Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq14537 466 2e-126 seq14703 129 5e-25 seq7053 98.7 9e-16 seq3173 98.7 9e-16 seq14557 93.3 4e-14 >seq14537 Length=2063196 Score = 466 bits (516), Expect = 2e-126 Identities = 1082/1626 (67%), Gaps = 17/1626 (1%) Strand=Plus/Plus Query 22366 CTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGAT 22425 ||||||||| ||||| | | |||| | || || || |||||||||| || | Sbjct 885643 CTGGACGGAGCCGTTGTGGGCGATGAGCTGGTTCTTCATGTCCTCGTTCCACAGGCCCCT 885702 Query 22426 GGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCG 22485 | |||| || |||| ||| || |||| || | || ||||| || |||| || | Sbjct 885703 CTCCGTCAGGTCCTTGAGCAGGTGGGGGTTGACGATCTGGAACTCCCCCGACAGCACCCT 885762 Query 22486 GCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGC 22545 ||| ||| |||||| ||| | | |||| || || ||||| ||||| ||||| || Sbjct 885763 GCGCGTGTAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGC 885822 Query 22546 GGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAAT 22605 ||| || ||||| ||||| || |||| || || ||| |||| ||||||| | || Sbjct 885823 GGTGGAGGCGGTGGGCATGGGGGCCAGGAGCAGGCTGTTCCTCACGCCGTGCCGGGCGAT 885882 Query 22606 TTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATC 22665 | ||| ||| | |||||||||||| |||| |||||| || ||||||| || Sbjct 885883 CCTCTCCTTCAGCTGCTGCCAGTCCCACAGCTCGGTGGGCGTC---TTCCCCCACATGTC 885939 Query 22666 GTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATAT 22725 ||| || | ||||| || | ||| ||| ||||| | ||||| || || | | Sbjct 885940 GTACTGGAGGACGCCCTTGCTGACGGGGGAGCCCTCGTAGCTCTCGTAGGGGCCC-AGCT 885998 Query 22726 CG-CGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCT 22784 || |||| || | |||||| ||||||| || |||| || || ||||||||||| | Sbjct 885999 CGGCGGCCAGCTGGCAGCTGGCCTCCAGGGCCGCGTAGTAGATGGTCTCGAAGATCTGGG 886058 Query 22785 TGTTCAATTCGGC--GGCGGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTC 22842 |||||| | || || || ||| ||| |||| ||||| | | ||| ||||| Sbjct 886059 TGTTCA--GCAGCTGAGCCTCGGGGCTCTCGAACGGGTAGCGCATGAGGATGAAGGCGTC 886116 Query 22843 CGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTC 22902 ||||| ||||| ||||| || ||||| || |||| | || || | ||||| Sbjct 886117 CGCCAGCCCCTGGACGCCGATCCCGATGGGCCGGTGGCGCCTGTTGGAGCGCTCGGCCTC 886176 Query 22903 GGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGT 22962 ||||| || || | || ||||| | |||||| ||||||| ||| | || || Sbjct 886177 GGGCACCGGGTAGTAGTTGATGTCGATGATCTTGTTCAGGTTTCTGACCACCACCTTGGT 886236 Query 22963 TATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGATTGTACAACAAACTTGTTGACGGC 23022 | | |||||| | || | | || || |||||| || Sbjct 886237 CACGGCGGCCAGCTTGTGGAAGTCGAAGGTGCACTCGGGGGTGACGTACATGTTGAGCGC 886296 Query 23023 GATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGT 23082 ||| ||||| || ||||| |||||||||||||| || ||||| || || || || || Sbjct 886297 GATGGAGGCCAGGTTGCAGACGGCCACCTCGTCGCTGCTGGTGTATTCCACGATCTCCGT 886356 Query 23083 ACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGA 23142 || || ||||| | || || ||||||| || ||||||||| || | ||||| | Sbjct 886357 GCACAGGTTGCTGCTTTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGC 886416 Query 23143 ATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCA 23202 || ||||||||||||||||| ||||| || || ||| ||||||||||| || |||| Sbjct 886417 GTCTTTGTAGAGCATGTACGGGGTGCCGGTTTCCGTCTGGGACTCGATGATGGCGTGCCA 886476 Query 23203 CATAGTCTGAG-CGTGAACACGTCGCACGTACCTGCCTTCTTCCTCGTACTTTTGGTACA 23261 || ||| | | | | |||| ||| | | ||| || | |||||| ||| | Sbjct 886477 CACCTGCTGGGCCTTCACCACG-CGCTTGACGCGGCCCTCCTTCTCGTAGGAGGTGTAGA 886535 Query 23262 ACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGA 23321 | ||||| || | || | || ||| || |||||| ||| ||||||||| | Sbjct 886536 GCTTCTCAAACTCCTCCCCCCAGCACTCGTTCAAGCCGGGGCATTCGTCCGGACACATCA 886595 Query 23322 GACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGT 23381 || ||| || | || || | |||| || | || || ||||| || |||| Sbjct 886596 GAGACCAGTCCTGGTTGCTCTCCACCCTCTTCATGAACAAGTCGGGGATCCAGAGCGCGT 