Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq14537 338 8e-88 seq14703 102 1e-16 >seq14537 Length=2063196 Score = 338 bits (374), Expect = 8e-88 Identities = 1039/1599 (65%), Gaps = 11/1599 (1%) Strand=Plus/Plus Query 65457 CAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGT 65516 || || ||||| | || |||| || ||||| |||||||||| | || || || Sbjct 886013 CAGCTGGCCTCCAGGGCCGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAGCAGCTGA 886072 Query 65517 GCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACA 65576 || || |||| || || || || | ||| || || ||||| || | || || || Sbjct 886073 GCCTCGGGGCTCTCGAACGGGTAGCGCATGAGGATGAAGGCGTCCGCCAGCCCCTGGACG 886132 Query 65577 CCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAA 65636 || || ||||| || | || | | | || ||| || || || || | || || || Sbjct 886133 CCGATCCCGATGGGCCGGTGGCGCCTGTTGGAGCGCTCGGCCTCGGGCACCGGGTAGTAG 886192 Query 65637 TTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTG 65696 || || || || || || || || |||||||| | || ||| ||| | ||| ||| Sbjct 886193 TTGATGTCGATGATCTTGTTCAGGTTTCTGACCACCACCTTGGTCACGGCGGCCAGCTTG 886252 Query 65697 AGAAAATCAAAT---CGCTCATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTA 65753 | || || || | ||| | || ||||||| | || | || ||||| || Sbjct 886253 TGGAAGTCGAAGGTGCACTCGGGGGTGACGTACATGTTGAGCGCGATGGAGGCCAGGTTG 886312 Query 65754 CAAACGGCTACCTCATTAGCATCCGCA-TATTGTATTATCTCAGTGCAAAGATTACTACA 65812 || ||||| ||||| | || | | |||| | ||||| ||||| || || || | Sbjct 886313 CAGACGGCCACCTCGTC-GCTGCTGGTGTATTCCACGATCTCCGTGCACAGGTTGCTGCT 886371 Query 65813 CTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAAT 65872 |||||||| || | || || || || ||||| |||| || || || || || || || Sbjct 886372 TTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTAGAGCAT 886431 Query 65873 GAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTT 65932 | | || || || ||||| |||| || || || || || | ||| || | ||||| Sbjct 886432 GTACGGGGTGCCGGTTTCCGTCTGGGACTCGATGATGGCGTGCCACACCTGCTGGGCCTT 886491 Query 65933 TATTATAGATTTGTATCTCTTTTCTCTTTCGTATA--GTGTATACAATCGTTCGAACTCG 65990 | | ||| | || | ||||| ||||| | || || ||||| Sbjct 886492 CACCACGCGCTTGACGCGGCCCTCCTTCTCGTAGGAGGTGTAGAGCTTC--TCAAACTCC 886549 Query 65991 TCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCG 66050 || ||||| | || ||| || || ||||| ||||||||||||| ||||| || | Sbjct 886550 TCCCCCCAGCACTCGTTCAAGCCGGGGCATTCGTCCGGACACATCAGAGACCAGTCCTGG 886609 Query 66051 TCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTG 66110 | || ||| | ||||| || | || || ||||| || || || | || ||| Sbjct 886610 TTGCTCTCCACCCTCTTCATGAACAAGTCGGGGATCCAGAGCGCGTAGAACAGGTCCCTG 886669 Query 66111 GTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAA 66170 | ||| || ||||| || || || ||||| || || || ||||| | | | || | Sbjct 886670 GCTCTCTGCTCCTCCTTCCCCGTGTTCTTCTTCAGCTCCAGGAAGTCAAAGACGTCGAAG 886729 Query 66171 TGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATG 66230 ||||| || |||| ||| ||||| | | || ||||| ||||| |||||||| || | | Sbjct 886730 TGCCAGGGCTCCAGGTACATGGCGAAGGCGCCGGGCCGCTTGTTCCCTCCCTGGTCCACG 886789 Query 66231 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTG 66290 || | || ||||| || |||||||||| ||| || | | || ||||| || ||| Sbjct 886790 TAGCGTGCCGTGTTGTTGTAAACTCTCAGCATGGGCACCAGGCCGTTGGAGTGGCCGTTG 886849 Query 66291 GTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCT 66350 || |||| ||| || || || | || || || || | | | || || ||||| Sbjct 886850 GTGCCGGCGATGTAACTCCCCGTGGCTCGGATGCAGCTGACGGCCACGCCGATGCCCCCG 886909 Query 66351 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCA 66410 ||| || ||||| | ||||| | || | ||| || || |||||||| || || || Sbjct 886910 GCCGACTTGGAGATGAGCGCGCACTGCTTGAGCGTGTCGTAAATGCCCTCGATGCTGTCG 886969 Query 66411 TCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAAT 66470 ||| ||||| || || || ||||| |||| || | || | || || || || || Sbjct 886970 TCCTTCATGGCCAGCAGGAAGCAGCTGGACAGCTGCGGCCGGTTGGTGCCTGCGTTGAAG 887029 Query 66471 AAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCT 66530 | || || || ||||| || ||||| || || || || || ||||| || || || || Sbjct 887030 AGCGTGGGCGAGGCGTGGGTGAACCACTTCTCCGACAGCAGGTTGTAGGTTTCGATGGCC 887089 Query 66531 GAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTT 66590 | ||| || || ||| || || || || | ||| | ||| | ||||||||| || | Sbjct 887090 GCGTCGATGTCGTTTTGGTGGATGCCGACGGAGACCCTCATCAGCATGTGCTGCGGCCGC 887149 Query 66591 TCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAA 66650 || | | ||| ||| || |||| || |||||| |||| || || || || || Sbjct 887150 TCGGCCACTTTGCCGTTGATCTTCAGCAGGTAGGAGCGCTCCAGGGTCTTGAAGCCGAAG 887209 Query 66651 TAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTG 66710 ||||||| ||||| || || ||||| || || ||||||| || || | | | Sbjct 887210 AAGTTGTACGAAAAATCGCGGTCGTAGATGATGGCCGAGTTCAGGCGGTCTCTGTTCTGC 887269 Query 66711 TTAACTACATCCATGGTAATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATT 66769 || | |||| || | ||| || | || || || || || ||| || || Sbjct 887270 AGGACGATGTCCAGCGT-CTCCTTGGAGACCATGGGGGAGTGGCACCTGTTTAAGGGGTT 887328 Query 66770 GACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAG 66829 ||| |||||| | | ||||||||||| || || || | || || || |||||||| || Sbjct 887329 GACGTAGTTGTACAGGTCCTCCATCACCTCGCTGAACACCTTCTTGGTCTCTTTGTGCAG 887388 Query 66830 ATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACAAGT 66889 || || ||||| || | || || | ||||| || || || || | || || || Sbjct 887389 GTTGGAGACGGCAATCCGCGCAGCCAGGATGGCGTAGTCGGGGTGCTTGGTGGTCAGGGT 887448 Query 66890 GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCC 66949 ||| | || || || ||||| ||||||| || ||||| || || || | || | || Sbjct 887449 GGCGGAGATCTCCGCCGCCAGCGTGTCCAGCTCCACCGTGGTGACCCCGCTGTACAGACC 887508 Query 66950 TTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACA 67009 ||||| |||||||| | || | | || || | | |||| ||| | ||| || || Sbjct 887509 CTGGATCACCTTCATGGTGATCTGAGCCGGGTCCACAAAGTCAGCGTTCAGGCCGTAGCA 887568 Query 67010 TAATTTTCTAATACGAGATGTGATTTTATCAAACATGAC 67048 | || || || || |||||||| || |||||||| Sbjct 887569 CAGCTTCTGGATGCGGGAGGTGATTTTGTCGAACATGAC 887607 Score = 102 bits (112), Expect = 1e-16 Identities = 125/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 64906 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 64965 |||| ||||| || ||||| || || |||||| || | || ||||| || ||||| | Sbjct 885373 TCCAGCCGTAGAAGTGCATGCTGGTCAGTTTGCCGTAGTTGGGCTCTGCGATGTGGATGT 885432 Query 64966 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 65025 ||||||| || || || ||||||||||| || | ||| || ||||| || |||| ||||| Sbjct 885433 TCATAGACTGGCTCTGGTCGATGAAGGCGCCGCGGTCGGCCGCCATCTTGATGACCGTCT 885492 Query 65026 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 65076 | || | || ||||| | || || || | |||| | ||| | ||||| Sbjct 885493 TCTGGGAGATCTCCCACACCGTCTTGTACAGCTGCTTCACATCGTTTGGAA 885543 >seq14703 Length=1421099 Score = 102 bits (112), Expect = 1e-16 Identities = 124/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 64906 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 64965 |||| || ||||| ||||| || || |||||| || | || ||||| || ||||| | Sbjct 454816 TCCAGCCATAAAAGTGCATGCTGGTCAGTTTGCCGTAGTTGGGCTCTGCGATGTGGATGT 454757 Query 64966 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 65025 | | || || || |||||||||||||| || | |||||| ||||| || | || |||| Sbjct 454756 TGAGCGACTGGCTCTGATCGATGAAGGCGCCGCGGTCTGCTGCCATCTTGAGGACGGTCT 454697 Query 65026 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGG 65074 | || | |||||||| | ||||||||| | |||| | ||| || || Sbjct 454696 TCTGGGAGATTTCCCACACAGTTTTATACAGCTGCTTCAGATCGTCAGG 454648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657960761405320