Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq14557 89.7 4e-13 >seq14557 Length=1650391 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||||| || | || || | ||| || || || ||||| || ||||||||||||| | Sbjct 91282 CCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 91341 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | |||||| | || ||||| ||| |||| || || || ||||| ||| Sbjct 91342 AGGGTGCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 91401 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||||||||| || || | ||| || | ||| ||||| | |||||| Sbjct 91402 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACC 91461 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| |||||| ||||||| || | || || ||||| || ||||| Sbjct 91462 TCAAGAGTGATGGTTTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 91508 Score = 87.8 bits (96), Expect = 1e-12 Identities = 161/236 (68%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 18090 TTTTGTTATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTG 18149 |||| || || |||| | || || || | ||| || || || || || || |||||| Sbjct 90817 TTTTATTGACCACCCCTCAATCGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTG 90876 Query 18150 TAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGA 18209 ||||||| || || | |||||||| || ||||| ||| |||| || || || ||| Sbjct 90877 TAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGA 90936 Query 18210 TCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCG 18269 || ||| | ||||||||| || || | ||| || | ||| ||||| | | Sbjct 90937 TCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTG 90996 Query 18270 GGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| |||| ||||||| ||||||| || | || || || || || ||||| Sbjct 90997 GGCTCCACCTCAAGGGTGATGGTTTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 91052 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||||| || | || || | ||| || || || ||||| || ||||||||||||| | Sbjct 91054 CCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 91113 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | |||||| | || ||||| ||| |||| || || || ||||| ||| Sbjct 91114 AGGGTGCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 91173 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||||||||| || || | ||| || | ||| |||||| |||||| Sbjct 91174 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGTTGTCACTGGGCTCCACC 91233 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | ||||||| ||||||| || | || || || || || ||||| Sbjct 91234 TCGAGGGTGATGGTTTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 91280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379224844848885