886655 Query 23382 AGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGT 23441 ||||||| || | ||| | | |||||| || || |||||||| |||| |||| |||| Sbjct 886656 AGAACAGGTCCCTGGCTCTCTGCTCCTCCTTCCCCGTGTTCTTCTTCAGCTCCAGGAAGT 886715 Query 23442 CCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGC 23501 | || ||||| ||||| ||||| ||||| | ||| || ||||| || | ||| || | Sbjct 886716 CAAAGACGTCGAAGTGCCAGGGCTCCAGGTACATGGCGAAGGCGCCGGGCCGCTTGTTCC 886775 Query 23502 CGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGT 23561 | ||||| || ||||| || |||||||||||||| ||||| ||||| ||||| || |||| Sbjct 886776 CTCCCTGGTCCACGTAGCGTGCCGTGTTGTTGTAAACTCTCAGCATGGGCACCAGGCCGT 886835 Query 23562 TGGACGCGCCGCCTACGCCCGCCA---CACTCGAACCTTTTGCTCGAACGTTGTGAACGT 23618 |||| |||| ||| || | |||| || | ||||| | | | ||| Sbjct 886836 TGGAGTGGCCGTTGGTGCCGGCGATGTAACTC---CCCGTGGCTCGGATGCAGCTGACGG 886892 Query 23619 GGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGA 23678 | || ||||| ||| |||| || || || | |||||| || || || |||||||| | Sbjct 886893 CCACGCCGATGCCCCCGGCCGACTTGGAGATGAGCGCGCACTGCTTGAGCGTGTCGTAAA 886952 Query 23679 TGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGG 23738 |||||||||||||||| || || | || | || ||| || |||| |||| | Sbjct 886953 TGCCCTCGATGCTGTCGTCCTTCATGGCCAGCAGGAAGCAGCTGGACAGCTGCGGCCGGT 887012 Query 23739 GCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGAT 23798 || | || ||| || || || |||||| || || | | ||||| || | Sbjct 887013 TGGTGCCTGCGTTGAAGAGCGTGGGCGAGGCGTGGGTGAACCACTTCTCCGACAGCAGGT 887072 Query 23799 TGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCA 23858 |||| || |||||||| || || ||||| | | ||| || |||| || ||| | ||||| Sbjct 887073 TGTAGGTTTCGATGGCCGCGTCGATGTCGTTTTGGTGGATGCCGACGGAGACCCTCATCA 887132 Query 23859 TCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCA 23918 ||||| || || | |||| || |||||| || || | ||| || || || | || Sbjct 887133 GCATGTGCTGCGGCCGCTCGGCCACTTTGCCGTTGATCTTCAGCAGGTAGGAGCGCTCCA 887192 Query 23919 TCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCA 23978 || || || || || ||| || ||| || || |||| | |||||||| |||| Sbjct 887193 GGGTCTTGAAGCCGAAGAAGTTGTACGAAAAATCGCGGTCGTAGATGATGGCCGAGTTCA 887252 Query 23979 AACGGT 23984 |||| Sbjct 887253 GGCGGT 887258 >seq14703 Length=1421099 Score = 129 bits (142), Expect = 5e-25 Identities = 122/156 (78%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 23340 TTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGC 23399 |||| || ||| ||||||| || || |||||||| | ||| ||||||| || | ||| | Sbjct 453017 TTTCCACTCGTTTCATAAAGAGGTCTGGTATCCACAAAGCAAAGAACAGGTCCCTGGCCC 452958 Query 23400 GCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCC 23459 | |||||||||||| |||||||| ||||| |||| ||||| || || || | ||||| Sbjct 452957 TCTGCTCCTCTTTGCCCGTGTTCTTCTTCAACTCCAGGAAGTCAAAAACATCGGAATGCC 452898 Query 23460 ACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCT 23495 ||||||| ||||| || || || || || ||||||| Sbjct 452897 ACGGCTCCAGGTACACAGCGAAGGCTCCAGGTCTCT 452862 Score = 113 bits (124), Expect = 4e-20 Identities = 122/162 (75%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 23043 CGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTA 23102 ||| ||||||||| ||| ||||| ||||| || || || || || ||||| || | | Sbjct 453460 CGGTCACCTCGTCCTTGCTGGTGTATTCTACGATCTCCGTGCACAGGTTGCTGCATCTGA 453401 Query 23103 TCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACG 23162 | ||||||| || ||||||||| || | ||||| | ||||||||||||||||||| Sbjct 453400 TGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTACG 453341 Query 23163 GCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACA 23204 ||||||| || || || ||||||||||| || ||||| Sbjct 453340 GCGTGCCTGTTTCCGTTTGGGACTCGATGATGGCGTACCACA 453299 >seq7053 Length=111041 Score = 98.7 bits (108), Expect = 9e-16 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || || |||||||| || || || ||||| |||||| |||||| || || || ||| || Sbjct 46849 