATTCTCTT 3699 |||||||| |||||||| || ||||||||||| |||||||||||||| || |||||||| Sbjct 447 GCTGCGCCTGTTCGCCTGGGTGGGGCAAGGGTTCCACACCTGTTGCCGGGTGATTCTCTC 388 Query 3700 AACCTTCAGTCGGCGCAGGATACCGATAACGGCTATTCAACGTTCGAACAATCCCTGCTG 3759 ||||||||||||||||||||||||||||||||||| || || || ||||| ||||||||| Sbjct 387 AACCTTCAGTCGGCGCAGGATACCGATAACGGCTACTCGACTTTTGAACAGTCCCTGCTG 328 Query 3760 CGTTATATTGCTGCAGGGCTGGGTGTGTCGTATGAGCAGCTTTCACGAAATTATTCGCAG 3819 ||||||||||| || ||||| ||||||||||||||||||||||| ||||| ||||||||| Sbjct 327 CGTTATATTGCCGCTGGGCTTGGTGTGTCGTATGAGCAGCTTTCGCGAAACTATTCGCAG 268 Query 3820 ATGAGCTACTCGACCGCACGCGCAAGTGCTAACGAGTCCTGGGCGTACTTTATGGGGCGT 3879 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 267 ATGAGCTACTCGACCGCACGCGCAAGTGCTAACGAGTCCTGGGCGTACTTTATGGGGCGT 208 Query 3880 CGAAAGTTTGTGGCATCCCGACAGGCCTGTCAGATGTTTCTTTGCTGGCTTGAAGAGGCG 3939 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 207 CGCAAGTTTGTGGCATCCCGACAGGCCTGTCAGATGTTTCTTTGCTGGCTTGAAGAGGCG 148 Query 3940 ATTGTCCGCCGCGTGGTCACGCTTCCTTCGAAAGCCAGGTTCAGTTTCCAGGAGGCGAGA 3999 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 147 ATTGTCCGCCGCGTGGTCACGCTTCCTTCGAAAGCCCGGTTCAGTTTCCAGGAGGCGAGA 88 Query 4000 ACAGCCTGGGGGAATGCCAACTGGATTGGTTCTGGTCGAATGGCAATTGACGGTCTGAAA 4059 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct 87 ACAGCCTGGGGGAATGCCAACTGGATTGGCTCTGGTCGAATGGCAATTGACGGGCTGAAA 28 Query 4060 GAGGTGCAGGAAGCCGTCATGCTAAT 4085 ||||| ||||| ||||||||||| || Sbjct 27 GAGGTACAGGAGGCCGTCATGCTCAT 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148233018746962