Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq14537 125 2e-23 >seq14537 Length=2063196 Score = 125 bits (138), Expect = 2e-23 Identities = 630/1003 (63%), Gaps = 38/1003 (4%) Strand=Plus/Minus Query 248437 GACGGGCGCAAAGAAAACGTTCTCTTCGACAAAATCTCGGCGCGCATCAAGAAGCTCTGT 248496 || |||||| | || ||| | |||||||||||| | | |||||| ||||||| || Sbjct 887625 GATGGGCGCCAGGAGCGCGTCATGTTCGACAAAATCACCTCCCGCATCCAGAAGCTGTGC 887566 Query 248497 TATGGTCTGGAACCCAACTTCGTCGATCATGTGGCCATCGCCCAGAAAGTTATTTCGGGC 248556 || || ||| | | |||| || || | | ||| || ||| || || ||| Sbjct 887565 TACGGCCTGAACGCTGACTTTGTGGACCCGGCTCAGATCACCATGAAGGTGATCCAGGGT 887506 Query 248557 GTCTACACCGGAGTAACAACGACAGAACTGGACACCTTAGCTGCGGAGACGGCGGCGTAC 248616 | |||| ||| || || ||| || |||||||| | || ||||||| | || | Sbjct 887505 CTGTACAGCGGGGTCACCACGGTGGAGCTGGACACGCTGGCGGCGGAGATCTCCGCCACC 887446 Query 248617 ATGGCGATTGCACACCCCGACTACTCGCTGCTGGCCGGGAGGATCGCCGTCTCAAGGCTT 248676 || | | |||||||||||| | | ||||| | | |||| |||||||| | || Sbjct 887445 CTGACCACCAAGCACCCCGACTACGCCATCCTGGCTGCGCGGATTGCCGTCTCCAACCTG 887386 Query 248677 CACAAAGAAACGAAAGAGTCGTTCGTCGAAACCATGGCTGACCTACATGCCTATG----- 248731 |||||||| || || || |||| ||| |||| ||||| | ||| | Sbjct 887385 CACAAAGAGACCAAGAAGGTGTTCAGCGAGGTGATGGAGGACCTGTACAACTACGTCAAC 887326 Query 248732 ----------GG------------ATGGTCGCCGATGA--CG-TCCACACCGTCATTCAG 248766 || |||||| || | || || | ||| |||| | ||| Sbjct 887325 CCCTTAAACAGGTGCCACTCCCCCATGGTCTCCAAGGAGACGCTGGACATCGTCCTGCAG 887266 Query 248767 GACAACGCGCACCTCCTGGACGGCGCGATTGACTACGGCAAAGATTTGGAGTACGATTTC 248826 ||| | ||| |||| || || || ||||| | ||||| |||| | ||| Sbjct 887265 AACAGAG---ACCGCCTGAACTCGGCCATCATCTACGACCGCGATTTTTCGTACAACTTC 887209 Query 248827 TTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAA 248886 || | ||||| || |||||| || || || || || || | ||||| | | || Sbjct 887208 TTCGGCTTCAAGACCCTGGAGCGCTCCTACCTGCTGAAGATCAACGGCAAAGTGGCCGAG 887149 Query 248887 CGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGC 248946 || ||||||||| ||||| | || | ||||| || ||| | | ||||| || || Sbjct 887148 CGGCCGCAGCACATGCTGATGAGGGTCTCCGTCGGCATCCACCAAAACGACATCGAC-GC 887090 Query 248947 GTGC-TCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCT 249005 | | |||| || |||| | || || ||| | || || ||| | || ||||| Sbjct 887089 GGCCATCGAAACCTACAACCTGCTGTCGGAGAAGTGGTTCACCCACGCCTCGCCCACGCT 887030 Query 249006 CTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGA 249065 ||||||||| || ||| | |||||| | ||||| || || |||||| | || Sbjct 887029 CTTCAACGCAGGCACCAACCGGCCGCAGCTGTCCAGCTGCTTCCTGCTGGCCATGAAGGA 886970 Query 249066 CGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACGGCGAAGATTTCTAAATTCGC 249125 |||| |||| |||||||| |||||||| || ||| ||| || || || | || Sbjct 886969 CGACAGCATCGAGGGCATTTACGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGTCGGC 886910 Query 249126 GGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTAC 249185 || || ||||| | ||||| | ||||||||| | ||| |||||| || || Sbjct 886909 CGGGGGCATCGGCGTGGCCGTCAGCTGCATCCGAGCCACGGGGAGTTACATCGCCGGCAC 886850 Query 249186 AAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTT 249245 || || | | || | || ||| | || || | | ||| || | | Sbjct 886849 CAACGGCCACTCCAACGGCCTGGTGCCCATGCTGAGAGTTTACAACAACACGGCACGCTA 886790 Query 249246 CATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCA 249302 | | |||||| ||| | || || | ||||||||||| |||| ||||| Sbjct 886789 CGTGGACCAGGGAGGGAACAAGCGGCCCGGCGCCTTCGCCATGTACCTGGAGCCCTGGCA 886730 Query 249303 CGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGC 249362 | ||| | || || |||||||| |||| ||||||| || || ||| |||||| Sbjct 886729 CTTCGACGTCTTTGACTTCCTGGAGCTGAAGAAGAACACGGGGAAGGAGGAGCAGAGAGC 886670 Query 249363 GCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATG 249405 | ||||| ||||||| || ||| || |||||||||||||| Sbjct 886669 CAGGGACCTGTTCTACGCGCTCTGGATCCCCGACTTGTTCATG 886627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073411824550464