Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq14555 273 2e-68 seq14999 125 5e-24 >seq14555 Length=2216418 Score = 273 bits (302), Expect = 2e-68 Identities = 586/858 (68%), Gaps = 16/858 (2%) Strand=Plus/Minus Query 107710 ACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAACTTTGAACGGCTGC 107769 |||||||||| || ||||| |||||| |||| |||||||| || | || || ||||| | Sbjct 879320 ACTTCCCCATCGCGTACTCCATGGTGATCCACGAGAAGATCGAGATGTTCGAGCGGCTCC 879261 Query 107770 TGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTGGATGTGAAGTCCCCAG 107829 |||| ||| | || |||| |||||||| ||||| |||||||| || ||| |||| | Sbjct 879260 TGCGGGCCATCTACACCCCGCAGAACATCTACTGCGTCCACGTCGACCAGAAATCCCAGG 879201 Query 107830 AGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTCCCCAATGTCTTCATGGCCA 107889 | ||||| | ||| || |||||| | |||||| ||||||| || ||| |||||| Sbjct 879200 ATGAGTTCAAGGCGGCCGTGGGGGCCATCGTGTCCTGCCTCCCCAACGTGTTCCTGGCCA 879141 Query 107890 GTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGTA 107949 ||| ||| ||||| || || || |||||| | || || || ||||||||||| | Sbjct 879140 CCAAGATGGAGAGCGTGGTCTACGCGTCGTGGTCCCGCGTCCAGGCGGACCTGAACTGCA 879081 Query 107950 TGGAAGACTTGCTCCAGAGCTCAGTGCCA-TGGAAGTACTTACTGAATACATGCGGGACA 108008 || |||| |||| | | ||| ||| ||||||||| | ||||| |||||||||| Sbjct 879080 TGAGAGACCTGCTGGA-CTCCCAGGTCCAGTGGAAGTACCTGCTGAACACATGCGGGAGC 879022 Query 108009 GACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCCCTCAAGATGTTGAAGGGTAAG 108068 ||||||||||| || ||||| |||||||| | | | || ||| ||| ||| | Sbjct 879021 GACTTCCCCATCAAAACCAACCGGGAGATGGTGCAGACGCTGCAGACCCTGAGGGGCAGC 878962 Query 108069 AACAGTATGGAGTCTGAG-GTACCTTCTGAGTCCaaaaaaaaTCGCTGGAAATACCGCTA 108127 ||||| |||||||| ||| ||| | || | ||| || |||||| | |||| | | Sbjct 878961 AACAGCATGGAGTCGGAGACCACCAAC-GACTACAAGAAGGGCCGCTGGCAGTACCACCA 878903 Query 108128 TGAGGTGACAGA-CACACTGTACCCTACCAGCAAGATGAAGGACCCTCCCCCTGATAATT 108186 ||| || || || || || ||| | || |||| ||| || || || Sbjct 878902 CCGGGTCACGGATCAGGTCGT-CCGGACCGACGCGACCAAGGGCCCCCCGCCCATAAACA 878844 Query 108187 TACCCATGTTCACAGGGAATGCCTATTTTGTGGCCTCTCGAGCCTTTGTCCAACATGTCT 108246 ||||||||| | ||||| ||||| || |||| || | || ||||| || || | | Sbjct 878843 CCCCCATGTTCTCCGGGAACGCCTACTTCGTGGTGTCCAGGGCGTTTGTGCACCACG-CG 878785 Query 108247 TAGAC-AACCCTAAATCCCAAAGACTGGTTGAATGGGTCAAAGACACCTATAGCCCCGAC 108305 | ||| || | | || || | || |||| || ||||||| ||||| ||| Sbjct 878784 TTGACGGACGCGGAGGTGCAGGCGCTCCTGGAGTGGGAGAAGGACACCTTCAGCCCGGAC 878725 Query 108306 GAACACCTCTGGGCCACCCTTCAGCG--TGCTCCGTGGATGCCTGGCTCTGTTCCTAGCC 108363 || ||||| ||||||||||| ||| | ||| || || | || || || || || | Sbjct 878724 GAGCACCTGTGGGCCACCCTGCAGAGGATGCCCC--GGGTCCCGGGGTCGGTGCCCCCCA 878667 Query 108364 ACCCCAAGTATCACATCTCAGACATGACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACC 108423 || |||||| ||| || |||||| ||| | || | | ||||||||| ||| Sbjct 878666 ACGACAAGTACGACACGTCGGACATGCTGGCCCTGGCGCGCGTGGTCAAGTGGGGCTACT 878607 Query 108424 ACGAGGGAGATGT-CAGCATGGGGGCGCCTTATGCACCCTGCTCTGGAATCCATCGGAGG 108482 | ||| || || |||| |||||| || || ||||||| | || | | |||| Sbjct 878606 TAGCGGGGGACGTGGAGCA-GGGGGCCCCGTACCGACCCTGCACCGGGGACTACAGGAGA 878548 Query 108483 GCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGATTCTC-CAGAACCATCACCTCTT 108541 || | ||| | ||||| || |||||| | ||| | ||| || || | ||||| || Sbjct 878547 TCCGTGTGCGTGTACGGAGCAGGGGACGTCCGGTGGCTCCTCGCACAAAGA-CACCTGTT 878489 Query 108542 GGCAAACAAGTTTGACCC 108559 ||| |||||||| || || Sbjct 878488 GGCCAACAAGTTCGATCC 878471 >seq14999 Length=2289657 Score = 125 bits (138), Expect = 5e-24 Identities = 147/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 107754 AACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTG 107813 |||||||| | || ||||| || | ||||| ||||||||||| ||||||||||||||| Sbjct 485518 AACTTTGAGAGACTTCTGCGGACCATCTATGCTCCTCAGAACATTTACTGTGTCCACGTG 485459 Query 107814 GATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTCCCC 107873 || || ||| | | || | || |||| ||||||| | |||||||||||| Sbjct 485458 GACCAAAAATCCACGCCCTCCTTTCGCGCTGCCGTCACGGCCATTGTGTCCTGCTTCCCC 485399 Query 107874 AATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAA 107933 || || ||||||| ||| || || ||||| |||||| ||||||| | || ||| Sbjct 485398 AACGTTTTCATGGTCAGCCAGCCTGTTAGTGTGGTCTATGCCAGCTGGTCCCGCGTCCAA 485339 Query 107934 GCTGACCTGAACTGTATGG 107952 |||||| | |||||||||| Sbjct 485338 GCTGACATTAACTGTATGG 485320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 348159405831402