Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq14537 315 1e-80 seq7053 120 4e-22 seq3173 120 4e-22 seq14703 98.7 1e-15 >seq14537 Length=2063196 Score = 315 bits (348), Expect = 1e-80 Identities = 1036/1600 (65%), Gaps = 13/1600 (1%) Strand=Plus/Plus Query 79336 CAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGT 79395 || || ||||| | || |||| || ||||| ||||| |||| | || || || Sbjct 886013 CAGCTGGCCTCCAGGGCCGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAGCAGCTGA 886072 Query 79396 GCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACA 79455 || || |||| || || || || | ||| || || ||||| || | || || || Sbjct 886073 GCCTCGGGGCTCTCGAACGGGTAGCGCATGAGGATGAAGGCGTCCGCCAGCCCCTGGACG 886132 Query 79456 CCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAA 79515 || || ||||| || | || | | | || || || || || || | || || || Sbjct 886133 CCGATCCCGATGGGCCGGTGGCGCCTGTTGGAGCGCTCGGCCTCGGGCACCGGGTAGTAG 886192 Query 79516 TTAATATCTATAATTTTATTGAGATTCCTGACTATTACTTTGACCACATCCTTTAGTTTG 79575 || || || || || || || || || ||||| | || ||| ||| | || ||| Sbjct 886193 TTGATGTCGATGATCTTGTTCAGGTTTCTGACCACCACCTTGGTCACGGCGGCCAGCTTG 886252 Query 79576 AGAAAATCAAATCGTCCA-TCTA---TTACAAACATGTTCAACGCGACAGATGCCAGATT 79631 | || || || || || || | || ||||||| | ||||| || ||||| || Sbjct 886253 TGGAAGTCGAAG-GTGCACTCGGGGGTGACGTACATGTTGAGCGCGATGGAGGCCAGGTT 886311 Query 79632 ACAAACGGCTACCTCATTAGCATCCGCA-TATTGTATTATTTCAGTGCAGAGGTTACTAC 79690 || ||||| ||||| | || | | |||| | || || ||||| ||||| || | Sbjct 886312 GCAGACGGCCACCTCGTC-GCTGCTGGTGTATTCCACGATCTCCGTGCACAGGTTGCTGC 886370 Query 79691 ACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 79750 || ||||| || | || || || || ||||| |||| || || || || || || | Sbjct 886371 TTTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTAGAGCA 886430 Query 79751 TGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 79810 || |||| || || ||||| |||| || || || || || | ||| || | |||| Sbjct 886431 TGTACGGGGTGCCGGTTTCCGTCTGGGACTCGATGATGGCGTGCCACACCTGCTGGGCCT 886490 Query 79811 TTATTATAGACTTGTATCTCTTTTCTCTTTCGTATT--GTGTATATAATCGTTCGAACTC 79868 | | | |||| | || | ||||| ||||| | || || ||||| Sbjct 886491 TCACCACGCGCTTGACGCGGCCCTCCTTCTCGTAGGAGGTGTAGAGCTTC--TCAAACTC 886548 Query 79869 GTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCC 79928 || ||||| |||| || || || |||||||| |||||||||| ||||| || Sbjct 886549 CTCCCCCCAGCACTCGTTCAAGCCGGGGCATTCGTCCGGACACATCAGAGACCAGTCCTG 886608 Query 79929 ATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 79988 | || || | ||||| || | || || ||||| || || || || || || Sbjct 886609 GTTGCTCTCCACCCTCTTCATGAACAAGTCGGGGATCCAGAGCGCGTAGAACAGGTCCCT 886668 Query 79989 GGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 80048 || ||| |||||||| || || || ||||| || || || ||||| | | | || | Sbjct 886669 GGCTCTCTGCTCCTCCTTCCCCGTGTTCTTCTTCAGCTCCAGGAAGTCAAAGACGTCGAA 886728 Query 80049 ATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTAT 80108 ||||| || |||| ||| ||||| | | || || || ||||| |||||||| || | Sbjct 886729 GTGCCAGGGCTCCAGGTACATGGCGAAGGCGCCGGGCCGCTTGTTCCCTCCCTGGTCCAC 886788 Query 80109 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATT 80168 ||| | || ||||| || |||||||||| ||| || | | || ||||| || || Sbjct 886789 GTAGCGTGCCGTGTTGTTGTAAACTCTCAGCATGGGCACCAGGCCGTTGGAGTGGCCGTT 886848 Query 80169 GGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCC 80228 ||| |||| ||| || || || |||| || || || | | | || || ||||| Sbjct 886849 GGTGCCGGCGATGTAACTCCCCGTGGCTCGGATGCAGCTGACGGCCACGCCGATGCCCCC 