GCCTTTGCCGCCGTGGAGGGAATCTTCTTCTCGGGCTCCTTTGCCGCCATCTTCTGGCTG 46908 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGAT 58087 ||||| || |||||||||||||||||||| || ||||||| |||| Sbjct 46909 AAGAAGCGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTGAT 46955 Score = 98.7 bits (108), Expect = 9e-16 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || || |||||||| || || || ||||| |||||| |||||| || || || ||| || Sbjct 51762 GCCTTTGCCGCCGTGGAGGGAATCTTCTTCTCGGGCTCCTTTGCCGCCATCTTCTGGCTG 51703 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGAT 58087 ||||| || |||||||||||||||||||| || ||||||| |||| Sbjct 51702 AAGAAGCGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTGAT 51656 Score = 98.7 bits (108), Expect = 9e-16 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || || |||||||| || || || ||||| |||||| |||||| || || || ||| || Sbjct 60683 GCCTTTGCCGCCGTGGAGGGAATCTTCTTCTCGGGCTCCTTTGCCGCCATCTTCTGGCTG 60624 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGAT 58087 ||||| || |||||||||||||||||||| || ||||||| |||| Sbjct 60623 AAGAAGCGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTGAT 60577 >seq3173 Length=1876 Score = 98.7 bits (108), Expect = 9e-16 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || || |||||||| || || || ||||| |||||| |||||| || || || ||| || Sbjct 468 GCCTTTGCCGCCGTGGAGGGAATCTTCTTCTCGGGCTCCTTTGCCGCCATCTTCTGGCTG 409 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGAT 58087 ||||| || |||||||||||||||||||| || ||||||| |||| Sbjct 408 AAGAAGCGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTGAT 362 >seq14557 Length=1650391 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || |||||||| |||||| | || || || || Sbjct 91053 CATGCAGATCTTCGTCAAGACCCTCACTGGCAAAACCATCACCCTTGAGGTGGAGCCCAG 90994 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | || || | || ||||||||||||| | || || || || Sbjct 90993 CGACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCA 90934 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || || |||||||| ||| ||||||| || || ||| || || Sbjct 90933 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAA 90874 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 ||| || || || || || || || || || || || ||||||| ||| Sbjct 90873 CATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGATTGAGGGGTGGT 90825 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || |||||||| |||||| |||| || || || Sbjct 91281 CATGCAGATCTTCGTCAAGACCCTCACTGGCAAAACCATCACCCTCGAGGTGGAGCCCAG 91222 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | || || | || ||||||||||||| | || || || || Sbjct 91221 TGACAACATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCA 91162 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || || |||||||| ||| | ||||| || || ||| || || Sbjct 91161 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTTGAAGATGGCCGCACCCTGTCCGACTACAA 91102 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || ||||| || || || || || || || | |||||||| || Sbjct 91101 CATCCAGAAAGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGAGG 91054 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/232 (68%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 ||| |||||| || || || ||||| || || |||||||| ||||| | || || || | Sbjct 91513 CAACCATGCAGATCTTTGTCAAGACCCTCACTGGCAAAACCATCACTCTTGAGGTGGAGC 91454 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 | ||||| | || | || || | || ||||||||||||| | || || | Sbjct 91453 CCAGCGACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTG 91394 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 | |||||| | || || || |||||||| ||| | ||||| || || ||| | Sbjct 91393 ATCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTTGAAGATGGCCGCACCCTGTCCGACT 91334 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 | ||||| || ||||| || || || || || || || | |||||||| || Sbjct 91333 ACAACATCCAGAAAGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGAGG 91282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445622790782160