886908 Query 80229 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATC 80288 ||| || ||||| | ||||| | || | ||| || || |||||||| ||||| || Sbjct 886909 GGCCGACTTGGAGATGAGCGCGCACTGCTTGAGCGTGTCGTAAATGCCCTCGATGCTGTC 886968 Query 80289 ATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAA 80348 || ||||| || || || ||||| |||| || | || | || || || || || Sbjct 886969 GTCCTTCATGGCCAGCAGGAAGCAGCTGGACAGCTGCGGCCGGTTGGTGCCTGCGTTGAA 887028 Query 80349 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGC 80408 | || || || ||||| || ||||| || || ||||| || ||||| || || || || Sbjct 887029 GAGCGTGGGCGAGGCGTGGGTGAACCACTTCTCCGACAGCAGGTTGTAGGTTTCGATGGC 887088 Query 80409 TGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCT 80468 | || || || ||| || || || || | ||| | ||| | ||||||||| || | Sbjct 887089 CGCGTCGATGTCGTTTTGGTGGATGCCGACGGAGACCCTCATCAGCATGTGCTGCGGCCG 887148 Query 80469 TTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAA 80528 || | | ||| || || |||| || ||| || |||| || || || || || Sbjct 887149 CTCGGCCACTTTGCCGTTGATCTTCAGCAGGTAGGAGCGCTCCAGGGTCTTGAAGCCGAA 887208 Query 80529 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTT 80588 ||||||| ||||| || || ||||| || || ||||||| || || | | | Sbjct 887209 GAAGTTGTACGAAAAATCGCGGTCGTAGATGATGGCCGAGTTCAGGCGGTCTCTGTTCTG 887268 Query 80589 GTTAACTACATCCATGGTGATACTTGAA-ATAATCGGAGAATGTTTCCCATTTTTAGGAT 80647 || | |||| || | |||| | | || || || || || ||| || | Sbjct 887269 CAGGACGATGTCCAGCGTC-TCCTTGGAGACCATGGGGGAGTGGCACCTGTTTAAGGGGT 887327 Query 80648 TAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTA 80707 | || |||||| | | ||||||||||| || || || | || || || || ||||| | Sbjct 887328 TGACGTAGTTGTACAGGTCCTCCATCACCTCGCTGAACACCTTCTTGGTCTCTTTGTGCA 887387 Query 80708 GATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTTGTGTAGTACAAG 80767 | || || ||||| || | || || | ||||| || || || || | || || | Sbjct 887388 GGTTGGAGACGGCAATCCGCGCAGCCAGGATGGCGTAGTCGGGGTGCTTGGTGGTCAGGG 887447 Query 80768 TGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTC 80827 |||| | || || || ||||| ||||||| || ||||| || || || | || | | Sbjct 887448 TGGCGGAGATCTCCGCCGCCAGCGTGTCCAGCTCCACCGTGGTGACCCCGCTGTACAGAC 887507 Query 80828 CTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAAC 80887 | ||||| |||||||| | || | | || || | | |||| ||| | ||| || | Sbjct 887508 CCTGGATCACCTTCATGGTGATCTGAGCCGGGTCCACAAAGTCAGCGTTCAGGCCGTAGC 887567 Query 80888 ATAATTTTCTAATACGAGACGTGATTTTATCAAACATGAC 80927 | | || || || || |||||||| || |||||||| Sbjct 887568 ACAGCTTCTGGATGCGGGAGGTGATTTTGTCGAACATGAC 887607 Score = 105 bits (116), Expect = 1e-17 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 78785 TCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 78844 |||| |||||||| ||||| || || |||||| || | || ||||| || ||||| | Sbjct 885373 TCCAGCCGTAGAAGTGCATGCTGGTCAGTTTGCCGTAGTTGGGCTCTGCGATGTGGATGT 885432 Query 78845 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 78904 ||||||| || || || ||||||||||| || | ||| || ||||| || |||| ||||| Sbjct 885433 TCATAGACTGGCTCTGGTCGATGAAGGCGCCGCGGTCGGCCGCCATCTTGATGACCGTCT 885492 Query 78905 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 78955 | || | || ||||| | || || || | |||| | ||| | ||||| Sbjct 885493 TCTGGGAGATCTCCCACACCGTCTTGTACAGCTGCTTCACATCGTTTGGAA 885543 >seq7053 Length=111041 Score = 120 bits (132), Expect = 4e-22 Identities = 108/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 |||||||||| || || || |||||||| || || || |||||||| ||||| ||||| | Sbjct 46969 CCTCGTCTCTGCTGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCGCTTCT 46910 Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101 | ||||| || |||| ||||| || || || ||||||||||| || || |||||||||| Sbjct 46909 TCAGCCAGAAGATGGCGGCAAAGGAGCCCGAGAAGAAGATTCCCTCCACGGCGGCAAAGG 46850 Query 50102 CAACAAGTCTCTCTCC 50117 | || | | |||||| Sbjct 46849 CCACCACGCGCTCTCC 46834 Score = 120 bits (132), Expect = 4e-22 Identities = 108/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 |||||||||| || || || |||||||| || || || |||||||| ||||| ||||| | Sbjct 51642 CCTCGTCTCTGCTGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCGCTTCT 51701 Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101 | ||||| || |||| ||||| || || || ||||||||||| || || |||||||||| Sbjct 51702 TCAGCCAGAAGATGGCGGCAAAGGAGCCCGAGAAGAAGATTCCCTCCACGGCGGCAAAGG 51761 Query 50102 CAACAAGTCTCTCTCC 50117 | || | | |||||| Sbjct 51762 CCACCACGCGCTCTCC 51777 Score = 120 bits (132), Expect = 4e-22 Identities = 108/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 |||||||||| || || || |||||||| || || || |||||||| ||||| ||||| | Sbjct 60563 CCTCGTCTCTGCTGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCGCTTCT 60622 Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101 | ||||| || |||| ||||| || || || ||||||||||| || || |||||||||| Sbjct 60623 TCAGCCAGAAGATGGCGGCAAAGGAGCCCGAGAAGAAGATTCCCTCCACGGCGGCAAAGG 60682 Query 50102 CAACAAGTCTCTCTCC 50117 | || | | |||||| Sbjct 60683 CCACCACGCGCTCTCC 60698 >seq3173 Length=1876 Score = 120 bits (132), Expect = 4e-22 Identities = 108/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 |||||||||| || || || |||||||| || || || |||||||| ||||| ||||| | Sbjct 348 CCTCGTCTCTGCTGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCGCTTCT 407 Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101 | ||||| || |||| ||||| || || || ||||||||||| || || |||||||||| Sbjct 408 TCAGCCAGAAGATGGCGGCAAAGGAGCCCGAGAAGAAGATTCCCTCCACGGCGGCAAAGG 467 Query 50102 CAACAAGTCTCTCTCC 50117 | || | | |||||| Sbjct 468 CCACCACGCGCTCTCC 483 >seq14703 Length=1421099 Score = 98.7 bits (108), Expect = 1e-15 Identities = 123/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 78785 TCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 78844 |||| || || || ||||| || || |||||| || | || ||||| || ||||| | Sbjct 454816 TCCAGCCATAAAAGTGCATGCTGGTCAGTTTGCCGTAGTTGGGCTCTGCGATGTGGATGT 454757 Query 78845 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 78904 | | || || || |||||||||||||| || | |||||| ||||| || | || |||| Sbjct 454756 TGAGCGACTGGCTCTGATCGATGAAGGCGCCGCGGTCTGCTGCCATCTTGAGGACGGTCT 454697 Query 78905 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGG 78953 | || | |||||||| | ||||||||| | |||| | ||| || || Sbjct 454696 TCTGGGAGATTTCCCACACAGTTTTATACAGCTGCTTCAGATCGTCAGG 454648 Score = 91.5 bits (100), Expect = 2e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 79939 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 79998 ||||||||||||||||| || || ||||| | ||| | || || || |||| || ||| Sbjct 453012 ACTCGTTTCATAAAGAGGTCTGGTATCCACAAAGCAAAGAACAGGTCCCTGGCCCTCTGC 452953 Query 79999 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 80058 ||||| || || || ||||| || | || ||||| | | || ||| ||||||||||| Sbjct 452952 TCCTCTTTGCCCGTGTTCTTCTTCAACTCCAGGAAGTCAAAAACATCGGAATGCCACGGC 452893 Query 80059 TCCAAGTA 80066 |||| ||| Sbjct 452892 TCCAGGTA 452885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718037400727720